Crassostrea virginica (eastern oyster): 111108704
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Entry
111108704 CDS
T09197
Name
(RefSeq) neurogenic locus notch homolog protein 1-like isoform X1
KO
K20994
Notch 2
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111108704
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
EGF
hEGF
EGF_2
EGF_Teneurin
EGF_3
SEA
EGF_CA
Plasmod_Pvs28
cEGF
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
111108704
NCBI-ProteinID:
XP_022300450
UniProt:
A0A8B8BAJ7
LinkDB
All DBs
Position
8:complement(47008595..47026375)
Genome browser
AA seq
2176 aa
AA seq
DB search
MTRTKLIYLILFSIFATKFAVGKITFFIHIDEVHSHKTLHGGSCCQGVTGTLCTKLCKPV
LTICLKDRNHQCVSSFTSTLDMAREDVVYGSKVGNTTNPQFLEVDNWSKYMDKISVVVQD
LQTTSTPLIYQTEFNDYNLKIGDNILSQNWGQKKLKASFFKDRNRFSIKITYKAYCSEGY
YGPSCTDFCPNNQKKCVVNGHEYCKMGWQGNNCDQDVNECNDRHFCSNGKCTNTVGSFNC
TCPPSVYGLKCQLDEDECLLNPCNGGECVNTVGSYNCSCKSGTTGKNCETLTSTSCTGVV
CSNHGNCTIHNHRPVCNCDKGFSGTDCSVTDFCANNLCKHGSTCVIGESDYSCYCAKGYM
GKYCEEMDFCASGPCEHSGKCTNNASNFSCSCVNNYMGPTCKIYNYCAGKSCQGHGICVL
ESNGYHCNCTGGYSGKDCDTVRHCFGKNCNNHGRCVEVNGGYNCQCNAEFKGKDCEIRDY
CHGQSCSQRGVCNLLSHGYECRCRNGFLGKNCEHDYCFNNTCQHGSTCVSGSTNFTCQCP
SSYTGPFCETRNYCHGQLCSNQGQCQNGENNYTCHCQSGYLGTNCEIIDYCHSNPCVHGT
CTNTNTGYTCSCRGGYTGARCDKVDHCYNKHCSSHGTCHNNLENYACRCNNGYIGKDCEI
VDYCYNQNCSHNGTCHNQQSSYKCTCNAGHTGTDCEQTYCQNNKCQHNSTCINGLSNYTC
KCVPGYKDNLCQTRDFCYNQKCSGHGTCQNEASGYTCRCYAEYLGNDCELDHCSSHPCKN
GATCVNRANSFICSCPAEFLGILCETRNFCHDKTCSNHGNCQNGNLNYTCHCNGDYFGTN
CENVDYCHNKDCSGQGTCHNQHNTYKCSCSPGYTGSDCQHTYCHNNGCQHGATCVNRHTN
YTCTCTPGFIGTFCQTQDFCHNQNCSGRGTCQNGRSNYTCTCNAGYLGKNCEHDHCYSHP
CKNGATCKNEANNFSCACPPEYYGTLCEKRDFCHGQNCSSHGDCKNGKLNYTCHCNGGYI
GTNCENVDHCFNKDCSHKGTCHNQLTTYKCSCNPGHTGTDCQHTYCHDNGCQHGASCVNG
YSNYTCTCAPGYMGNLCQTQDFCHNQKCSGRGSCQNGGSRYTCTCNAGYVGKNCEHDHCF
NHPCQNGAICVIKPNNFTCFCPPEYQGKLCETRDFCYGQTCNSNGNCQNGKLNYTCQCQP
QYTGANCEQRNYCSSKPCRHGKCTNTKAGFHCSCSGGYTGSSCEVVDHCYNQNCSDHGSC
QNNGYNYTCHCNGGFIGTNCETTDYCYNKDCSLHGICHNQHNTYNCSCSPGYIGTDCQHT
YCHNNECQNGASCVNGHSNYTCTCATGYKGSLCQTPDFCYNQNCSGKGTCHNEEHNYMCN
CSPGFLGKNCEHDYCFNHTCQNGGTCFSGTNNFTCSCPPEYQGTFCEIRDFCRGQTCSNN
GDCQNGKLNYACNCQPEFTGINCEQRNYCNSNPCKNGTCSNTKTSFQCSCPAGYTGKTCE
SVNYCNNKHCSNHGTCHNDDHSYECDCDDGYLGQNCELIDFCHNETCNGQGNCSVLENGF
VCHCKSGFNGKNCEKKDVCFFNPCENGGVCKTTDNSFTCVCPSGFQGENCTVTKHCINKT
CSDHGTCFELPGDYHCNCSGGFSGRNCEIQDFCFQQNCSGYGTCHNVKEGFECKCNPGSK
GRLCDEIDFCHNLTCKNGTCVSHKFQAVCKCFEGYHGKNCEHFDFCSSHPCRNGASCNNG
ATFFNCSCKEGFIGDQCELQDPCFLQTCSKHGTCKVISGNTYACDCDRNFIGKNCEITTT
IPPNSGISTNTNYSTITTVANSISTKSNTSAQSSTKSTHLPEHTKHDITSVPSENVTRQP
YSTSNTVSSRVNHTAMSNMSTQEPKKSTVTQTIGVSKGQSTVHRTTVETTSALASSSISL
TTNSIPEPTEVIFEGKIKFAVDWHPALENKNSEEYKNVSANFLALMAAVYEKGELKEVYM
KTEIISITEGSIDVKYNQTFKHPEIDLANGTVIEVSNATVIDSFEKGIKELEEESPTNSD
FIQDLVQTFNITHARMELRELVRPPRTTTTLSSSTLTARKTTTSLEVTKTPKNDKTWLDD
HLTTVIGASAGAVVLLMILGFIVRTVRRRHREKELLWDDDINMEPTFSKFDTDEQALSAT
NPTYTYNGGKLEINSP
NT seq
6531 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggactaaattaatttaccttatactgtttagtatatttgcaactaagtttgca
gttggaaagattacctttttcatccacatcgacgaagtgcatagtcataaaacactacat
ggcgggagctgttgccagggggttactggaaccttatgtactaaactgtgtaagcctgtc
ctcacaatatgcctcaaagacagaaaccatcaatgtgtatccagttttacctctacgttg
gacatggcacgtgaagatgttgtttatggatccaaagttggcaataccacaaatccccaa
ttcttagaagttgataactggagtaaatacatggacaagataagtgtcgtggtgcaggac
ttgcaaaccacctctacacccctcatttaccagacggagtttaacgactacaacctgaaa
attggagacaacatactttctcaaaactggggacagaaaaagttgaaagcttcttttttc
aaagatagaaaccgttttagcattaagattacctataaggcatattgttctgagggttac
tatggtccaagctgcactgacttctgtccaaacaatcagaagaaatgtgtcgtgaatggt
catgaatattgcaaaatggggtggcagggtaacaactgtgaccaggacgtcaacgaatgc
aatgatagacacttttgtagtaatggtaaatgtactaacactgtcggaagtttcaattgt
acctgtccgccgtctgtgtacggtctgaagtgtcagctggacgaagatgagtgtttgttg
aatccatgtaatggaggagagtgcgtcaatacagtgggaagttataactgtagctgtaag
agtggaacaacaggcaaaaactgcgaaactctgacgagtactagttgtacaggagtagta
tgtagtaaccatggtaattgtacaatccacaatcataggccagtctgtaactgtgacaaa
ggattctctggaacggactgctctgtaactgatttctgtgcgaataatttatgcaaacat
ggatcaacgtgtgttataggggaatcagactactcatgttactgtgccaaaggatatatg
gggaaatattgtgaagaaatggatttttgtgccagtggaccatgtgaacactctggaaaa
tgtacaaacaatgcgtctaatttttcatgcagttgcgtcaataattatatgggaccaaca
tgcaaaatttacaattattgtgctggaaaatcgtgccaaggacatggaatatgtgttcta
gaaagtaatggctaccattgtaattgcactggaggatacagtggtaaagactgtgatacc
gtacgtcattgctttgggaaaaattgtaacaatcatggaagatgtgtggaggtaaatggt
ggatacaattgtcaatgtaatgctgagtttaaaggtaaagattgtgagataagagattat
tgtcatggacagagctgttctcaaagaggggtgtgtaatttacttagtcacggctatgaa
tgcaggtgtagaaatggttttttgggaaaaaattgtgagcatgactattgctttaataat
acatgccagcatgggtctacttgtgtgagtggatcgacaaactttacttgtcagtgccct
tcatcttacacgggacccttttgcgaaacgcgtaattattgccacggacaactttgcagt
aatcaaggacaatgtcaaaacggggaaaacaattatacttgtcattgtcaatcaggatat
cttggaacgaattgtgaaataatagattattgtcacagtaatccgtgtgtccacggaacg
tgcacaaatacaaatacgggatacacgtgttcttgtcgtggtggatatacgggagctaga
tgtgataaggttgaccattgctataacaaacactgctcgagtcatggaacatgccacaac
aatttggagaattacgcttgtcgctgtaacaatggttatattggaaaagactgtgaaata
gttgactattgctataaccagaactgttctcataatggaacatgtcataaccaacaaagt
tcttacaaatgcacatgtaacgcgggacatactggaacggactgcgaacaaacatactgt
cagaataataaatgtcaacataattccacgtgtatcaatggactctccaactacacgtgt
aaatgtgtaccaggttacaaggataatttatgtcaaactagggatttctgttataatcag
aaatgctcagggcatggtacatgtcaaaatgaagcatctggctatacatgtagatgttat
gcagaatatttagggaatgattgcgaacttgaccactgctctagtcatccatgtaaaaat
ggcgccacttgtgtcaacagagcaaacagctttatttgttcctgtcctgcagaatttttg
ggtatattatgtgaaacacgtaatttttgtcatgacaaaacctgcagtaaccatggaaat
tgtcagaatggaaatctgaattatacttgtcattgtaacggtgattattttggaacaaat
tgtgaaaatgttgattattgtcataacaaagactgttctggtcaaggcacatgtcacaac
caacacaacacgtacaaatgttcatgtagtccgggatacacaggtagtgactgccagcac
acttactgtcacaataatggatgccaacatggcgccacctgtgtcaatagacacactaac
tacacgtgtacatgtacaccaggatttataggcactttttgtcaaacgcaggatttttgt
cacaatcagaattgctccggacgtggtacttgtcaaaatggaagatcaaattacacatgt
acatgtaatgctgggtatctagggaaaaactgcgaacatgaccactgttatagccatcca
tgtaaaaatggcgccacttgtaaaaacgaagcaaacaacttctcttgtgcctgtcctcca
gaatattatggtacactgtgtgagaaacgtgatttttgtcacgggcaaaactgcagcagc
catggtgattgcaagaatggaaaactgaattatacttgtcattgtaacggtggttatatt
ggaacaaactgtgaaaatgttgaccattgctttaacaaggattgttctcacaaaggcaca
tgtcataaccaactcacaacgtacaaatgttcatgtaatccgggacacacaggtactgac
tgccagcatacttactgtcacgataatggatgccaacatggtgcctcctgtgtcaatgga
tactctaactacacgtgtacatgtgcaccaggatatatgggtaatttatgtcaaacacag
gatttttgtcacaatcagaaatgctcagggcgtggttcttgtcaaaatggaggatctagg
tacacatgtacatgtaatgcaggatatgtagggaagaactgcgaacatgaccactgtttt
aaccatccatgtcaaaatggcgccatttgtgtcatcaagccaaacaacttcacttgtttc
tgtccaccagaataccagggaaaactgtgtgaaacacgtgatttttgttacggccaaacc
tgcaacagcaacggaaattgccaaaatggaaagctgaattatacttgtcaatgtcaacca
caatataccggagcaaactgtgaacagagaaattactgtagtagtaagccatgtaggcat
ggaaagtgtacgaatacaaaagcaggctttcattgttcttgttcaggaggatataccggt
tcatcgtgtgaagtagtcgaccattgctataatcagaactgttcggatcatggaagttgt
cagaacaatggttacaattatacatgtcattgtaacggtggttttattggaacaaactgt
gaaacgactgattattgctataacaaggactgttcccttcacggcatatgtcacaaccaa
cacaacacgtacaattgttcatgtagtccgggatacataggtactgactgccagcatact
tactgtcacaataatgaatgccaaaatggtgcctcctgtgtcaatggacattctaactac
acgtgtacatgtgcaacaggatataaagggagcttatgtcaaacacccgacttttgttat
aatcagaattgttcaggaaaagggacttgtcataatgaagaacataattacatgtgtaat
tgttctcccggatttctaggaaagaattgcgagcatgattactgttttaatcatacatgt
caaaatggcggcacttgttttagcggaacaaataacttcacttgttcctgtcctccagaa
tatcagggtacattttgtgagatacgtgatttttgtcgcggtcaaacctgcagcaacaac
ggtgattgtcaaaatggaaaactaaattatgcttgtaattgtcaaccagagtttaccggg
ataaactgtgaacaaagaaactactgcaatagcaatccttgtaagaatggaacatgttca
aataccaagaccagcttccaatgctcttgtccagcaggatataccggtaaaacttgtgaa
agtgttaactattgcaataacaaacactgctcgaatcatggaacgtgccataacgatgat
cacagttatgagtgtgattgtgacgatggataccttggacaaaattgcgagttgatagat
ttttgtcataatgaaacatgtaacgggcagggcaactgtagtgttttggaaaatggattc
gtgtgtcattgcaaatctggattcaatgggaaaaattgtgaaaagaaagatgtttgtttc
tttaatccatgtgaaaacggaggagtttgtaagacaacagacaatagcttcacgtgcgtt
tgtccatcaggctttcaaggagaaaactgcacagttacgaaacattgcattaacaaaaca
tgtagcgatcacgggacctgttttgaattacctggagattatcattgtaactgcagtggt
ggattttctggacgaaattgcgagattcaagacttttgcttccagcagaactgcagtggt
tatggaacatgtcacaatgtaaaagagggctttgaatgcaaatgcaatcccggttctaag
gggcgcctttgtgatgagatcgatttttgtcataacttaacatgcaaaaatggaacatgt
gtaagtcataaatttcaggcagtgtgcaagtgttttgaaggatatcatggtaaaaactgc
gaacactttgatttttgcagcagccatccgtgtcggaatggtgcttcgtgcaataatgga
gcgacgtttttcaattgttcttgtaaagaaggatttattggagaccaatgtgaattacaa
gacccctgttttcttcaaacatgcagtaaacatggtacatgcaaagtcatttctggtaac
acttacgcctgtgattgtgatagaaattttatcggaaaaaattgtgaaataacgacaaca
attccaccaaattctggaatatcaacaaatactaattattcaacaattacaacagtagca
aatagcatttcaacaaaatcgaatacgtcagcacagagctcaaccaaatcaacacatctt
ccggagcacaccaaacatgatattacttcggttccttctgaaaatgttaccagacaacct
tattcaacttccaatacagtatcaagtcgtgttaatcatacagctatgtctaatatgtct
acacaggagccaaagaaatccacagtaacccaaacaataggcgtctctaaaggccaatca
accgtccatcgaactactgttgagacaacatcagcactagctagttcctctatttctttg
accacaaactctattccagagcccacggaagtgatctttgagggaaagataaaatttgct
gtggactggcatccagctctcgagaataagaatagtgaagaatacaagaatgtttcggca
aattttctagcattgatggctgctgtatatgaaaaaggagaactgaaagaagtgtacatg
aaaacggaaataatcagcattactgagggtagcattgacgttaagtataaccagactttc
aagcatccagagatcgacctcgcaaacggcacggtcattgaagtcagtaacgccactgtc
atcgactcctttgagaagggaatcaaggaacttgaagaagagtctcccacaaacagtgat
ttcattcaggatctggttcaaacattcaacatcactcacgcgcgtatggagctaagagaa
ttagtaagaccacccaggaccacaacaactttgtcaagttcaactttaacagcaagaaaa
acaacaacatctttagaagtaacgaagactcctaaaaatgacaagacttggctggatgac
cacttgaccacggttatcggggcgtcagccggggcagtagtactgctgatgatcctaggc
tttatcgtcagaactgtcagacgacgtcatagggagaaggaactgctgtgggatgacgac
atcaatatggaacccactttttctaaattcgacaccgacgaacaagcgcttagtgccacc
aaccccacctatacgtataatggtggaaagctcgaaataaactccccctag
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