Crassostrea virginica (eastern oyster): 111108705
Help
Entry
111108705 CDS
T09197
Name
(RefSeq) neurogenic locus Notch protein-like
KO
K20994
Notch 2
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111108705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
EGF_TEN
hEGF
EGF_Teneurin
EGF_2
EGF_CA
EGF_3
EGF_DL_JAG
Plasmod_Pvs28
DSL
EGF_MSP1_1
GPR128_N
JAG1-like_EGF2
Caps_synth
Motif
Other DBs
NCBI-GeneID:
111108705
NCBI-ProteinID:
XP_022300454
UniProt:
A0A8B8BCF8
LinkDB
All DBs
Position
8:complement(47122698..47129808)
Genome browser
AA seq
1600 aa
AA seq
DB search
MDALVKLSLLCLVVISGSNGKVTFFIHVDEVKNPQNLVKGGSCCQGANSSLSCPDLCKPL
LRICLRDSSNHCTEEISTTLHMEMNDVIYGSVIGNTTNPLLLEVDHWDRDHDYITVEVYD
RQQSVLKSMITTAIHDQFLVIGKDILSQYWSQKHIQANYFVDKNLFSINLTYKAYCSEGY
YGPDCTIHCPGNITKCVFGGNTYCKTGWSGINCDEDINECSIPSFCGLGNCTNSVGSFHC
KCPSSVYGVKCQLDEDECLTKPCNGGICINTAGNYKCLCNHGLTGKNCEFLTSTVCRANT
CHYHGKCRLENGHAVCSCNPGYTGTDCSVHDPCAVSPCKNGATCSKTKHSYHCQCPKGYT
GKNCDVLDFCFYNPCANGGNCSNTGSDYNCSCTAAFLGRNCDNPNHCFGHTCNGHGICNP
TKTGFSCVCNDGFIGKECNELDLCFKQPCSGNGICQRNASDYFCICNRGFYGKNCNLIDY
CHSNPCKFGQCSQNGSGYMCHCNEGFKGIHCDEIDFCHNQTCSNKGTCHNDKFNYVCRCI
EGYYGTICELKNYCTSNPCVHGQCSSNGTAFSCKCNDGFTGTNCQKVDYCFNKNCTSNGQ
CKNNLYNYTCHCNPGFIGHECETRDVCFGQRCSGHGICHRVIESNYQDFTCKCDLGWSGS
ECQSYNHCYNISCSNHGKCFTGNSDFVCVCDSGFSGKLCDTTQFCKASSCAAPHVCKETL
TGYTCECPYGLSGNSCDRLDHCLKHPCGDHGTCADSDGGFTCRCNPGWTGSLCNEIDHCQ
SNSCQNGAICRNNLFNYTCECPPGFYGSLCEKVDFCDSSPCINNGSCFNHQNTFSCNCAS
EWTGKRCERENICFKTKPCGVHAHCFQVESQVFCSCLDGWTGKNCTIKDYCYASPCGSMG
TCTNLPDSYACNCDPQWTGKRCETYACENNTCLHGYCHASVSTLFSCDCDKGWVGKNCDI
VDLCKSMTCENGGQCVMSIYNSTAVCKCLTGWEGDRCQFDIDECKSPSPCNGRGMCMNTD
GGYSCKCNVGLSGNDCDINVNDCMSNPCHNNATCVDGINSFKCLCSAFFYGTLCEQDVNE
CQYFVCGSHGSCVNTFGDYTCNCDSSWTGRHCENHISSCSLGPCKNNATCFDVEDTFFCT
CDKGFTGRHCDLDVNECQTISPCRNSGSCLNSYGSFDCICPTGWTGKLCDVDSDECQIDP
CPRNTTCVNKIGGFECKDCSTFQCQNGGSCKNTNSGPVCHCLNDWTSVDCSQRNFCKDNP
CGLLQTCINTKNAYTCEYHACKSNPCQNNGQCVENGSEYVCKCSLGWTGKFCDKKDFCVG
DVCQNNGTCENGNATFHCNCANNWFGKQCELYDYCYSNLCKNGGYCQNMLDTYFCNCPEG
WEGKDCDSANFCYSSPCQNNGLCINRNTSYTCSCQNNWKGLHCNQYDYCINSPCKNNGTC
RNEQSSFSCSCSSGYLGRTCDVFDQCVSSPCNNNGSCVMNQSVYECKCHAGYLGPQCQID
QNECVLNLCPAKSTCYNQDGGYTCIWERRRKRSSLLHILQSGEIELPRSSDLKKTETSIA
RARSQIERTFCQSNSLLFEPHSLVFKRNGNLYLNFHIVCK
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atggatgccttggtcaaattatcgctactgtgtttagtggtgatttcgggaagcaatggc
aaggtaacatttttcatccacgttgatgaagtgaaaaatccccagaaccttgtgaagggc
ggaagctgttgccagggagcaaacagcagcctgtcctgtccggatctctgtaaaccactt
ctgagaatatgcctcagggattcctcaaatcactgtacagaagaaatctcaacgacgctt
catatggaaatgaatgacgtcatctatggttcggttattggaaatacaacaaatccccta
ttattggaagttgatcattgggacagggaccacgattatataaccgtggaagtttacgac
agacagcaatccgtcttaaaatccatgataacaactgcgattcatgaccaatttctggtg
attggaaaagatattctttcacaatattggagtcaaaagcacatacaggccaactacttt
gtggataagaatttgtttagcattaatctcacctacaaagcatattgttccgaggggtat
tatggaccggactgcaccatccattgcccaggcaacataacgaaatgtgtttttggagga
aacacatactgcaaaacaggctggagtggtatcaactgtgacgaagatattaatgaatgt
tctataccaagcttctgtggtcttggaaattgtacaaattctgtcggtagttttcactgc
aaatgtccctcttctgtttatggggtgaaatgtcaacttgatgaagacgaatgcctaacg
aagccttgcaacggtgggatttgcattaatacggcagggaattataaatgtttatgcaac
catggattaacagggaagaactgcgaattcttaacgtcaactgtttgtagagcaaatact
tgccattatcatggaaagtgccgactggagaatggccatgctgtatgctcatgcaatcct
ggttatactggcacggactgttctgtgcacgacccctgcgcagtaagtccatgtaaaaat
ggggcaacatgttcaaaaactaaacacagttaccattgtcaatgtccgaaaggatatacg
ggcaaaaactgcgatgttttggatttttgtttctataacccatgtgctaatggcggaaat
tgctcaaacacaggttctgactataattgctcctgcactgcagcattcctgggtagaaat
tgtgataatcctaatcactgttttggacatacttgcaacggacacggaatttgcaatcca
actaaaaccgggtttagttgtgtatgcaatgatggttttattggaaaggagtgcaatgaa
ttggacctttgttttaagcagccgtgcagtggtaatgggatttgtcaacgtaatgcgtcc
gattacttttgcatctgcaatagaggattttatggaaaaaattgcaatcttattgattac
tgtcattcgaatccttgcaaatttggccaatgtagtcaaaatggctcaggatatatgtgt
cactgtaatgagggattcaaagggattcactgtgatgaaatagatttttgtcacaatcag
acatgttcaaacaaaggcacgtgtcacaatgataaattcaattacgtttgcagatgcatt
gaaggatactatgggacaatttgtgaattaaagaattactgtacatctaacccttgcgtc
catggccaatgctccagcaatgggaccgcattttcatgcaagtgtaatgatggcttcact
ggcactaactgtcaaaaagttgattattgctttaataaaaattgcacttccaatggtcag
tgtaaaaacaatctttataattacacttgccattgtaatcccggatttattggacatgaa
tgtgaaacaagagacgtttgcttcggacaacgttgcagcggtcacggtatctgccacagg
gttattgaatctaattaccaagacttcacatgcaagtgtgatttgggatggtcaggttct
gaatgtcagtcatataaccattgctataatatatcatgttcgaaccacggaaaatgcttt
acaggaaatagtgactttgtctgtgtttgcgattctgggttttcgggtaaattatgtgat
acgacccaattttgcaaagcttcgtcttgtgctgcacctcatgtctgcaaagaaaccctc
actggttatacttgtgaatgtccatacgggttaagcggaaatagttgtgatcgacttgat
cactgtctcaaacatccatgtggtgaccatggtacatgtgcagatagtgacgggggtttt
acgtgtcggtgtaatcctggttggacgggatcgctttgtaatgaaattgatcattgtcaa
agtaattcgtgccaaaatggagcaatttgtcgtaataatctgtttaactatacctgtgag
tgtccaccaggcttttatgggtcattgtgtgaaaaagtcgatttttgtgatagcagtcca
tgcatcaacaatgggtcatgttttaaccatcagaatacattttcttgcaattgcgcaagt
gaatggacaggaaaacgttgcgaaagagaaaacatatgtttcaaaacaaaaccatgtgga
gttcatgctcattgttttcaggttgaatcgcaagtgttttgttcctgtttagatggttgg
actgggaagaattgcacaattaaggactattgttatgcttcaccttgtgggtccatggga
acctgtactaatctgccggattcctacgcctgtaactgtgatccacaatggactggaaaa
cgttgtgaaacgtatgcctgtgaaaataatacatgccttcacggatattgtcatgcgtct
gtaagcacgcttttttcgtgcgactgtgataaaggttgggtaggtaaaaactgtgatatt
gtagatctatgcaaatcaatgacttgtgaaaatggtggacaatgtgtcatgtctatttac
aattcaactgctgtctgcaaatgcttaacaggatgggaaggagatagatgccagtttgac
attgatgagtgtaagagcccaagtccttgtaatggacgtggtatgtgcatgaacacggat
ggtgggtactcctgcaagtgtaatgtggggctcagtggtaacgattgcgacataaatgtc
aacgattgcatgtccaatccttgccataacaatgcaacttgtgtcgatggaatcaatagt
tttaaatgtttgtgttctgctttcttttacggcactctgtgtgaacaagatgtaaatgaa
tgtcaatattttgtctgtgggtcacacgggtcatgcgttaacacttttggcgattatact
tgcaattgtgattcaagttggactggtcgtcattgtgaaaaccacattagttcgtgttcc
ttaggtccatgtaaaaataatgcaacctgttttgatgtagaggatacattcttctgtacc
tgtgataaaggatttacagggcgacactgcgatttagacgtcaatgaatgccaaaccatt
tcaccgtgtaggaacagcggttcatgcttgaattcatatggatcgtttgattgcatatgt
ccaacgggatggacgggaaaactttgcgatgttgattctgacgaatgccagattgaccct
tgtccacgaaacacaacttgtgtgaataagataggtggctttgaatgcaaagattgctct
acattccaatgtcagaatggcggctcctgcaaaaataccaattctggtcccgtctgtcat
tgtttgaacgattggacaagtgttgattgcagtcaaaggaacttttgcaaagacaatcca
tgtgggttactccagacgtgcatcaatactaaaaacgcgtatacttgtgaataccacgct
tgtaaaagtaatccatgtcaaaataacggtcaatgcgttgaaaatggcagtgaatatgta
tgtaaatgcagtttgggttggactggcaagttttgcgacaaaaaagatttttgtgtcggg
gatgtttgccaaaataatggaacttgtgaaaatggaaatgccacctttcattgcaactgc
gcaaacaactggtttggaaaacaatgtgaattgtatgactactgttattcaaatctttgc
aaaaatggtggttactgtcaaaatatgttagacacatatttttgtaactgtcctgagggt
tgggagggtaaagattgtgattcagcaaatttttgttatagctcaccttgccaaaataac
gggttatgtataaaccggaacacatcgtacacatgttcttgtcaaaataattggaaaggg
ttgcattgcaatcaatacgactattgtatcaactcaccatgcaagaataatggaacctgt
cgaaatgagcaaagttcgttttcatgttcttgttcaagtggatacctagggagaacctgt
gatgtattcgatcagtgcgtttctagtccatgcaataacaatggatcctgtgtgatgaat
caatctgtatacgaatgcaaatgccatgcgggttaccttgggccccagtgtcaaatcgac
caaaatgagtgcgtgctgaacctctgtcccgctaagtcaacttgttataaccaagatggt
ggatatacatgtatctgggaaagaagaaggaaacgaagttctcttttacacatactacaa
tcaggggaaatagagcttccacggtcatcagacctaaagaaaacagagacaagtatcgct
agagctcgaagtcaaattgaaagaacattctgtcaatccaacagtttgctgtttgaacca
cattcgttagtttttaaaaggaacggaaacttgtacctaaatttccatattgtctgcaaa
tag
DBGET
integrated database retrieval system
