Crassostrea virginica (eastern oyster): 111109112
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Entry
111109112 CDS
T09197
Name
(RefSeq) notchless protein homolog 1-like
KO
K14855
ribosome assembly protein 4
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvn03009
]
111109112
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111109112
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
NLE
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_EIPR1
PD40
Beta-prop_DCAF4
RMC1_N
Ge1_WD40
Beta-prop_HPS5
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
111109112
NCBI-ProteinID:
XP_022300908
UniProt:
A0A8B8BCI7
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Position
8:complement(47041556..47047141)
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AA seq
322 aa
AA seq
DB search
MEEADSDDKRILAQFKSENGDVTGNAFDLPLNVTADKLQLICNALLANEDPIPYSFFVND
VEVTDNLVKSLDSKALEDTEQVLDIVYLPQAIFRVRAVTRCTSTIPGHAEAVISVAFSPD
GRYLASGSGDTTVRFWDVTTETPHHTCKGHKHWVLCIAWSPDGRKLASGCKNSQICVWDP
ETGQQKGKTLIGHKQWITWLAWKPFHLDAECRFLASSSKDGTIKIWDTLLSQCHITLSGH
LQSVTCIKWGGSNLIYSSSQDRTIKVWRSEDGVLCRTLQGHGHWVNILALSTDYVMRTGA
FDPVNAKIVPQDIQESGKKLVL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcagattcagatgacaaaagaattttggctcagttcaaaagtgaaaatggt
gatgtcactggaaatgcatttgatttgcctttaaatgtaacagcagataaactacagttg
atttgcaatgccttgttggccaatgaggacccaattccttattcattctttgtgaatgat
gtggaagtgactgataatttggtgaagtcactagacagtaaggcgttggaggacacagag
caggtgctggacattgtgtacctaccccaggccatcttcagggtccgggcggtgaccagg
tgcaccagcaccatcccaggccacgcagaggctgtcatctcagtggcctttagtccagac
gggcgttatttggcaagtggatcaggagatacaacagttcgattttgggatgttaccaca
gaaaccccacaccatacatgtaaaggtcacaaacactgggttttatgcatagcttggtct
ccagatggaaggaaattagcatcaggatgtaaaaatagtcagatttgtgtatgggatcca
gaaacaggccaacaaaaagggaagaccctgataggacacaaacagtggattacttggctg
gcttggaaacccttccacttagatgcagaatgcagatttttagcaagcagttctaaagat
ggcacgatcaagatttgggatacactgctgagccagtgtcacataactttgtctggacac
ttacagtctgtaacgtgtatcaaatggggtggatccaacctcatttactcctcctcccaa
gacagaacgatcaaagtgtggagatcagaggatggagttttgtgtaggacactgcaaggt
catgggcattgggtgaatatcctagcactgagcactgactatgtgatgagaactggggcc
tttgacccagttaatgctaaaattgtaccacaggacattcaggaatcaggtaagaaattg
gtgctttaa
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