KEGG   Crassostrea virginica (eastern oyster): 111109112
Entry
111109112         CDS       T09197                                 
Name
(RefSeq) notchless protein homolog 1-like
  KO
K14855  ribosome assembly protein 4
Organism
cvn  Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cvn03009]
    111109112
Ribosome biogenesis [BR:cvn03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    111109112
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 NLE Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Beta-prop_EIPR1 PD40 Beta-prop_DCAF4 RMC1_N Ge1_WD40 Beta-prop_HPS5 WD40_RFWD3
Other DBs
NCBI-GeneID: 111109112
NCBI-ProteinID: XP_022300908
UniProt: A0A8B8BCI7
LinkDB
Position
8:complement(47041556..47047141)
AA seq 322 aa
MEEADSDDKRILAQFKSENGDVTGNAFDLPLNVTADKLQLICNALLANEDPIPYSFFVND
VEVTDNLVKSLDSKALEDTEQVLDIVYLPQAIFRVRAVTRCTSTIPGHAEAVISVAFSPD
GRYLASGSGDTTVRFWDVTTETPHHTCKGHKHWVLCIAWSPDGRKLASGCKNSQICVWDP
ETGQQKGKTLIGHKQWITWLAWKPFHLDAECRFLASSSKDGTIKIWDTLLSQCHITLSGH
LQSVTCIKWGGSNLIYSSSQDRTIKVWRSEDGVLCRTLQGHGHWVNILALSTDYVMRTGA
FDPVNAKIVPQDIQESGKKLVL
NT seq 969 nt   +upstreamnt  +downstreamnt
atggaagaagcagattcagatgacaaaagaattttggctcagttcaaaagtgaaaatggt
gatgtcactggaaatgcatttgatttgcctttaaatgtaacagcagataaactacagttg
atttgcaatgccttgttggccaatgaggacccaattccttattcattctttgtgaatgat
gtggaagtgactgataatttggtgaagtcactagacagtaaggcgttggaggacacagag
caggtgctggacattgtgtacctaccccaggccatcttcagggtccgggcggtgaccagg
tgcaccagcaccatcccaggccacgcagaggctgtcatctcagtggcctttagtccagac
gggcgttatttggcaagtggatcaggagatacaacagttcgattttgggatgttaccaca
gaaaccccacaccatacatgtaaaggtcacaaacactgggttttatgcatagcttggtct
ccagatggaaggaaattagcatcaggatgtaaaaatagtcagatttgtgtatgggatcca
gaaacaggccaacaaaaagggaagaccctgataggacacaaacagtggattacttggctg
gcttggaaacccttccacttagatgcagaatgcagatttttagcaagcagttctaaagat
ggcacgatcaagatttgggatacactgctgagccagtgtcacataactttgtctggacac
ttacagtctgtaacgtgtatcaaatggggtggatccaacctcatttactcctcctcccaa
gacagaacgatcaaagtgtggagatcagaggatggagttttgtgtaggacactgcaaggt
catgggcattgggtgaatatcctagcactgagcactgactatgtgatgagaactggggcc
tttgacccagttaatgctaaaattgtaccacaggacattcaggaatcaggtaagaaattg
gtgctttaa

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