Crassostrea virginica (eastern oyster): 111109135
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Entry
111109135 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: germinal-center associated nuclear protein-like
KO
K24317
germinal-center associated nuclear protein [EC:
2.3.1.48
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111109135
03036 Chromosome and associated proteins [BR:
cvn03036
]
111109135
Enzymes [BR:
cvn01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
111109135
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
111109135
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
111109135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
MCM3AP_GANP
CSN8_PSD8_EIF3K
TPR_Vps8
AAA_17
Motif
Other DBs
NCBI-GeneID:
111109135
NCBI-ProteinID:
XP_022300929
UniProt:
A0A8B8BDS4
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All DBs
Position
8:complement(49106704..49130247)
Genome browser
AA seq
1314 aa
AA seq
DB search
MERRLVMCSSYSFRGGSKMERRAFYGAIFSLKSSTARNNSDKLQILNLRDKVNRIGSKKQ
SDLATAKAFVGTCTDMCPEKERYDREEKRRLHNYEVLQGTEGTGNPQVNHSLAVKEYSRS
SADQEEPLPYELRTLPTLTLTMTYLLSQIADRGEDGKWGDWFDFLWNRTRGIRKEITQQQ
FCSTESTALLEKCVRFHIFCAERLCEEDMHFFDDKINNENMTKCLQTLKENYCDLEKKQV
FCPNEAEMRCYMVLMNLNQGDILRETQQLRPEVRNTTFINYALQVYAALNSNNYVRFFRL
VRQGSFLCACITHRYFTQVRKKALQILLKAYRKGIQLPLDELVRTLGFDDQNEAAQFCQF
FGLTTDESCVTLDKAMFIEPEENWCPRRSTLIEQKRTTSIGEAINGEPLPALSLPQPENS
FDASGKFVGQILVKDSDFADSSRKEATSAPLVADHAPLPTPVLPTPQPVSPRKAKVTFSP
EEVKEEARSLFWDVIDSMCLDIGQEVKREVVEPLMDASVSVYESITTEVVAEFVSTLADS
VTTLQKQQKAEREAQAQNRVSALVTSDILREVLDEETLRSAQDEYREVQAELKRQRIERC
SAEVTEAILNSSVLDMTLSLSEEFYQKDVVERLEQLEDYEQCVKINRTGRFFRIWKAQHA
ARVKFKRSMLDFPSSSAMLDPTEQIETLLPDTRAEDIEDDGFYVNQTTKLSVESPLEFLK
RLEAEEKALTAHEIYRNLCQQKAWRPLDLGSLVGGQLMKQNKAISKKDPHLSALFWKLVI
SLPDPDYIQSETQGRSLRQLTKWLKAKFHRGSSHSTNLSSLQNELLSLYSVPVSINSLCG
SLGVCVRLLEGNITIGDVAGTLLGTSALLFVLPPPVSEDPEWLIWEEENRRLEELLRRKP
CSPALPLVVVCPVPANERVEEHFVRRCLNIDDLILGGLISDMSLCVLPYGDEDLPEGIDV
ANPEISEKLSDGVRWLSQHSMGDLGLRSRHLQPLVEDLLQEHFYSRVLYNLKQRKLNGYL
HQDPNTIISLYNAVVSHLTQVLTSPKLFDYSWPASEFTHSKKHDLPPLYWNSDTHLEALH
GLLYDLRLPRFVYSKEERYDWSAVCAGVWAYVQKIVQNFEPSQCLDLTSKIRVLLHRAQK
DFEDVSDLRTGVSQCQPAYINMPWTDLIMACVDFKISGVDFTDPDSETAMEEMVVGYNKA
DLADFEFPQEWRHFENDKDREGTISLEETFQKAAASQCSRRRNQRETEDKSSKVKPKVKS
VILDPLPKSVHDATRPYQKKLQKSYCFSYQNSYQKVITKLSKIGTNNARMCFKL
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaggcttgtgatgtgttcgagctacagcttcagaggtggatccaaaatggag
agaagggcattctatggtgctatttttagcttgaagagctccactgctcggaataactct
gataagttgcagatcctcaatttacgggacaaggttaatcgcattggatctaaaaagcag
tcagatttggcaacagccaaagcgtttgttggaacctgcactgacatgtgtccagagaag
gaacgttatgacagagaggagaaacgaaggcttcataactatgaggttctacaaggcaca
gaggggactggtaatccacaggttaaccactctttggcagtaaaggaatacagcaggtca
tcagctgatcaggaggagcccctgccatacgagttgagaactctgcccaccctcaccctg
accatgacctacttactgagccagatagcggaccggggagaggacggcaagtggggtgac
tggttcgacttcctgtggaacaggacaagaggcattcgtaaggagatcactcagcagcag
ttctgtagcacagagagcacggccctgttggagaagtgcgtgcgcttccacatcttttgt
gcggagcgtctttgtgaggaggacatgcacttcttcgacgacaaaatcaacaacgagaac
atgaccaaatgtctgcagaccctcaaagagaactactgtgacctggagaagaagcaggtg
ttctgtcctaacgaggccgagatgaggtgttacatggtgctgatgaatctcaaccagggc
gacatcctcagggagacgcaacagctgaggccagaggtgcgcaacacaaccttcatcaac
tatgccctgcaggtctatgccgccctcaacagcaacaactacgtgcgcttcttccgattg
gtccgccagggctcttttctgtgtgcctgtataacacatagatatttcacccaagtccgg
aagaaagccttgcagatcctgttaaaggcatacagaaaagggattcagctcccattggac
gagctggtgagaacgcttggctttgacgatcagaatgaggcggcccagttctgtcagttc
tttggactgaccacagatgagagctgtgtcacgctggacaaggcaatgttcattgagcca
gaggaaaactggtgcccgcgtcgatcgactcttatcgagcaaaaacgcaccacgtccatc
ggcgaggctatcaatggagaaccactgcctgctttgtccctaccacagcctgaaaacagt
tttgatgccagtgggaaatttgtaggccagattttagtaaaggattcagactttgctgat
tcttcaagaaaagaagccaccagtgctccacttgtcgctgaccacgccccacttcccaca
ccagtcctccccaccccccaacctgtgtctccccgcaaggccaaggtcacgttctccccc
gaggaagtgaaggaggaggcgcggtccctgttctgggacgtgatagacagcatgtgtctg
gacatcgggcaggaagtgaagcgtgaggtggtggagccattaatggacgcctcggtgtct
gtctacgagtccatcaccacagaagttgtggctgagtttgtatcgacactagctgattca
gtgaccacactacagaagcaacagaaagccgagagggaggcccaagctcagaatcgggtg
tccgcccttgtaaccagtgacatcctgagggaagtactggatgaagaaaccctgcgctct
gcccaggacgagtacagggaggttcaagcagagctgaagagacagagaattgagaggtgt
tccgcagaagttacagaggccattctgaactcctcggttttagacatgactttgtcttta
tcagaagaattttatcaaaaggatgtggttgaaaggctagaacagttagaggactatgaa
caatgtgtaaaaatcaacaggacaggtcgattcttccgaatttggaaagcgcagcacgca
gctcgagtcaagttcaaacgctccatgttggattttccatcatccagtgccatgttggat
ccaacagaacaaatcgagacacttcttcccgacacgagggcagaagacatagaggacgac
ggattctacgtcaaccagaccacgaagctgtccgtggagtcgccgttggaattcttgaaa
agactggaggccgaggaaaaggccttaaccgcacacgagatctacagaaatctgtgtcaa
caaaaagcttggaggcctctagatcttggttcactggtgggaggccaactaatgaagcaa
aacaaggctatcagcaaaaaagacccacatctcagcgctttgttctggaagctggtgatc
tcattacccgacccagactacatacagtctgagacccaaggcaggagtctaaggcagctc
acaaaatggttgaaggccaagttccacagagggtcgtcccactcgaccaacctctcctct
ctgcagaatgagctgctgagcttgtacagtgttcctgtgtcaataaactccctgtgtggc
tccttgggtgtttgtgtgaggctcctcgagggtaatataaccataggagatgtagcaggt
accctgctgggaacctcggctctcctctttgtcctacccccaccagtcagtgaggaccca
gagtggcttatatgggaggaagagaatagacgacttgaggagctcttgaggaggaaaccc
tgctctcctgcgctgccattggttgttgtgtgccctgtaccagccaatgaaagagtggag
gagcattttgtgcggaggtgtttgaacattgatgacttgatattgggggggctgatcagt
gacatgtcgctgtgtgtgctaccttatggggatgaggatctaccggagggcatagatgtg
gctaatcctgagatttcagaaaaattatcggacggtgtgaggtggttgtcccagcattcc
atgggggacctcggactgaggtcccggcacctccagcccctggtagaggacctcctgcag
gaacacttctacagccgcgtgttgtacaacctcaaacagcgcaagcttaacggatacctc
caccaggaccctaacaccataatatcactgtacaacgccgtggtcagccatttgacgcaa
gtgcttacatcaccgaagctctttgattactcttggcctgccagcgagtttacccactca
aaaaaacacgatttgcctcccctgtattggaattcagacacacacctggaggcgctgcat
ggacttctctatgaccttcgactcccacggtttgtgtacagcaaagaggagcgatatgat
tggtccgcagtgtgtgcaggtgtctgggcctacgtacagaagattgtccaaaattttgaa
ccctcccagtgcctggatttaacatcaaaaatacgagttctgcttcatcgagcacagaag
gactttgaggacgtgagcgacctccgtacaggggtcagccagtgccaacccgcctacatc
aacatgccctggacggacctcatcatggcttgtgtggattttaaaatttctggggttgac
tttacagaccctgattcagagacagcaatggaggagatggttgttggatacaacaaggcg
gatctcgccgacttcgaatttccgcaagagtggcgccattttgaaaatgacaaggatcga
gaaggaactatatccttagaggagacctttcagaaagctgcagcaagccagtgttcgcgg
aggagaaatcaaagagaaactgaagataagagttcaaaggttaaacctaaagtgaagtca
gtaatactggaccctttgccgaaatcagtgcatgatgcaacccgcccataccaaaaaaag
ttacaaaaaagttattgttttagttatcaaaatagttatcaaaaagttataactaagtta
tcaaagattggaacaaataatgcaaggatgtgtttcaaactttga
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