Crassostrea virginica (eastern oyster): 111109351
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Entry
111109351 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvn04054
]
111109351
Pattern recognition receptors [BR:
cvn04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111109351
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_14
LRR_9
ThsB_TIR
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
111109351
NCBI-ProteinID:
XP_022301138
UniProt:
A0A8B8BD61
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Position
8:70712108..70714380
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AA seq
757 aa
AA seq
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MTMPSYVAYLLVLQLVSVLGMNVNNCTYDADCVCSLVNGTLYADCSNRELLRFPTFWPHV
SRINISNNSLTQFPDRSLIPDDLTYLDFSFNKINKFRNNTFKQLWKLSDLRLNHNRLHFT
NDIERGIFADLINIKHLDISNNPLLTFRILPILIYGLQNSTIEILRLNKLHCPFGLNTEL
RIEDVRYLRHTNLRELHIASNKIAIIETGAVYFFPSTLQKISLADNALSFGLYIFEMYSL
KNLETLIVSQQHRQPSTHEISDNLIFLACNNGRRYFPDSRSLHESSIKPLMYHKGLQNRL
FEKRSSTLVNVTVPIPKSLKTVYMNDGLFGYAIPEMSFTENSIENLYFQGNLMESWIGPV
RGMENLKRLNLSNNFCSKISTXFFQHFTGMSSLYLNNNLLGFSLASDTDGSIFKALKRLN
YLELKNNKITQLPFAVFKNLKSLQKLYLNDNLLTDIRFDIVTLESLQYLDLSENQIQYLS
ESTMQQLDQHAHFTLNLKGNPLLCSCGTLSFLQWMIETQSRNVDMDNFRDYTCTQFSRKG
KILNFTNVEDHIEELTKKCSSYNTLICVIISSIILFLVVLSAGLFYRFRWKLRYFYYMTK
SRYHGYKAVRGDDQSDFKYDAFVSYADEDMEFVGEMISKLEGERNMRLCIHHRDFVPGYD
IAENIITAINKSKKTIVILSENFIKSSWCMYELHIAKMEEIYSRDTGDVLCLLCYKSIPT
ETIPLSVMDVINQKSYMEFPNDADDNTVFWNRLWETV
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccatcctacgttgcctaccttctagtattgcagcttgtctcggtgttggga
atgaatgttaataattgtacatatgatgctgactgtgtttgctctttggtcaatgggaca
ctgtatgcagattgttctaatcgagagctgcttcgttttccaacattctggcctcatgta
tctagaatcaacattagcaataacagtctcacacaatttccagatagatctctcatcccg
gatgacttgacatatttggatttttcgttcaacaagataaacaagttcagaaacaacaca
ttcaaacaactctggaaattatctgatcttaggctcaatcacaatagactccattttact
aatgacatagaacgtggcatttttgcagacctgattaatatcaagcatttggacatttcc
aacaatcctctactcacttttcggatattgccaatattaatatacggccttcagaattct
acaattgaaatccttcggttaaacaaacttcattgtccatttgggctgaacacagaactc
cgaattgaagatgtaaggtatcttaggcatacgaatcttcgagaacttcatatagcaagc
aataaaattgcaataatagagactggggcagtctattttttcccatcaacattacagaaa
atttccttggcagataatgccctctcctttggtctctatatatttgagatgtattcacta
aaaaatctggaaacattaattgtctcccagcaacatagacaacccagcacgcatgaaatc
tctgataatctaatttttcttgcgtgcaataatggaagaagatactttcccgactccaga
tcacttcatgagtcttcaatcaagcctttaatgtatcacaaaggactacaaaatcgcctg
tttgagaaacgttcatccacgcttgtgaacgtaaccgttccaattccaaaaagtctgaag
acagtttacatgaacgatggtttattcgggtacgctattccagaaatgagttttacggaa
aacagcatagaaaatttgtactttcaaggtaatctcatggaatcgtggattggtccagtt
cgaggaatggagaatctcaaaaggctaaacttgtcaaataacttttgctcaaaaatctct
acanatttttttcagcattttaccggaatgtcttctttatatttaaataataatttactt
ggattcagtcttgcttcagatacagatggaagcattttcaaagctttaaaacgattaaat
tatttagaactaaaaaacaacaaaataacacaacttccctttgcggttttcaaaaatctc
aaaagtttacaaaaactgtatttgaatgataatttgttaaccgacatcagatttgatatt
gttaccttagaatctcttcaatatctagacttgtccgaaaatcaaattcaatacctttcg
gagtcaacaatgcaacaattggaccagcacgctcattttactttgaacttaaaaggaaat
ccccttttgtgcagttgtggaactttgtcatttctacaatggatgatagaaacacagtca
aggaatgtagatatggacaatttcagagattatacctgtactcaattttctcgaaaagga
aaaatcctgaattttactaacgttgaagatcatattgaggaattgacgaagaaatgcagc
tcctacaacactcttatctgtgttattatttcgtcaatcatactcttcttggttgtgctc
tctgctggattattctataggtttagatggaaacttcgttacttttactacatgacaaaa
agtcgttatcatggatataaagctgttcgaggggatgaccagtcagacttcaaatatgat
gctttcgtttcttatgcggacgaggatatggagtttgttggagaaatgatatccaagcta
gaaggagagagaaacatgcgtttgtgtatccatcatcgtgattttgttcctggatatgac
attgctgagaacatcattaccgccattaacaaaagcaagaaaacgattgtcattctgtct
gaaaacttcatcaagtcaagttggtgcatgtatgaacttcatattgcaaaaatggaagaa
atatactctagagacaccggagatgttttgtgtctactttgttacaaatcgattcctacc
gaaacgattccattaagtgtaatggacgtgattaaccagaagtcttacatggagtttcca
aatgatgccgatgacaacacagtgttttggaatcgactttgggaaacggtttag
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