Crassostrea virginica (eastern oyster): 111109366
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Entry
111109366 CDS
T09197
Name
(RefSeq) TATA-box-binding protein 2-like
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111109366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111109366
03021 Transcription machinery [BR:
cvn03021
]
111109366
Transcription factors [BR:
cvn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
111109366
Transcription machinery [BR:
cvn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111109366
RNA polymerase III system
TFIIIB
111109366
RNA polymerase I system
SL1/TIF-1B
111109366
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
111109366
NCBI-ProteinID:
XP_022301153
UniProt:
A0A8B8BD75
LinkDB
All DBs
Position
8
Genome browser
AA seq
169 aa
AA seq
DB search
MQLTNVVVQARLNCDLDLRALANAMVNVRYDPTRFSGLIWQHRNIGGNCLLFANGKINCN
GKSDAIQQGVRRLRRYSRLLQRKGCHVTLSNVRVLTVSASHRLDGRVTLERIPYDFRYEP
ELFPAVMFTRKGIHFTLHLSGALLITGIKKSRDLENVVYPTVLELNVCL
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgacgaacgtggtcgtgcaggctcgtctcaactgtgacctggatctgagagcg
ttggccaacgcaatggtgaatgttcgttacgacccgacccggttttcgggtttaatctgg
cagcatcggaacataggagggaactgtttgctgtttgccaacggcaagattaactgtaac
gggaaaagcgatgctatacaacagggcgtgcggcgacttagacgctacagccgtttactt
caacgaaaaggatgccacgtgacactcagcaacgtccgagtgctgacggtctctgccagt
catcgtctggatggacgcgtgacactggagcgcattccctacgactttcgctacgaaccc
gaactttttcccgccgtcatgtttacgcgcaagggcatccattttactttacacctctcg
ggcgccttactgatcacgggtatcaaaaaatcgcgggacctcgagaacgtggtctatccc
acggtgctagaattgaacgtgtgtttatga
DBGET
integrated database retrieval system