KEGG   Crassostrea virginica (eastern oyster): 111109366
Entry
111109366         CDS       T09197                                 
Name
(RefSeq) TATA-box-binding protein 2-like
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    111109366
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cvn03000]
    111109366
   03021 Transcription machinery [BR:cvn03021]
    111109366
Transcription factors [BR:cvn03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    111109366
Transcription machinery [BR:cvn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     111109366
  RNA polymerase III system
    TFIIIB
     111109366
  RNA polymerase I system
    SL1/TIF-1B
     111109366
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 111109366
NCBI-ProteinID: XP_022301153
UniProt: A0A8B8BD75
LinkDB
Position
8
AA seq 169 aa
MQLTNVVVQARLNCDLDLRALANAMVNVRYDPTRFSGLIWQHRNIGGNCLLFANGKINCN
GKSDAIQQGVRRLRRYSRLLQRKGCHVTLSNVRVLTVSASHRLDGRVTLERIPYDFRYEP
ELFPAVMFTRKGIHFTLHLSGALLITGIKKSRDLENVVYPTVLELNVCL
NT seq 510 nt   +upstreamnt  +downstreamnt
atgcagttgacgaacgtggtcgtgcaggctcgtctcaactgtgacctggatctgagagcg
ttggccaacgcaatggtgaatgttcgttacgacccgacccggttttcgggtttaatctgg
cagcatcggaacataggagggaactgtttgctgtttgccaacggcaagattaactgtaac
gggaaaagcgatgctatacaacagggcgtgcggcgacttagacgctacagccgtttactt
caacgaaaaggatgccacgtgacactcagcaacgtccgagtgctgacggtctctgccagt
catcgtctggatggacgcgtgacactggagcgcattccctacgactttcgctacgaaccc
gaactttttcccgccgtcatgtttacgcgcaagggcatccattttactttacacctctcg
ggcgccttactgatcacgggtatcaaaaaatcgcgggacctcgagaacgtggtctatccc
acggtgctagaattgaacgtgtgtttatga

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