Crassostrea virginica (eastern oyster): 111109481
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Entry
111109481 CDS
T09197
Name
(RefSeq) F-box/LRR-repeat protein 14-like
KO
K10280
F-box and leucine-rich repeat protein 14
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111109481
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111109481
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
LRR_RPS2
LRR_At1g61320_AtMIF1
F-box
LRR_EndoS
LRR_Zer-1
LRR_8
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
111109481
NCBI-ProteinID:
XP_022301322
UniProt:
A0A8B8BD40
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Position
8:55956861..55958712
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AA seq
403 aa
AA seq
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MERKGGKPNQHISCLFPEVLTIIFCYLSVKDKGRVAQVCVKWRDVAYNRCVWRGVCAKLH
LRRANPSLFPSLVKRGIKRVQILSLKRSLRDVVVGIPNVETLNLSGCFVVTDHALGHAFS
QDLPCMTVLNLSLCKQITDNSLGRIAQFLTNLEVLELGGCSNITNNGLLLIAWGLRKLKT
LNLRSCRHISDVGIGHLAGNSPDAAAGTLELENLGLQDCQKLTDLSLKHISSGLVNLKTL
NLSFCGSVTDSGVKFLSKMQTMREINLRSCDNISDISLGYLAEGGSRITSLDVSFCDKVG
DEGLVHLAQGLFSLRNISLSACNISDEGLNRLVNTLQDITTLNIGQCVRITDKGLTLIAD
HLKNLQSIDLYGCTRITTVGLERIMQLRGLTTLNLGLWHKGEI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaagggcggaaagcccaatcaacacatttcatgtttatttcctgaagtgtta
acaattattttttgctacttaagtgtcaaagataaaggccgtgtcgcgcaagtgtgtgta
aaatggcgagatgtcgcttacaatcggtgtgtgtggcgaggtgtgtgtgcgaagctccat
ctccgccgggccaatccgtctttgttcccaagtttagtgaaacgtggaataaaaagggtg
cagattcttagcctcaaacggagcttgcgtgacgtggtggtggggattcccaacgtggag
accctgaacctcagcggctgtttcgttgtgacagaccatgctctcgggcatgcattctca
caggatctcccatgcatgacggtgctgaacctcagtctgtgtaagcaaatcacagacaac
agtttgggacgaatcgcccaatttttaacgaacctagaagttcttgaacttggtggttgt
agtaatataacgaacaatgggctgttactcatagcttggggtttgcgtaaactgaaaact
ttaaatcttcgaagttgtcgccacatatctgacgttggaattggacatttagcagggaat
agtcccgatgctgctgctgggacactagaacttgaaaacttaggattacaagattgtcag
aaactaacagacctctcattaaaacacattagtagtggtcttgtcaatttaaaaactttg
aatttaagtttttgtggcagcgtgactgatagtggtgttaaatttttatccaagatgcaa
acgatgcgggaaataaacctgaggagctgtgataatattagtgacatcagcctcggatat
ttagcggaaggtggatcgcgtattacttcactggacgtcagtttctgtgacaaagtcgga
gacgaaggcctagttcatttagctcaaggattattcagcctgcgaaatattagtttgtca
gcttgtaacataagtgacgagggtctgaatcgccttgtgaataccttgcaagatattacg
actttaaacataggccaatgtgtgagaattaccgacaaaggtctaacattgatagccgac
cacctgaagaatcttcagtccattgatctgtatgggtgtacccgaataacgaccgtgggt
ctggagaggataatgcaacttaggggtctgaccactcttaacttgggtctttggcataaa
ggtgaaatatag
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