Crassostrea virginica (eastern oyster): 111109595
Help
Entry
111109595 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-like
Organism
cvn
Crassostrea virginica (eastern oyster)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Lectin_C
V-set_CD47
Pur_ac_phosph_N
UL45
C2-set_2
Herpes_gE_N
Motif
Other DBs
NCBI-GeneID:
111109595
NCBI-ProteinID:
XP_022301496
EnsemblRapid:
LOC111109595
UniProt:
A0A8B8BEN2
LinkDB
All DBs
Position
1:12577278..12592295
Genome browser
AA seq
1243 aa
AA seq
DB search
MKGLFLILTTLAICLGLCNSQLIPTANCPLNWYTFEDNCYKFSVYPPRTYNEAAKECEAQ
GAGLLSINSDQEHQFIDQTLQRIDRDKSLWYTSGYKDQNHVKWSGDGSVSGDDVRFWASP
EDFRSLSKFIVYKYSASLQKFAWGAVTGGEPHRFICEIPRTETQRLLQENRDFTYGSNLT
DPSLAPRGPRYTMHPVNLVLTNRSHLPSIECEATGNPQPKYAWHRTDVTGTEEVIGMSEY
YTISNGKLTFNRIDERRDAGTYHCEASNAFGSVRSAPAKITFGSLAQFPNVAPGVNRVAL
YQGTYLNCKAPTHKPAVSYQWMKGTSFLIQALNSYFFLSADGNLYFSEVQQNDEGNYHCI
VTLTAFPGDTLATDQPPSETSLEIKLDVLGDTAALYPPQIHDDFPAVFPKSPRLGQTITI
ECLAYGRIPLQYRWTKSGVGEMPHKVYTRNFDRVLVIPNVQFTDEGTYTCHVTGRTQTES
KDFLLTIGAKPYFVYPLKDLIVDENSDISWRCEGIASPRATYQWYKNAKLLTADTAGIEL
TSNVLKIRNLQKNIHDGMYSCEASNMYGSVVTSAQLKVLSFKPSFAKNPLSTTILAANNG
NLTIPCIPEAAPVPSITWLKNGGKLALSITDGNQRGAQQLTNGYLKIVGISMADSGLYTC
VAANKNGESMSTGNVTVVGGVTIVSQLLPVMRANKNDTVFIECQVSYDVFRVDLVLVWKF
NGRIIDFTKDLLYEKSTRMGIHGLFIHFVDFYHSGVYECVAMSTITQSSISTNLMVLGPP
GMPGNVYRVKGSETTNSVTIKWTKAPDHGSKVQQYYIEARTMNNPTWRPVATNLTEFDVL
IPGNVDTDKRQFTIHGLVPFNSYQFRVYARNVFPEPGEYSRPSEYIQLKPDRPVIPVQNV
GGGGGSVGVLTISWQVLDEEKRCGPGVGYYIYWRKNGTKDMFDQKRLLETDYLFTKMLSG
NSVSYTINLNSDKLFYMPYEVKIGVFNVHGAGPNSSSTVVYSSEGIPLLRPTNVNGWEIN
STALWVTWDPMPNNRDAIKGVIQGYEINVEDANDPNRKSVTAYHYGYMSANNVIGLEPNT
DYWVTVQVFNTAGESNPSEKQLLGTCLNPPLLYPEFVNIRSHGPDSVYVEWRGVSTGLFE
ETLRGYKIRWWLLGENIKSANDTVVDKQTFGVVYGIAKGYVYALRVLGYSXGGDGKMSPT
QYFTLGGRVPVDSRISEVRLSATSTSSSVLFISFLCIMQFILK
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggccttttcctgattttgacgactctggcgatttgtttgggactttgtaattca
cagctgattccgactgccaactgtccattgaactggtacacctttgaggacaactgctac
aaattcagtgtgtaccccccgcggacctacaacgaagctgccaaagaatgcgaggcgcaa
ggagctggactgctgagcatcaattctgatcaggaacaccagtttatcgaccagacactg
cagcgaatcgacagagacaaatctttgtggtatacaagtggatataaagatcaaaaccac
gtcaaatggagtggagacggttcagtttccggtgatgacgtcaggttttgggcgagtcct
gaggattttcgaagtctctcaaagttcattgtatacaaatactctgcctcgctacagaag
ttcgcctggggggcagtcacggggggagagccccatagatttatctgtgaaattccaaga
acagaaactcagcgacttctccaggaaaaccgggattttacatacggttcaaacctgacg
gacccttcattggccccaagaggaccgcggtacacaatgcatcctgtaaacttggtcctc
accaacagatctcacttgcctagcattgaatgcgaggccactggaaatccccaaccgaaa
tatgcttggcacagaactgacgtcactggaactgaagaagtcatcggaatgtcggagtat
tacaccatcagtaacggcaagctgacgtttaaccgaatcgacgagcggcgcgacgcaggc
acctaccactgcgaggcctccaacgcctttggttcagtgcgaagtgctcctgcaaaaata
acttttggaagcttggcccagtttcccaatgtggctccgggcgttaatcgagtggcgctt
taccaaggcacctatctgaactgtaaggcaccgacccacaaaccagccgtctcctatcaa
tggatgaagggaaccagttttctgatccaggccctgaacagttacttcttcctgtcggcg
gacgggaacctgtatttctccgaggttcagcagaacgatgaagggaattaccactgtatc
gtgacactcacagcgttccctggagacaccctagcaaccgatcaaccaccctctgaaact
agcctggaaatcaaattggacgttctgggagacaccgccgcattatatcccccacagatt
catgacgatttccccgctgtttttcctaaatcgccaaggctgggtcagaccattaccata
gagtgtctagcctacggaagaatccccctgcaatatcgctggacgaagtcgggtgttgga
gaaatgcctcacaaagtatatacacgaaactttgaccgagtgttggtgattccgaacgta
cagttcacggatgagggaacttatacctgtcacgtgactgggagaacccaaaccgaatct
aaagatttcttgctaactattggtgcaaaaccttattttgtttaccccctgaaagacctc
attgttgatgaaaacagcgatatttcatggcgttgtgagggaatagccagtccacgggca
acctaccagtggtataagaacgccaaacttctgactgctgacactgcgggaatagaatta
acatcaaacgtattgaagatacgaaacctacagaaaaacatccacgacggcatgtacagt
tgtgaagccagcaacatgtatggctcagttgtgaccagcgcacaactcaaagtcttgtct
ttcaagccgtcttttgctaaaaatcccctgtctaccacgattttggcggcaaacaatggg
aatcttactattccctgtataccggaagcagcgcctgttccaagtatcacgtggttaaaa
aatggcgggaaattggctctttcaataacagatggcaatcagagaggtgcccaacaattg
actaatggataccttaaaatcgttggcataagtatggccgactcaggtctctacacctgc
gtggctgccaataaaaacggcgagagtatgagcactggaaatgtaacggtggtcggcggc
gtaacaatcgtttcacaactgcttccggtgatgagggccaacaaaaacgacacagtattt
attgaatgccaggtatcgtacgatgtgttccgagtagaccttgtcttagtctggaagttc
aacggaagaataattgactttactaaggatttactgtatgaaaagagtacacggatggga
attcacgggcttttcatccacttcgtagacttttatcacagcggagtttacgaatgtgtt
gccatgtcaacgattactcaatcctctatatctacaaatcttatggtactaggtccccct
ggaatgccgggaaatgtgtatcgcgttaaaggatcagaaaccaccaattcagtgactata
aaatggacgaaagcacctgaccatggctccaaagtacaacaatattacatcgaagcacga
acaatgaataacccaacatggcgaccagtggcaacgaatctaacagagttcgatgttttg
attcccggaaacgtggatacagacaaacggcaattcacaattcatggattggttcctttt
aacagctaccagtttagagtgtatgctcgaaatgtatttcctgagccaggagaatatagc
aggccgtccgagtatatacagttaaagccagacagacccgtaattcccgtccaaaacgtg
gggggtggaggtggaagtgtgggtgtgctgaccatctcctggcaggtgttagatgaagaa
aagcggtgtggacctggtgtgggttattacatatattggcggaaaaatggaaccaaagac
atgtttgatcagaaacgacttttagaaaccgattacctcttcaccaaaatgctttccgga
aacagcgtctcctacacgatcaacctaaacagcgacaagttgttttatatgccgtatgaa
gtcaagatcggggtgttcaatgtgcacggggccggtccgaacagctcctccaccgtcgtc
tactcctcggagggaattccgctacttcgcccaacaaacgttaatggttgggagatcaac
tccacagccttatgggtaacgtgggacccaatgccgaacaatcgggacgccataaaaggg
gtcatccaaggctacgagattaatgttgaggacgccaatgatccgaaccggaagtccgtc
accgcctaccattacggctacatgtccgctaacaacgtcatcggtctggagcccaacacg
gactactgggtcacggtgcaggtgtttaacacggccggggagagcaaccccagcgagaaa
cagctgctgggcacctgtctcaaccctcctttactgtatcccgagtttgtgaacattcgt
tctcatggaccagacagtgtgtatgttgaatggaggggtgtttctaccggactgtttgag
gagactctaagaggatacaagatccgatggtggctattaggtgaaaatatcaaatctgcc
aacgatacagttgttgacaagcaaactttcggggtggtatatggaatagccaaaggttac
gtatacgccctccgcgtactgggctacagtnaaggaggagatggtaaaatgagtcccacg
cagtacttcacattaggcggccgagttccagtagactcgaggatttccgaagttcggctc
tccgcgacttccacgagttcttcagtacttttcattagttttctttgtataatgcagttt
attcttaaataa
DBGET
integrated database retrieval system
