Crassostrea virginica (eastern oyster): 111109804
Help
Entry
111109804 CDS
T09197
Name
(RefSeq) RNA-binding protein 5-like
KO
K13094
RNA-binding protein 5/10
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvn03041
]
111109804
Spliceosome [BR:
cvn03041
]
Complex A
Other components
Complex A specific factors
111109804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
G-patch
OCRE
G-patch_2
Zn_ribbon_RanBP
DUF7066
zf-ChsH2
CREPT
Motif
Other DBs
NCBI-GeneID:
111109804
NCBI-ProteinID:
XP_022301752
UniProt:
A0A8B8BEE7
LinkDB
All DBs
Position
8:complement(38776128..38794908)
Genome browser
AA seq
875 aa
AA seq
DB search
MEIHPFALQQGPYAIHQGNIGFVSINPPQFNNAGEEYEEGEYINENYGYEEGGYDLVPGH
LGQKPNMENQADYDRERDRDRSRRRDRDRDGRRRDDRRSSHERDRNRRRDRDRDRDRERG
RDRRDRERSSHRSSDDDRDSDSRDSFHRSDPREDRAGEKWMTDTPTNTVLLRNLPPQVEE
KDIRAELMMFGAPVRDVRLMRRSTGTSRGFAFVEFQSVADAQRWMDHYQGVLNIQNHYSA
TMHYSTPKTQPDKGPIHKTDWTCSKCGVHNFKRRDHCFKCNLSREESERKQEGDGFDQVG
TNPCNTLILRGLDALTTEDNILHVMSQISTFPLKNVQIIRDDATNTSKGFGFMELNTVNE
AHQLLDQFNNRVPLEVDGKQLLVNYAKNTFSTVMATLTAAANQFGTPQDPNWGAYNQTAA
VSAAQQQGYYDNQNYYQGSDYTQGAYNQYYEGTQTDSTNAAAAVAQAAINKKLAAKNSTP
QKKGQNKEPPQVPTQEQIASQDYPKYPPPDVSTYQYEETSGYYYDPLTTLYYDANSQYYY
NAQTGQFLYWDADKSTYLPAPTNQAAPGGGAGEGEAPTEKKKKEEKKEKNKMAKKIAKDM
EKWAQSMNKQKEAMKGFNAALKAMNGPNDRKESATADAGYAILEKSAKGGLEDKKLMPPP
TVATNSPSRAAAAGGGKPGLVASYGGDSDDEEGGAEEDSGILDESKLTDWNKLACLLCKR
QFQTKEILIKHQQMSDLHKQNLENLIKAKASAGGSDSGQFQYRDRAKERRDKYGIPPPPE
PRQKRPDLPVPYEQPTKSGIGGDNIGNKLLQKMGWQAGKGLGKSGQGIVNPIEAERRAQA
AGLGMRGSNYGTTAGDDYRESVKKTMFARYHEMDS
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccacccatttgccctgcaacaagggccatatgcaattcaccagggcaatata
ggatttgtcagcatcaatccaccacagttcaacaatgctggcgaggagtatgaagagggg
gaatacataaacgagaattatgggtacgaggaggggggttatgacctcgtaccgggtcat
ctgggtcagaaaccaaacatggaaaaccaagctgactatgacagagaaagggatagagat
agatctaggaggcgtgacagagatagagatgggcgtcgcagggatgaccggagatcctct
catgagcgggacaggaatcgcagacgagatcgggatcgagatagagaccgtgagaggggt
cgagatagacgagaccgtgagagaagctcgcacagatcttccgatgatgacagggactct
gacagtcgtgacagcttccaccgctctgacccgagggaagacagagccggagaaaagtgg
atgacagacacacccactaacacagttctactccgcaatctgccaccacaagtggaggag
aaagatatccgagctgagttgatgatgtttggggccccagttcgtgatgtccgtcttatg
aggagaagcacaggtacctctcggggctttgcgtttgtggagtttcagagtgtggctgat
gcccagcgctggatggatcattatcagggcgtgcttaacatccagaatcattactcggcc
acaatgcattacagcaccccaaagacccagccagacaagggtcccatccacaagacggac
tggacctgtagcaagtgtggcgtccataatttcaagagaagggatcactgtttcaagtgc
aatttgtcgcgagaagagtctgagaggaaacaggaaggggacggatttgatcaggttggc
accaatccctgcaacaccctgattttgcgtggattagacgccctgacaacagaggataat
attctccacgtgatgagtcagattagcaccttcccgctgaagaatgtccagatcatccgc
gatgatgccacgaacacgtctaaagggttcgggttcatggagctgaacacggtcaacgag
gctcaccagctgcttgaccagttcaacaaccgcgtcccgctggaggtggacggcaaacag
ctgctggtcaactacgccaaaaacacattctccacggtgatggctactttaacagcagca
gctaaccagtttggtacccctcaggatccgaattggggggcttacaaccagacggcagcc
gtgtctgccgcccagcagcagggttactatgacaaccagaactactaccaggggagcgac
tacacccagggggcctacaaccagtactacgagggcacccagactgattctacaaatgca
gctgctgctgttgcccaggcagccatcaacaaaaagctggcagccaagaacagcacccca
cagaaaaagggtcagaataaagaacctccacaggtgcccacccaagaacagattgcctct
caggactaccccaaatacccgccccctgacgtgtcgacgtaccagtacgaggagacctcg
ggctactactacgaccccctgaccacgctgtactacgacgccaactcacagtactactac
aatgcccagaccggccagttcctgtactgggacgccgacaagtccacctacctcccagcc
cccactaatcaggccgccccagggggaggggcaggggagggagaggcccccacagagaaa
aagaagaaagaggagaaaaaggaaaagaacaagatggccaagaaaatcgccaaggacatg
gagaaatgggcccagagcatgaataaacagaaggaggccatgaagggattcaacgccgcg
ctgaaagccatgaacggcccgaacgacaggaaggagtccgccacggccgacgcaggctac
gccattctggagaaaagcgccaaagggggcttagaggacaagaagcttatgccaccaccc
acagttgctactaactccccaagtcgtgccgcagcggcgggcggtggtaagccgggactg
gtggcttcttacggtggcgacagcgatgatgaagagggcggggcagaggaggattctggg
atactggacgagagcaagctgactgactggaacaagctggcctgtctgctgtgtaagcga
cagtttcagaccaaggagatcctcattaagcaccagcagatgtccgacctccacaagcaa
aatttggagaatctgataaaagctaaggcctcagcaggtgggagtgactcgggacagttt
caatatcgagacagagccaaggaacgccgggacaaatacgggattcccccgcctccggag
ccccgacagaagcggccagatctcccagtcccgtatgaacagcccaccaagtcagggatt
gggggggacaacatcggcaacaaactcctccagaagatgggctggcaggcgggcaagggg
ctgggcaaatctgggcagggtatcgtcaaccccatagaggcggagaggcgtgcacaggcg
gcaggactcggaatgaggggatctaactacggcaccaccgcaggtgacgattacagggag
tccgtcaaaaagaccatgtttgccagataccacgaaatggactcctga
DBGET
integrated database retrieval system