Crassostrea virginica (eastern oyster): 111110314
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Entry
111110314 CDS
T09197
Name
(RefSeq) ATP-binding cassette sub-family A member 3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111110314
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvn02000
]
111110314
Transporters [BR:
cvn02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
111110314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
SMC_N
AAA_22
AAA_23
MukB
Rad17
Microtub_bd
Motif
Other DBs
NCBI-GeneID:
111110314
NCBI-ProteinID:
XP_022302460
UniProt:
A0A8B8BGG9
LinkDB
All DBs
Position
8:complement(12491082..12532064)
Genome browser
AA seq
1705 aa
AA seq
DB search
MVAGYFTQFLLLAWKNVLLQRRKICVTVFEIVLPLAFPILLRIIRNLTDTKPTLQEATLY
KEEPVVNSNFLDTQILYSPNTTLIHGILENASLLIKDQGSYFAPSWKGFNTEVDLLSHIQ
RTYSGFEFYTNDITAVVFDPSQDYSSVLPNDISYKIRIDSVWQWKTDLIYEKKLYDMGPS
RSENYRMTNFLEVMYGIDAAIIRHYNSSADLMNHKKMRMPYPPYYTYPFGPFIRYSVALT
LVLGLILPVLQLTKEIVYDREKKLKETLKMMGMSSFVYWFSWFFKGFVYLIITLSIVVII
FQAGSNKIFDSSSSSLIFFFFLSYAVSVVAFSFLLSSFFNKANTASYFCAFVFFITINPH
FGLDSKYADMTRSQKMALCLINNMAMAIGLTTAVEYEVTGKGVQWDSFTKPPTVDSNFTF
GDVILMLWIDSAIYFLITWYIDGVRPGEYGIPQPFYFPFTKTYWCGGRQIKNTIADDVNH
DPKYFEDDPKGLSVGISMNRLRKVYKSGMKKIVAVEGTSLNIYQGQITALLGHNGAGKTT
TMSMLTGFIPSTSGSARVNGYDVENDISSVRGSLGLCPQHNILFDNLTVKEQLEFYYMLK
VCNRATLDHDITETLKVFQLMEKKNDLAGTLSGGQKRKLSVAIALIGGSKVIILDEPTSG
MDPGARRQMWDILQKFKEDRTIVLSTHFMDEADVLGDRIAIMAGGVVKCCGTSLFLKKLY
GAGYHLIIEKEPNCVDMSLMEVVKSHIPSASLEMQVGAEMTVLLPTEESTKFEALFTDLE
EKGTKLGIRSFGVSATTMEEVFLRVKDDEENMGLMSKENETDTHQIQFEIHDQESFTPHM
ADAHDDLDFNKGLRKNTGVSIALQQYYGLLNKRALHMWRSRFMILIQLVIPVLLAVFGLL
ADQSMSELELAYQTDPPLSLNLNQFPNSISTVTQGESPTATSKNLRQAYSQWFKKRGLGV
VQYNPSINFDINKFWLKKIEEIGLRTFTLRYVIGFGVEGDNLISYYNGEDIHSSAISLSN
TMNFLLKFYCGESKNIQTINDPLPGPDELRSASRSSGIVMFKGLSLAQSILFGLACLVAS
FSVFHIREKSSGAKHLQKVCGVSSRVFWFANLTWDFFHFLPPIFIILICFAGFKIPAFTE
DGRLGIVFFCFLLFGLASIALMFVLHFIFKSPAGGTVAMIIIFTVAGVFTLVTVTLLLQS
KETKSAAETMDDVFMVFFPHYCLGKSFINIYVRYNLRNICLNPKPTNIIQVLSSGASNTL
CPDDNYLEWSYPGCGKYLFMMGLQCIVYMALVLLIDSGRLQPVLYRIFCKDKSVSDPDQA
LVQDSDVIEEANRVNSTQVDNLMAFDKLIIKNLKKTYGLVSKFHAVKEISVGISEQECFG
LLGQNGAGKTTTFKMLTGDVMVSSGQAYVNGFNVKSQLREVHQCLGYCPQFDALIDTLTG
REILTLYARLRGVRDGEIRRVVRDLLEAVTLTEYADKLCGTYSGGNKRKLSTAIAIVGDP
PFLMLDEPTTGVDPAARRQIWNVLSNIRSSGRTLVLTSHSMEECDALCTKIVIMVNGKFV
CFGSPQHLKNKFAQGYTLTVRLSRDESGNAVAAGTLCDFLVREFPGTAVFDDHQGYLDFR
IPHSSLSLSKLFKEMERTKAEFGVEDYSVHQTTLEQVFLSFTRQQLPAVEKKGACPCFRS
KRAYEGRIIQAPLPSYDQSVGTQFV
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggtggctggttatttcacccagtttctcttgttggcgtggaaaaacgttcttctacaa
agacgaaaaatatgtgtgaccgtttttgaaattgtgcttccattggcgtttcctattttg
ctaagaataatccgaaatctgaccgacactaaaccgaccctgcaagaggctaccctttac
aaggaggaacccgttgtaaacagtaattttcttgatacccaaattctatactctcccaac
accacgctcattcatgggattttggagaatgctagtttgctcataaaagatcaaggaagt
tatttcgcaccatcctggaaaggttttaatactgaagtggatcttcttagtcacatccaa
cgcacgtactctgggttcgagttctacaccaatgatatcacagcagtagtttttgatcca
tctcaagactatagttcagttttaccaaatgatatctcgtataagattcgaattgatagt
gtatggcaatggaagacagacctcatatacgagaaaaagttgtacgatatgggaccatca
cgtagtgagaattataggatgacaaattttcttgaagtcatgtatggaatagatgctgca
atcattaggcactacaactcctctgctgatttgatgaaccacaaaaagatgaggatgccc
taccctccctactacacctacccgttcggtcccttcatcagatattccgtcgctctaacc
cttgtcttaggactgatcttacccgttctacagctgaccaaagaaattgtttacgaccga
gagaagaagttaaaagaaacgctgaaaatgatgggaatgagttcgtttgtttactggttt
tcctggtttttcaaaggattcgtctacttgatcattaccttatcgatcgtcgttatcatc
tttcaagcaggatctaacaagatctttgattcttcgagttcctctcttattttctttttc
ttcctgtcgtatgctgtgtcggttgtagcattcagttttctccttagcagctttttcaac
aaagcaaacacagcatcctacttttgtgcatttgtgtttttcatcacaattaacccacat
tttgggttggattcaaagtacgcagatatgactcgctcccagaagatggctctttgcttg
ataaacaatatggcgatggcaattgggttaactactgctgtggagtacgaagtaacagga
aaaggagtccaatgggattcattcactaaacctcctactgttgacagtaattttaccttt
ggggacgttatcttgatgctttggatagatagcgccatatacttcctgatcacgtggtac
attgatggcgtcaggcccggcgaatatggaattccgcagccattttattttccatttacg
aaaacatattggtgtggtgggagacagattaaaaacactatcgcagacgatgtgaatcac
gatccaaagtattttgaggatgacccaaaggggctcagtgttgggattagtatgaaccgc
cttcgtaaagtctacaaatccggtatgaaaaaaatagttgctgtagagggaacttctctc
aatatctaccaagggcagatcaccgctcttctgggccacaatggcgcaggaaaaaccacg
actatgtccatgctgactggttttattccttcgacgtccggttctgccagagtaaacgga
tatgacgtagaaaacgatatcagtagtgtgagggggagtttaggcttgtgtccgcagcac
aatatcctgtttgacaacttaacagttaaagaacaactggaattttattacatgcttaaa
gtgtgcaacagagcaaccttagaccacgatatcacagaaacactgaaggtctttcaactt
atggaaaagaaaaatgatttagcagggactttatctggtggtcaaaaacgcaaattatct
gttgcaatagctctgattggaggatccaaggtaattattcttgatgaaccaacctctggt
atggatcctggtgcaaggcgccaaatgtgggatatacttcagaagtttaaggaggacaga
acgatagttttgtccactcatttcatggacgaagcagatgtccttggtgaccgcatagca
atcatggcaggtggtgttgtgaagtgctgtggaacttcattgtttttgaaaaaactctat
ggtgcggggtatcatttgatcattgaaaaagaaccaaattgtgttgatatgtctctaatg
gaagtcgtaaaaagccacattccctcagcatctttagaaatgcaggtaggcgccgagatg
accgtgcttctgcctacagaagaatctacaaagttcgaagcattgttcactgatttggaa
gagaaaggtacaaaacttgggattaggagcttcggcgtgtcggcaacaacaatggaagaa
gtgtttctaagggttaaggatgacgaagaaaacatgggcttgatgtcaaaggaaaacgaa
accgatacccatcaaattcagtttgagatccatgatcaggaatcctttacacctcatatg
gccgatgcgcatgatgatttagattttaataaaggcctgaggaaaaatacaggtgtatct
attgccttacaacagtactatggattgctcaataaaagagctttacatatgtggagaagc
cgatttatgatacttattcagctagttattcctgtgttactggcggtttttggtcttttg
gcagatcagtcaatgtcagaacttgaacttgcatatcaaactgatccgccactgagttta
aatctgaatcaatttcccaactctatttctaccgttacccaaggagaatcaccaacggca
acttcaaaaaacctacgtcaagcgtactcacaatggttcaaaaagagaggacttggtgtt
gttcagtacaatccttccataaactttgatatcaataagttttggttgaagaaaattgaa
gaaattggtctgagaacgtttactttacgttacgttattggatttggagtggaaggcgat
aacttgataagttattataatggagaggatatccattcctctgcgatcagtctttcaaat
accatgaactttctgcttaaattctattgtggggaatcaaaaaacatacaaaccattaat
gacccgctgccagggccagacgagttgagatctgcatctcgatcttcaggaatagttatg
tttaagggtctaagcctggcccaaagcatattattcggacttgcgtgtttagtggcttca
tttagtgtttttcatattcgagagaagtcatctggggctaagcatttgcaaaaagtttgc
ggggttagctcaagagtgttttggttcgctaatctaacctgggattttttccactttttg
cctccaatattcattattctgatttgttttgctggattcaaaatacccgccttcacagaa
gatggcagattgggaattgtatttttttgtttcctattgtttggcttggcatccattgcg
ttgatgttcgtcctgcacttcatctttaagagccctgctggtggtacggtggccatgatt
atcattttcactgttgcgggtgtgtttactcttgtaactgtcacgcttctccttcaatca
aaagaaacgaaaagcgctgccgaaacaatggatgatgtctttatggtcttttttccgcat
tactgcttgggaaagtctttcatcaatatctatgttcggtataacctccgaaacatatgc
ttaaatcccaaacccaccaacattatccaggttttgtcatctggagcttctaataccctg
tgtcctgatgataattatctggaatggagttacccaggatgtgggaaatacttgtttatg
atgggcctgcaatgcatcgtgtacatggcactggttcttttaatagacagtggacgatta
caacctgtgttatatcgtattttctgtaaagataaaagtgttagcgatcctgaccaagct
ctagtgcaagactctgacgtcatagaggaggcaaaccgagttaactccacccaggtagat
aatctaatggcatttgacaaactgattataaagaatctgaagaaaacgtatggcttggtg
tcaaagtttcatgctgtgaaagaaatcagcgtaggaatatcagaacaggagtgctttggt
ttgttgggtcagaatggcgcggggaaaactacgacgtttaaaatgttaactggtgacgtt
atggtctccagtgggcaggcatatgtcaatggatttaatgtcaagagccaacttcgcgag
gtccaccaatgtcttggatactgtcctcagttcgatgcactgattgacacattgacaggg
agggagatcttaaccctctacgcccgactccgtggggtgagggacggggagatcagacgg
gtggttagggaccttttggaggctgtcaccctcacagagtatgcagacaagctttgtggc
acttacagtggtggaaataaaaggaaattaagcactgccattgcaattgttggagatcca
ccatttctgatgttggacgagccgacaacaggcgtggatcctgctgcgcggagacaaatt
tggaatgttttgtctaacatccgatcgagtggaagaacactggttctaacctcacacagc
atggaagaatgtgacgcactttgcactaaaattgttattatggtgaatggaaaatttgtc
tgctttggaagtccacaacatcttaagaataagtttgctcaagggtacaccttaacagta
cgcttatcacgtgacgagagcggaaacgcagtggctgctggtactttgtgtgactttttg
gttcgtgaatttccaggtacagccgtatttgatgatcatcaaggatatcttgatttccgg
attcctcattctagtttatcgctgtcgaaattgtttaaagaaatggaaagaacaaaagcg
gaatttggcgtagaagattattccgtgcatcaaacaactctagagcaagtgtttctttcc
tttacaagacaacagctacccgctgtcgagaagaaaggggcgtgtccctgctttcgatca
aaacgcgcgtatgaagggcggatcatccaggcaccactaccaagctatgatcaatccgta
ggaacccagtttgtgtaa
DBGET
integrated database retrieval system
