Crassostrea virginica (eastern oyster): 111110592
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Entry
111110592 CDS
T09197
Name
(RefSeq) transcription initiation factor TFIID subunit 11-like
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111110592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvn03021
]
111110592
Transcription machinery [BR:
cvn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111110592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
CBFD_NFYB_HMF
TFIID-31kDa
SR-25
SOBP
Motif
Other DBs
NCBI-GeneID:
111110592
NCBI-ProteinID:
XP_022302866
UniProt:
A0A8B8BIT6
LinkDB
All DBs
Position
1:complement(37816992..37827882)
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AA seq
193 aa
AA seq
DB search
MASTSLSIIENKSNDQEKSGNGSEKATDKQSKKSSSSVREKTPEPSTSGVSPTSKQDSAE
KKRKLEPSEAEIKAYKHKKEKQEEERLKMQVLVSNFTEEQLNRYEMFRRAAFPRAAIKRL
MQSITRTSVSHNVVIAMAGIAKVFVGEVVEDALDIMEKNKETGPIQPKHLREAVRRIRKR
DSLFRPKKALLNT
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacatcattatcaataatagaaaacaaaagcaatgaccaagaaaaaagtgga
aatgggtcagagaaggcgacagacaagcaatcgaagaaaagttcttcatcagtacgtgag
aaaacaccggagccatcgacgtctggtgtgtccccaacaagcaaacaggattcagctgag
aagaagaggaaactagagcccagtgaggcagaaatcaaagcatacaaacacaaaaaagaa
aagcaggaggaagaaagattaaagatgcaagtgctggtgtcaaattttacagaggaacag
ctgaacagatatgaaatgtttcgcagagcagcttttccaagggcagcaatcaaacgattg
atgcagtctattacacggacgagtgtgtcacacaatgtggtgatagccatggctggaata
gccaaagtttttgtaggagaggtagtggaagatgcattggacataatggagaaaaacaag
gagacaggaccaattcagcccaaacacttacgagaagctgtaagacgaatcaggaaaagg
gacagtctcttcaggcccaaaaaggctctactcaacacctga
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