Crassostrea virginica (eastern oyster): 111110884
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Entry
111110884 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: acetylcholine receptor subunit beta-type unc-29-like
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04080
Neuroactive ligand-receptor interaction
cvn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111110884
04082 Neuroactive ligand signaling
111110884
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvn04040
]
111110884
Ion channels [BR:
cvn04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
111110884
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF5924
YscJ_FliF
DUF8620
Motif
Other DBs
NCBI-GeneID:
111110884
NCBI-ProteinID:
XP_022303253
UniProt:
A0A8B8BJ01
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Position
1:7544985..7547717
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AA seq
413 aa
AA seq
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MKYRRCLFFLVFLLFSKKLKAAQFSDAESLFKDLFQNYSTEIRPNQNLSEPTDVHILALL
FSVNDFNEVSGVISIVGGFLLKWHDFRLTWTPNNYGGIESFPISKKKIWVPNIFLINPAN
KMEAVGSEDFVVRMFYSGTMAWVPGGLFKTMCDVNMYTFPFDTQKCSFSVALWGFETSEA
RLVPEVNTSTMETTYYSPNAQWELERTIMKYSDIGNAVVELQIILKRRALYFIINMLAPI
LLLSVLNPLVFVLPVDSGERVSYSITIFLSFAVFMSLISENMPKSSEPMSILSYFLVLTM
AMSTLICILTIVTLRLHFKDSSTQVSTKVRFVLRVLQLKCLCKPCTKVKKXARIRDVINV
DNTFAPSNKEQFEEPQDDLTWKQVAEAFDETFMYYFFFIVLVQWVILGIMIKS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacagaagatgtctatttttcttggttttcctattgttttccaaaaagttgaag
gcggcgcagttcagtgatgctgagtccctattcaaggatttattccaaaactattcaaca
gaaatacgaccaaaccagaacctatcagaaccgactgacgtgcatattttagcgcttttg
ttctctgtcaatgatttcaatgaagtgtcgggagttatatcaattgtaggcggatttctt
ctgaaatggcatgactttcggttaacatggacaccgaataactacggtggcatcgaatca
tttcctatctcaaaaaagaaaatttgggttccaaacatttttttgattaatcctgcaaat
aagatggaagctgttggatctgaggatttcgtggtcaggatgttttatagtggcaccatg
gcgtgggttcctggaggtttattcaagacaatgtgtgatgtaaatatgtatacatttcct
tttgacacacaaaaatgctcgttttctgtcgcgctttggggttttgagacatcagaggcc
cgattggttcctgaagtcaacacgtctacgatggaaacaacatattattctccaaatgct
cagtgggaactagaaagaactattatgaagtactcagatatcggtaatgcggtagtggaa
ctacaaataattttgaagagaagagcgctttactttatcatcaatatgctggcccccatc
ctgcttctttctgtactaaaccctcttgttttcgttttaccagttgatagtggtgaacgg
gtgtcctattccatcaccatatttctgtcctttgccgtttttatgtctttgatcagcgaa
aatatgcccaagtcttctgaaccaatgtccatattgtcctacttcctagtattgacgatg
gcgatgagcacactaatatgtattttgaccattgtcacgttgcgcctgcacttcaaggac
tcaagcacacaggtatctacaaaagttagatttgtactccgtgttttgcaactaaaatgt
ttatgtaaaccgtgtacaaaagtgaaaaagnacgcacgtattcgtgatgttataaatgta
gacaacacgtttgcacctagtaacaaggaacagtttgaagaaccacaggacgatttgaca
tggaagcaggtcgccgaggcttttgacgagacttttatgtactatttcttttttatagtt
ttggtacaatgggtaatccttggaataatgataaaaagttga
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