Crassostrea virginica (eastern oyster): 111111061
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Entry
111111061 CDS
T09197
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03018
RNA degradation
cvn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111111061
09123 Folding, sorting and degradation
03018 RNA degradation
111111061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111111061
03041 Spliceosome [BR:
cvn03041
]
111111061
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111111061
mRNA degradation factors
5'-3' decay
Lsm complex
111111061
Spliceosome [BR:
cvn03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111111061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
111111061
NCBI-ProteinID:
XP_022303529
UniProt:
A0A8B8BL12
LinkDB
All DBs
Position
9:41058569..41067933
Genome browser
AA seq
114 aa
AA seq
DB search
MSQAPKQNQQSGDKDKEKKKKETILDLAKYLDKTIRVKFSGGREAAGVLKGYDPLLNLVL
DDTTEYLRDPDDPYKLTEDTRTLGLVVCRGTSVVLICPADGMEAIANPFVQQEG
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaggctccaaaacagaatcagcaatctggagacaaagataaggaaaagaagaaa
aaggagacgattctagacttggccaaatatctggacaaaacaatacgggtcaagttcagc
ggtggcagagaagctgctggcgtcctaaaaggttatgaccctctcctgaatctagtgttg
gacgataccacagaatacctcagggatcctgatgacccctacaagctgacagaggacact
cgtaccctgggtctcgtcgtgtgtcgtggaacatcggtcgttctcatctgtcccgccgac
ggaatggaagccattgccaacccttttgttcaacaggaaggataa
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