KEGG   Crassostrea virginica (eastern oyster): 111111377
Entry
111111377         CDS       T09197                                 
Name
(RefSeq) aladin-like isoform X1
  KO
K14320  aladin
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111111377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvn03019]
    111111377
Messenger RNA biogenesis [BR:cvn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     111111377
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40 ANAPC4_WD40 WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st eIF2A Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_ELP1_1st Beta-prop_WDR35_TULP_N PD40 Beta-prop_EIPR1 EIF3I WDR90_beta-prop_4th Beta-prop_EML Beta-prop_HPS5
Other DBs
NCBI-GeneID: 111111377
NCBI-ProteinID: XP_022304035
UniProt: A0A8B8BL20
LinkDB
Position
9:55624092..55657540
AA seq 514 aa
MCDNSVFSIFPPAPAQGTVTVCEQHGGLLSSPAQSKPYKKLPGYPDVVLSGGGSSSLTHR
ENAKSAFLPHNETVWKRALHAWYEMGSPGVFEEIVNSSDEVPDWVAVLAKKTLTLVRWAT
SLHGSIFPHLSMSNEEIITEFSPIVNWSRSPVRAFAWHPHTLKFAYALGDDSIKVHSGKS
DLVPTLKHKLQKNVADLAWQPQSASVLAVACQSCVLIWHVEPTSLASRPSTSSCQVLQQN
HHAPVTCLAWDPSGRILLSASPVDTSLMAWDVPMETCVPLRRLGGGGVSLLRWSPDGSKV
FSATPSQLFRVWETRTWTCEVWTKCTSRCKAACWSPDGRTLLFATENEPIIYSLTFSTNI
DDTSTVIGGSQSAVVSVSLAEVDLKTEDGETTKVGGLVQSMVMDRHGERLAVTLHDEKGQ
VLPYVALFRTRTNPILEITPCGLVQGETGEYPLHVSFQPSFDRGALLSVVWSSGALRYVP
LYFIPSDEIQNAQYHQPAPPTLNGNILSPIARHT
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgtgtgacaacagtgtcttctccatctttcctcccgcccccgcccagggaaccgtcacg
gtctgtgaacaacatgggggcctgctcagctcacccgcccagtccaaaccgtacaaaaag
ttgcctggttaccctgatgtggtattgtctgggggaggatccagcagtttgacacacaga
gagaatgccaagtcggccttcctcccccacaatgagacggtctggaagagggccctccac
gcctggtatgagatggggtctccaggtgtttttgaggaaattgtgaacagcagtgatgaa
gttcctgattgggttgctgtccttgccaaaaagaccttgaccttggtgcgatgggccacc
tcccttcatggatccatcttccctcatctctcgatgtccaatgaagaaatcattactgaa
ttctctccaattgtaaactggtccaggagccctgttcgagctttcgcctggcatcctcac
acccttaaatttgcttacgccctcggggacgacagcatcaaagtgcactctgggaagagt
gatttagtgcccactctcaaacacaagctgcagaagaatgtggcagacttagcctggcaa
ccccagtctgcctcagtcctggctgtagcttgtcagtcctgtgttctgatctggcatgta
gagcccacttcattagcttcaagaccgtccactagctcctgtcaggtgttacaacagaac
caccacgccccggtcacctgcctggcgtgggatcccagcgggaggatcttactctctgcc
tcccctgtggatacctccctcatggcgtgggatgttcccatggagacgtgcgttccactt
cgtcgacttggagggggaggggtctcacttttgagatggtcccctgatggatccaaagtt
ttctctgccacaccctcacagcttttcagagtatgggaaacgagaacatggacttgtgag
gtttggaccaaatgtacaagtcgctgtaaggcagcttgttggagtcctgatggcagaacc
ttgctgtttgctacagaaaatgaaccaatcatctactctcttacattctccaccaacatc
gatgatacatctactgtgattggtggatcccaatcagctgttgtgtctgtgagtttagca
gaggtagatttaaagactgaggatggagaaaccactaaggttggaggtcttgttcagagt
atggtgatggatagacacggagaaagattggctgtcaccctacacgatgagaaaggtcag
gtgctgccctatgtagccttgttcagaacacggaccaatccaatactagagatcacacca
tgtggactggtacaaggagagaccggggaataccctctacacgtgtcttttcagccaagc
tttgatcgaggggcgcttctctctgttgtttggagctccggggcacttcgctatgttccc
ctgtacttcatcccaagtgacgagattcagaatgcccagtatcatcaaccggcgccacct
acccttaacggcaacatcctgtcccccatagcacgacacacgtaa

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