Crassostrea virginica (eastern oyster): 111111377
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Entry
111111377 CDS
T09197
Name
(RefSeq) aladin-like isoform X1
KO
K14320
aladin
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111111377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111111377
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111111377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
ANAPC4_WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
eIF2A
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_ELP1_1st
Beta-prop_WDR35_TULP_N
PD40
Beta-prop_EIPR1
EIF3I
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
111111377
NCBI-ProteinID:
XP_022304035
UniProt:
A0A8B8BL20
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Position
9:55624092..55657540
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AA seq
514 aa
AA seq
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MCDNSVFSIFPPAPAQGTVTVCEQHGGLLSSPAQSKPYKKLPGYPDVVLSGGGSSSLTHR
ENAKSAFLPHNETVWKRALHAWYEMGSPGVFEEIVNSSDEVPDWVAVLAKKTLTLVRWAT
SLHGSIFPHLSMSNEEIITEFSPIVNWSRSPVRAFAWHPHTLKFAYALGDDSIKVHSGKS
DLVPTLKHKLQKNVADLAWQPQSASVLAVACQSCVLIWHVEPTSLASRPSTSSCQVLQQN
HHAPVTCLAWDPSGRILLSASPVDTSLMAWDVPMETCVPLRRLGGGGVSLLRWSPDGSKV
FSATPSQLFRVWETRTWTCEVWTKCTSRCKAACWSPDGRTLLFATENEPIIYSLTFSTNI
DDTSTVIGGSQSAVVSVSLAEVDLKTEDGETTKVGGLVQSMVMDRHGERLAVTLHDEKGQ
VLPYVALFRTRTNPILEITPCGLVQGETGEYPLHVSFQPSFDRGALLSVVWSSGALRYVP
LYFIPSDEIQNAQYHQPAPPTLNGNILSPIARHT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacaacagtgtcttctccatctttcctcccgcccccgcccagggaaccgtcacg
gtctgtgaacaacatgggggcctgctcagctcacccgcccagtccaaaccgtacaaaaag
ttgcctggttaccctgatgtggtattgtctgggggaggatccagcagtttgacacacaga
gagaatgccaagtcggccttcctcccccacaatgagacggtctggaagagggccctccac
gcctggtatgagatggggtctccaggtgtttttgaggaaattgtgaacagcagtgatgaa
gttcctgattgggttgctgtccttgccaaaaagaccttgaccttggtgcgatgggccacc
tcccttcatggatccatcttccctcatctctcgatgtccaatgaagaaatcattactgaa
ttctctccaattgtaaactggtccaggagccctgttcgagctttcgcctggcatcctcac
acccttaaatttgcttacgccctcggggacgacagcatcaaagtgcactctgggaagagt
gatttagtgcccactctcaaacacaagctgcagaagaatgtggcagacttagcctggcaa
ccccagtctgcctcagtcctggctgtagcttgtcagtcctgtgttctgatctggcatgta
gagcccacttcattagcttcaagaccgtccactagctcctgtcaggtgttacaacagaac
caccacgccccggtcacctgcctggcgtgggatcccagcgggaggatcttactctctgcc
tcccctgtggatacctccctcatggcgtgggatgttcccatggagacgtgcgttccactt
cgtcgacttggagggggaggggtctcacttttgagatggtcccctgatggatccaaagtt
ttctctgccacaccctcacagcttttcagagtatgggaaacgagaacatggacttgtgag
gtttggaccaaatgtacaagtcgctgtaaggcagcttgttggagtcctgatggcagaacc
ttgctgtttgctacagaaaatgaaccaatcatctactctcttacattctccaccaacatc
gatgatacatctactgtgattggtggatcccaatcagctgttgtgtctgtgagtttagca
gaggtagatttaaagactgaggatggagaaaccactaaggttggaggtcttgttcagagt
atggtgatggatagacacggagaaagattggctgtcaccctacacgatgagaaaggtcag
gtgctgccctatgtagccttgttcagaacacggaccaatccaatactagagatcacacca
tgtggactggtacaaggagagaccggggaataccctctacacgtgtcttttcagccaagc
tttgatcgaggggcgcttctctctgttgtttggagctccggggcacttcgctatgttccc
ctgtacttcatcccaagtgacgagattcagaatgcccagtatcatcaaccggcgccacct
acccttaacggcaacatcctgtcccccatagcacgacacacgtaa
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