Crassostrea virginica (eastern oyster): 111111537
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Entry
111111537 CDS
T09197
Name
(RefSeq) probable nuclear hormone receptor HR3 isoform X1
KO
K14033
nuclear receptor subfamily 1 group F member 4
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111111537
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cvn03310
]
111111537
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111111537
Nuclear receptors [BR:
cvn03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
111111537
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CBP_BcsO
Motif
Other DBs
NCBI-GeneID:
111111537
NCBI-ProteinID:
XP_022304282
UniProt:
A0A8B8BLT1
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Position
9:complement(40439946..40471179)
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AA seq
542 aa
AA seq
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MNLGRHRLKEGSFHECCGKIMSNDMKDFSATTLDQAPVSSLDHASMAMTSEGMMQIIPPP
TVSINKSPHGGPLDNLKMMPGNDGHSDNAIRSSPPQKVKPDSSRKPSESTKAQIEVIPCK
VCGDKSSGVHYGIITCEGCKGFFRRSQAGPVNYQCPRNKNCVIDRVNRNRCQFCRLQKCL
ALGMSRDAVKFGRMSKKQRERVEDEANFVKQTRLNGYDSSCGMPPSNNNNQFSIYNDCHL
MYTSNGYAYTMPSPASESQPETPVSPDPPAYTPTTPTPTTQTPHPIALLRAVDLMDPVML
GKAVTEAHMRTCLYTSDQIQHIQSSLTPQEIIDTFKSMTRSQLWSEVAEKITIAVQQIIE
FAKMLPGFMDLSQDDQIMLLKAGSFELALIRACRVYDNQTNNIVFGNVSVPLSVFSAFNE
EECHLREQVFEFVRNVIQLKLTESQLALFSAVVLIRADRPGLKDIADVQKLNDKVLTALK
QELGKTHSDENVLTRLMQLTWTLRQLSSQHIVLLNKYKLQNPHVEFPALHKELFSVEGLE
GS
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaggtcgacataggttaaaagagggaagttttcatgaatgctgtggcaaaatt
atgtcaaacgatatgaaagacttttctgctacaacccttgaccaggcaccagtttcctcc
cttgatcatgcttccatggcgatgacctcagaaggaatgatgcaaatcatcccccctccc
acagtcagcatcaacaagtccccccatggggggcctctagacaatctcaaaatgatgcct
ggcaacgatggtcactcagacaatgccatccgcagctcacccccgcagaaagtcaagcct
gatagcagccgcaagccttcagagtccacaaaagcccagattgaggtcatcccctgtaag
gtgtgtggggacaagtcctcaggtgtccactacggaatcatcacctgtgaaggatgcaag
ggtttttttcgccggagtcaggccggtcctgtgaactaccagtgtcccagaaacaagaat
tgtgtcattgatcgtgtcaaccggaaccgctgtcagttctgtcgacttcagaagtgcctg
gcgctgggaatgtctcgagacgctgtgaagtttgggagaatgtcaaagaaacagagagag
cgggtggaagacgaggccaactttgtcaagcagacgcggctgaacgggtacgattcctcg
tgtggaatgccacctagcaacaacaacaatcagttctctatatacaatgattgtcatctg
atgtatacctcaaatggctacgcctacacgatgccttccccggcctccgagagccagccc
gagacgcccgtgtcaccagaccccccagcctatacccccaccacccccacccccaccaca
cagactccccaccccatcgccctgctgcgggctgtcgacctcatggacccagtgatgctt
ggcaaagcggtgactgaagcccacatgaggacgtgtttatacaccagtgatcagatacag
cacatccaatccagcctcacccctcaggaaatcattgacaccttcaaatctatgacacgg
agtcagctgtggtcagaagttgcggagaagatcacgattgccgtgcaacaaatcatagag
tttgccaaaatgctgccggggttcatggacctctctcaggatgatcagatcatgttgtta
aaagcagggagcttcgagctagccctcattcgagcctgtcgtgtctatgacaaccagacg
aataacatcgtctttggaaatgtcagtgtccccctgtctgtatttagtgcgtttaatgag
gaggagtgtcatctaagggagcaggtgtttgagtttgtgcggaatgtgattcagctgaag
ttaacggagagtcagctggcgttgtttagtgcggtcgtcctaatccgagcagatcgacct
ggccttaaggacatagcagacgttcagaaactgaacgacaaggttttgaccgccctaaaa
caagaactcgggaaaactcactcggacgagaacgttttgactcgtctgatgcagctcacg
tggacgcttcgacagctcagctcccaacacatagtgcttctcaataaatacaaactgcaa
aatccccatgtagagttccctgcccttcataaagagctcttcagtgtggagggtttagaa
ggttcctag
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