Crassostrea virginica (eastern oyster): 111111605
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Entry
111111605 CDS
T09197
Name
(RefSeq) transcriptional repressor NF-X1-like isoform X1
KO
K12236
transcriptional repressor NF-X1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111111605
04121 Ubiquitin system [BR:
cvn04121
]
111111605
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
111111605
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
111111605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
R3H
Motif
Other DBs
NCBI-GeneID:
111111605
NCBI-ProteinID:
XP_022304388
UniProt:
A0A8B8BM37
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All DBs
Position
9:complement(71132334..71152355)
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AA seq
1407 aa
AA seq
DB search
MSYYYATNQSEDQAGYFTSNEFAQYSYPPPVHLPPPNVTPEFYSHLPPPGQFYTPNVNNF
QPEPYNQSSEYTRNDRGPHSSGGFSNYNKNEGRSNQDWRHSQQSSSRGRGQGYRRGSTQG
YRGGQKFGGHERDDRYYHERNRDQGYERTIGDGFDSRSNHGYGKGHGFEQGQGHGYERGK
KTGKRGSVLEQDSRHKRESFGKKQRENDTEGKENNFVKGKANLHVGIGKSEESNSKTCDG
KKLIDGKSSIRSSEGGDTCDAKSDPLEGNNRGCSIDSQGPESEVIERKSKTYSSDQDFLE
KNFASFTKKSSNKASVTEYDGNPKNQKGHSEKPRSGHQQSHPKNYSEKPQSERQTSRGKD
QSQRPKSGKQQPPHKDNYSEKPKSGKQPLHNDYSDRPPKSGHQQSKPNPYPADDQRAGQN
PRNRYYSDYGKNRQSDDYYADKRQYSSKKDNRFNEKNSPRDGVNKSESRKESSCHNEEGD
GGRVDSGNRREMISRERERKDSDRDSVHSKDSSNYGNNDRKLSELSADWSGVLSERSGSR
TVSESQSEASDDLNGDQRRKHEKKDIHYKPMRKQNNPYHHPQQHQKGHGKGKPPVVRTAS
GRVDESQRALLIEQLTMGTYECMVCCDTIRGQSAVWSCNGCYHIFHLRCIKTWAKSPTAK
VEGLDHGWRCPACQNTADKIPFQYRCFCGKMRDPEWNRMETPHSCGEVCKKNRSANCKHH
CNILCHPGPCPLCNAVVPRPCLCGKQSHSVKCSSIEVFRCSNVCERQLNCGKHSCQEVCH
AGPCEPCKEVIKQECYGKHETREVICGSSQSFMDSYCCEEKCHLQLDCGNHECEEICHQG
PCPPCLLLPEAIHSCPCGARELSDLSPTPRQSCLDPIPTCGGKCGKKLKCGPPKKPHVCE
RKCHEGPCGSCELTTELTCRCTKFKKEFPCTEVMKLKDRVFRCERKCNKLRSCQRHKCGQ
HCCVSEEHDCNLICGKKLPCGLHKCEEPCHRGNCPPCLMASFDELTCHCGAEIMYPPIPC
GAKPPECKQWCNRVHTCDHEVQHRCHSDENCPPCTVLTEKWCMGNHEMRRNIACHRDNIS
CGLPCSEVLPCQQHKCTKTCHSGPCQGEGERCKQPCQLKRSTCDHLCMSECHADKPCPTV
PCKAQVKIKCSCGHKEAMVTCQSLDSKEFKSSRTMQSLASSLGAGQSVDISHLTSSSSKK
SKKSVLECDAECALIERNRRLALALEIKNPDLSNKLGTPSFSDFLKDFAKKNLHFAASVE
KNFNDLVVNAKKAKQAYRSHSFPSMNRDQRRLIHELAECYGCETQSYDYEPNKNVVATAH
KEKCWLPNVTLTSYVQRETNPKAPVPIPHRYNESELRETAMAAKHSFEVLKDKPIERVQR
SNDFKDKSSTSNPGAAKVIDYFDFSTK
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgtcctactattatgctacaaaccaatcagaagaccaagcaggatactttacctcaaac
gagtttgcacaatattcataccctccccctgttcatttgcctcctccaaatgtaacacct
gagttttacagccatctaccacccccaggtcaattttatactccaaatgtgaataatttt
caacctgagccatataatcaaagctctgaatacacaagaaatgataggggacctcattca
tctgggggattttcaaattataacaaaaatgagggtagatctaaccaagactggagacat
tctcagcagagtagttctagaggaagaggtcaaggttacagaaggggtagcacccaagga
tatagagggggtcagaaatttggaggacatgaaagagatgataggtactatcatgagagg
aacagagatcaggggtatgaaagaactataggggatggttttgatagcagatcaaatcat
gggtacggaaaaggtcatgggtttgagcaaggtcaaggccatgggtatgaaagaggcaaa
aagacaggaaaacgtggctcagttcttgaacaagattccagacataaaagggaaagcttt
ggtaaaaaacagagagagaatgatacagaaggaaaagaaaacaattttgttaaaggaaag
gccaacctccatgtaggtattggaaaatctgaagagagtaatagtaagacctgtgatggg
aaaaaattgattgatggtaaaagttcaatcagaagcagtgaagggggtgatacatgtgat
gcaaaatcagatcctcttgaggggaataacagagggtgttccattgacagccaaggtcca
gagagtgaggtaatcgaaaggaaaagtaagacatacagctctgatcaggactttcttgag
aagaactttgcttcatttactaaaaaatccagcaataaagcaagtgtgacagaatatgat
ggaaatccaaaaaatcagaaaggtcattccgaaaaacccaggagtggacatcaacagtct
catcctaaaaactattcagaaaaaccccaaagtgaaaggcaaacatcacgtggtaaagac
cagtcacaaagacctaaaagtggaaaacaacaaccacctcacaaagacaactattcagag
aaacctaaaagtggaaagcaacctttgcataatgactattctgatcgacccccaaagagt
ggacaccaacaatccaagcctaatccttatcctgcagatgaccagagagctggccagaac
ccccgcaataggtattactctgattatgggaaaaaccggcagagtgatgactattatgca
gataaaagacaatactccagtaaaaaggacaaccgttttaacgagaaaaatagccctaga
gatggtgtgaacaaaagtgaaagtagaaaggaaagtagttgtcataatgaagagggtgat
ggaggaagagtggattcggggaatagaagagaaatgatttccagggagagggaacgtaag
gactcagatagagattccgttcattcgaaggactcttcaaattatggaaataatgacaga
aaactttcggagctctccgcagactggagtggggtgttgtcggaaagatcgggaagtaga
acggtgtcggagtcgcagagcgaggcctctgacgacctgaatggggatcagaggcggaaa
cacgagaagaaggacatccactacaaaccaatgagaaagcagaataatccgtaccatcac
ccacagcagcatcagaagggccacgggaaaggcaagccaccggtggtcagaacagcatcc
gggcgagtggatgaaagccaaagagcgctgttgatcgagcagctgacaatgggtacatac
gaatgcatggtgtgttgtgacacaattcgaggacagagtgccgtttggagctgtaatggc
tgctaccacatcttccacctccgctgtatcaagacgtgggccaagtcacccacagccaaa
gtagagggtctggatcatggctggagatgcccagcttgtcaaaacactgctgacaagatc
cccttccagtacaggtgtttttgtggaaaaatgcgagacccagagtggaaccgaatggag
acaccacatagctgtggggaggtgtgcaagaaaaatcgctcggcaaactgcaagcaccac
tgtaacatactgtgccatcctgggccctgccccctgtgtaacgcggtcgtcccccgtccc
tgtctgtgcgggaaacagagccattcggtaaagtgcagtagtatagaggtgttcagatgc
tccaatgtatgcgagcgccagctcaactgtggcaagcattcctgtcaggaagtctgccat
gctggcccttgtgaaccctgtaaagaggtcatcaagcaagaatgctacggtaaacatgaa
acaagggaggtaatttgtggaagcagccagtctttcatggactcgtactgctgtgaggag
aaatgtcatttacaactggactgtggcaatcatgaatgtgaggagatttgtcaccagggc
ccctgtccaccttgtctcctgctcccagaggccattcattcctgtccctgtggggccaga
gagctgagtgacctcagccccaccccccgacagtcctgccttgaccctattcccacatgt
gggggaaaatgtggtaaaaagctgaagtgtggcccacccaagaagccccatgtttgtgag
cggaagtgtcacgagggaccctgtgggtcatgtgaactcacaacagaactgacctgcaga
tgcacaaagttcaagaaggagttcccctgcactgaagtcatgaagttaaaagaccgggtg
ttccgctgtgagaggaagtgtaacaagctgcggtcctgtcagagacacaagtgtggacag
cactgctgtgtgtcagaagaacatgattgtaatttgatttgtggtaagaaacttccatgt
ggtctacacaagtgtgaggaaccctgtcaccgtggtaactgtccgccatgcctgatggcc
agttttgacgagttgacgtgtcactgtggggctgagatcatgtatcctcccattccgtgt
ggggcaaagccccccgagtgtaaacagtggtgcaatcgagttcacacttgtgatcatgaa
gttcaacatcgatgccacagtgatgagaattgtccaccgtgcactgtgctgactgaaaag
tggtgcatgggaaatcatgagatgagaagaaatattgcctgtcaccgtgacaacatctct
tgtggtttaccctgcagtgaagtattgccttgtcaacagcacaagtgtactaaaacctgc
cacagtggcccgtgtcagggggagggagagaggtgtaaacagccgtgtcagctgaagagg
agcacctgtgaccacctgtgtatgagtgagtgccacgccgacaagccctgccccaccgtc
ccctgcaaggcacaggtgaagatcaaatgcagctgcggtcataaggaggccatggtaaca
tgtcagtcattggatagtaaagagttcaaaagcagtaggactatgcagagtctagctagc
tccctgggggctggacagagtgtggacatctcccatctgacctcctcctcctccaagaaa
agcaaaaagagtgtactggagtgtgatgcggagtgtgccctgatcgagcgcaatcgacgg
ctggccttggccctagagataaagaaccccgacctcagcaacaagctgggcactccctcc
ttctccgacttcctcaaggactttgcgaagaaaaatcttcattttgctgcaagtgtagag
aaaaactttaatgatttggtggtcaatgccaaaaaggctaagcaggcatatcgctctcat
tcctttccgtctatgaaccgtgatcagcggcgactgatccacgagctggcagagtgttac
ggatgtgaaacacaaagctatgattacgaacccaacaaaaacgtggtggctacagctcac
aaggagaagtgctggctgcctaatgtgaccttgacctcctatgttcagagagagacaaac
cccaaggctcctgttcccatcccccacagatacaatgagtcggagctcagagagactgca
atggctgctaagcatagttttgaggtgctcaaggataaacccattgaaagagtccaaagg
tcaaatgacttcaaggacaagagctcaacctcaaaccctggagctgctaaagtgatcgat
tattttgacttttccaccaagtga
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