KEGG   Crassostrea virginica (eastern oyster): 111111977
Entry
111111977         CDS       T09197                                 
Name
(RefSeq) nuclear receptor ROR-beta-like
  KO
K08533  RAR-related orphan receptor beta
Organism
cvn  Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cvn03000]
    111111977
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:cvn03310]
    111111977
Transcription factors [BR:cvn03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    111111977
Nuclear receptors [BR:cvn03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   111111977
SSDB
Motif
Pfam: zf-C4 Hormone_recep Spike_JR1
Other DBs
NCBI-GeneID: 111111977
NCBI-ProteinID: XP_022304913
UniProt: A0A8B8BNJ4
LinkDB
Position
9:complement(42260759..42272248)
AA seq 592 aa
MSEGKIISDEKQCLLDGGTTEEPDKSTVTNGVLGLAKHSGKNRRTETEESSMSNTAFGTE
KPIEKLKVKKQRRKRDKYLPNTAPLELPPCKICGKAASGIHYGINSCEACKGFFRRYLKR
NEPYRCTRGGNCVIGQSPTGYMCSGCRLQKCFSLGMSKEGIRQGRYTLQERTNAIIEMRK
RQDEQATQARAENSVRSATQLSPSDYHNRSSTVDVYSDSSILSGHHSASSSPSSSSQLLS
QSSAGSSNLTSGKIQPTCFSSDHPPLMSHIGNSPNLNQSQPIQESIQKSKVVTADWLAYE
SSMASLPASDTSDNLSQGEEDLGSFCSSMEKLMEGYNELKPFTKSLSDDEIHALLNDGFQ
NYSQKIQLFGSMDPLPANTYNEIFKVTDIDVDGRTKILALIRTELVTVIHEYVRFTHGIP
AFKKLLPGDQASLLKAARLEFFLLLGYRSLDPETGMMVSYTGHVLPIKQFCAYAPADMST
SWLEVSRHIRHLQLLPKEHATMLGICLTFTDRCSLDDPGTVEKIQVSLLRLLESLLKERY
GKDGGKQLSKIMDVFVKLRGLNEEFLMLYRKICQDKFLIEHLPELLQFLFDE
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgtcagaaggaaagataattagtgatgaaaagcagtgtttattggatggaggcacaaca
gaagaaccggataaatctactgtcactaacggagtattgggtcttgcaaagcattctggg
aaaaaccgaagaacagagactgaagaatcttctatgagcaacacagccttcggaacagag
aaacccattgagaaactgaaagtcaagaaacagcggaggaagcgagataaatatttgccc
aatacagcaccgctcgagctgcccccgtgcaagatttgcgggaaggctgcgtctggcatc
cattacggcattaactcttgtgaagcttgcaagggatttttccgccgctacttaaagagg
aatgagccttaccgctgcaccaggggaggtaactgtgtgattgggcagtcccccacaggg
tacatgtgttcaggctgccgactacagaagtgtttcagtctcggcatgtctaaggaaggt
attcgtcagggacgatacacactccaggagaggactaatgccatcattgaaatgaggaaa
agacaggatgaacaagccacgcaggcaagggcagagaactccgtaaggagtgccacacag
ctctctccttctgattatcacaatcgatcctcaactgtggacgtttattccgactcatcg
attttatctggtcatcacagcgcttcatcatctccatcctcatcgtcacaattattatct
cagtcatcagcagggtcatctaatttaacatcagggaaaatccaaccaacctgtttttca
tccgaccatccgccacttatgtctcatataggcaactctcccaatcttaaccagtcacaa
ccaatccaggaatccatccagaaatccaaagtcgtaacagctgattggttggcctatgaa
agctctatggctagtctaccagcgtcggatacatcggataatttgtcacaaggtgaagag
gatctgggatccttttgttcctctatggagaaactcatggaaggctataatgaactgaaa
ccattcaccaaaagcttgtcggatgatgaaatccatgccttgttgaatgatggatttcaa
aattacagtcaaaagatacaattgtttggcagcatggacccactacccgcaaacacctac
aacgaaatcttcaaggtcacagacattgacgtggacggacggacaaagatcctggccttg
atcagaacggagcttgtcaccgtgattcatgagtacgtgaggtttactcacggaattccc
gccttcaagaaactgctgcctggagatcaagcctcattactaaaagctgccagactggaa
ttcttcctgctgctggggtatcgctccctggacccggagacggggatgatggtgtcatac
accggccacgtccttcccatcaagcagttctgtgcctacgcccccgctgacatgtcgacg
tcttggcttgaggtgtcacgacacatacgtcatctacagctcctcccaaaagaacatgcc
accatgttggggatttgtctgacgttcacagatcggtgttccctggacgaccctgggacg
gtggagaagatccaggtctccctgctccgactcctggaatccctcctgaaagaacggtac
ggaaaagatggcgggaaacagctgtcaaagattatggacgtgttcgtcaaactgcggggc
cttaacgaggagttcctgatgctgtatagaaagatctgccaggacaagttcctcatcgaa
cacctgccagaactgctgcagttcctgttcgacgaatga

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