Crassostrea virginica (eastern oyster): 111111977
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Entry
111111977 CDS
T09197
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111111977
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cvn03310
]
111111977
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111111977
Nuclear receptors [BR:
cvn03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
111111977
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Spike_JR1
Motif
Other DBs
NCBI-GeneID:
111111977
NCBI-ProteinID:
XP_022304913
UniProt:
A0A8B8BNJ4
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Position
9:complement(42260759..42272248)
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AA seq
592 aa
AA seq
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MSEGKIISDEKQCLLDGGTTEEPDKSTVTNGVLGLAKHSGKNRRTETEESSMSNTAFGTE
KPIEKLKVKKQRRKRDKYLPNTAPLELPPCKICGKAASGIHYGINSCEACKGFFRRYLKR
NEPYRCTRGGNCVIGQSPTGYMCSGCRLQKCFSLGMSKEGIRQGRYTLQERTNAIIEMRK
RQDEQATQARAENSVRSATQLSPSDYHNRSSTVDVYSDSSILSGHHSASSSPSSSSQLLS
QSSAGSSNLTSGKIQPTCFSSDHPPLMSHIGNSPNLNQSQPIQESIQKSKVVTADWLAYE
SSMASLPASDTSDNLSQGEEDLGSFCSSMEKLMEGYNELKPFTKSLSDDEIHALLNDGFQ
NYSQKIQLFGSMDPLPANTYNEIFKVTDIDVDGRTKILALIRTELVTVIHEYVRFTHGIP
AFKKLLPGDQASLLKAARLEFFLLLGYRSLDPETGMMVSYTGHVLPIKQFCAYAPADMST
SWLEVSRHIRHLQLLPKEHATMLGICLTFTDRCSLDDPGTVEKIQVSLLRLLESLLKERY
GKDGGKQLSKIMDVFVKLRGLNEEFLMLYRKICQDKFLIEHLPELLQFLFDE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaggaaagataattagtgatgaaaagcagtgtttattggatggaggcacaaca
gaagaaccggataaatctactgtcactaacggagtattgggtcttgcaaagcattctggg
aaaaaccgaagaacagagactgaagaatcttctatgagcaacacagccttcggaacagag
aaacccattgagaaactgaaagtcaagaaacagcggaggaagcgagataaatatttgccc
aatacagcaccgctcgagctgcccccgtgcaagatttgcgggaaggctgcgtctggcatc
cattacggcattaactcttgtgaagcttgcaagggatttttccgccgctacttaaagagg
aatgagccttaccgctgcaccaggggaggtaactgtgtgattgggcagtcccccacaggg
tacatgtgttcaggctgccgactacagaagtgtttcagtctcggcatgtctaaggaaggt
attcgtcagggacgatacacactccaggagaggactaatgccatcattgaaatgaggaaa
agacaggatgaacaagccacgcaggcaagggcagagaactccgtaaggagtgccacacag
ctctctccttctgattatcacaatcgatcctcaactgtggacgtttattccgactcatcg
attttatctggtcatcacagcgcttcatcatctccatcctcatcgtcacaattattatct
cagtcatcagcagggtcatctaatttaacatcagggaaaatccaaccaacctgtttttca
tccgaccatccgccacttatgtctcatataggcaactctcccaatcttaaccagtcacaa
ccaatccaggaatccatccagaaatccaaagtcgtaacagctgattggttggcctatgaa
agctctatggctagtctaccagcgtcggatacatcggataatttgtcacaaggtgaagag
gatctgggatccttttgttcctctatggagaaactcatggaaggctataatgaactgaaa
ccattcaccaaaagcttgtcggatgatgaaatccatgccttgttgaatgatggatttcaa
aattacagtcaaaagatacaattgtttggcagcatggacccactacccgcaaacacctac
aacgaaatcttcaaggtcacagacattgacgtggacggacggacaaagatcctggccttg
atcagaacggagcttgtcaccgtgattcatgagtacgtgaggtttactcacggaattccc
gccttcaagaaactgctgcctggagatcaagcctcattactaaaagctgccagactggaa
ttcttcctgctgctggggtatcgctccctggacccggagacggggatgatggtgtcatac
accggccacgtccttcccatcaagcagttctgtgcctacgcccccgctgacatgtcgacg
tcttggcttgaggtgtcacgacacatacgtcatctacagctcctcccaaaagaacatgcc
accatgttggggatttgtctgacgttcacagatcggtgttccctggacgaccctgggacg
gtggagaagatccaggtctccctgctccgactcctggaatccctcctgaaagaacggtac
ggaaaagatggcgggaaacagctgtcaaagattatggacgtgttcgtcaaactgcggggc
cttaacgaggagttcctgatgctgtatagaaagatctgccaggacaagttcctcatcgaa
cacctgccagaactgctgcagttcctgttcgacgaatga
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