Crassostrea virginica (eastern oyster): 111112032
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Entry
111112032 CDS
T09197
Name
(RefSeq) zinc finger BED domain-containing protein 1-like isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111112032
04121 Ubiquitin system [BR:
cvn04121
]
111112032
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
111112032
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
111112032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
hAT-like_RNase-H
BBS2_CtH
Motif
Other DBs
NCBI-GeneID:
111112032
NCBI-ProteinID:
XP_022305034
UniProt:
A0A8B8BQ93
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All DBs
Position
9:complement(51852438..51855063)
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AA seq
646 aa
AA seq
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MTRMASKKSKCWNYFCNEKNRQAKCNLCSAVVATSGGTTNLIFHLNRHHNISLRSETTVT
TRASGDVAQQPTEPKCEPGVKTNPWTLSASQRKLPLSRTNEITTAVLQYIIHDLRPFSTI
ESPVFRKMLSTLEPRYQPPNRTRLSEELIPALYESIKSKLYAELQSSEAVSLTCDGWTSR
ATQSFLTVTCHFVNKNWELSSKILQTDHFEGSHTGQKIGFELKSVMTDWGISDKVGVITV
DNASNMTVAVEVSGVDLKLGCFAHTLNLASNKALNIPSLDKILGKVRSVVTYFHKSNIST
EILKEKQVALQMPKHKLIIDCKTRWNSTYQMLQRFLEQRPAILATLLDDRVKRADKTKVV
SGLSDSDIQICEDFVSNMDVMLTATLVLCEEKSPTAGLVLPLLYKLTEHFKPKATDSTFV
KSLKNAVGSDLITRYTDPNLRYFLEEASALDPRTKNKACVDEETWDRIEDKMTVLDVTGV
GITVKSEKTESGEIPHTSSAVVESTPLPALPVLDEDINADEKFSCQISKSPPAKKTALET
LFDEEIVITGQEPALSARENAKRELQLYKEKKQATMKENPLLWWKTNYLLFPRLSKLAVR
YCCVQATSVASERVFSTTGDIVSATRACLKTENVNALVFLKKNMQF
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgacacgaatggcgtcaaaaaaatcgaagtgctggaattacttttgcaatgaaaagaac
cgacaggcaaaatgcaatctgtgttcagcggtggtggcgacgtcagggggcactacaaat
ctgatatttcatttaaacagacatcataacatttcgttacgcagcgagacgactgtcaca
actcgtgcctctggagatgtcgcccaacaacccactgaaccaaaatgtgagcctggggtg
aaaaccaacccatggacgctttcagcttctcagcgcaaattgccattgtccagaacaaat
gaaatcacaacagccgtattgcaatatattattcatgatctccggcccttctctactatt
gagagtcctgtgtttaggaagatgctttcaacacttgagcctcgttatcagcctcccaat
cgaaccagactaagtgaagagttaattcctgccctgtatgaaagcataaaaagcaagtta
tatgctgaactacaaagcagtgaagcagtatcccttacatgcgacggctggacatccagg
gcaacccagtcctttctaacagttacatgtcattttgttaataaaaactgggaattaagt
tcaaaaattctacaaacagatcattttgaaggttcacacacaggtcagaaaataggattt
gaactcaaaagtgtgatgacagactggggtatttctgacaaagttggagtgattacagtg
gataatgccagtaatatgacagttgcagttgaagtatctggtgttgatctcaaacttggt
tgttttgctcacacccttaacctggcatctaacaaggctcttaatataccctcgcttgac
aaaattcttggtaaagtacgttcagttgttacctactttcacaaaagcaatatttccaca
gaaattcttaaagaaaagcaggttgcccttcagatgccaaaacacaagttgataattgat
tgcaaaacaaggtggaactcaacttatcaaatgttgcaaagatttttagagcaaagacca
gcaattctagctactcttctggatgacagggtaaaacgagcagataaaaccaaggtagtt
agtggcttgagtgactctgacattcaaatttgtgaggattttgtgtccaacatggatgta
atgcttacagccactcttgtcttatgtgaagagaagtctcctacggctggtcttgtgctt
ccacttctctacaagctaacagaacatttcaaaccaaaggctactgactctacatttgtt
aaatccttgaaaaatgctgtaggttctgacctaattacaaggtacacagatccaaacttg
agatattttctggaagaggctagtgcattagatccaagaacaaagaataaggcctgtgtt
gatgaggaaacatgggacaggattgaggacaaaatgactgttcttgatgtcacaggagta
ggaataacagttaaatctgaaaaaactgaaagtggtgaaattcctcacacatcttctgct
gtagtagagtccacaccgcttcctgctttgcctgtgttggatgaggacataaatgcagat
gaaaagttttcttgtcagatttccaaatctccacctgcaaaaaaaacagcccttgagact
ttgtttgatgaggaaattgttataacaggacaggaacctgcactctctgccagggaaaat
gccaaacgggagctgcagctctacaaagaaaagaaacaagcaacaatgaaagaaaaccca
ctgctttggtggaagaccaattatctcctgtttccacgcttatccaaactagcagtcaga
tattgctgtgtgcaagctacatcagtagcatcagaaagagttttcagcacaactggtgac
atagtatctgccacacgtgcatgcctgaaaacagaaaacgttaatgctcttgtgtttcta
aagaaaaacatgcagttttaa
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