Crassostrea virginica (eastern oyster): 111112138
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Entry
111112138 CDS
T09197
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvn04054
]
111112138
Pattern recognition receptors [BR:
cvn04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111112138
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR_2
TIR
LRR_4
LRR_1
LRR_14
LRR_9
Motif
Other DBs
NCBI-GeneID:
111112138
NCBI-ProteinID:
XP_022305208
UniProt:
A0A8B8BQS1
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Position
9:101349832..101356947
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AA seq
768 aa
AA seq
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MLYIIQALVIGSVFLRIEAFNCSSNEKCHCVDFEGKYFANCNGLGLRSAPSFSVDVIGIS
LVNNDISEFPTSLPVGISYLDVSKNSLRGIRQNSLANYKFLRNLSVSENELKSIELGSLR
KAGHLIHLDLSLNQELTIEVLVNISHDLKNSTSIRVLNLEYLQCTFGTSFIVKQYHIADL
RHTLLEELNLASNRINSFEFGVFSMLPKTIKYLNVANNVLSYGYYLAEFGSLQNLVTLNI
SYQAFFHQVWVQNFLIGCNDTRDPCNSVKTDVERNITENSDTGEVIGQFSSSLQRLKNIT
IYFPPKMEVLYFHDNMYKLELQDFTLKSVDGPKLTHFHLQNNIIYSLTGPITGLSSVVHA
DLSNNFCSYISPKFFNDFQNMSFLDLSHNALGEIIENDVNGNIFRNLFKLKYLNLTRNRI
VRLPDPIFCNLVHLKQLNLSYNSLSEFTIPINHMKELRWLDLSNNQLSFLDQSTRDTLDT
LSSDKEIYVNLNANRLLCNCEHMDFVKWMRQSRNVIFVNSNEYTCSYMNSSRVSFSQIDR
LLQQMEKRCASYTLTIVLMTSLVIVILTATFSRILYRYRWKLRYMYYVAREKYRDNVQGS
DVTGGESSYYFDAFVSYADKDRGFVIDLVKSLEKEHNLKLCIHHRDFIPGTGIADNITNA
IHYSRRTVCIMTSPFLESYWCMFELNMARMEAIYSREGENVLFLVVLEKNAMAKLPFSFI
DLVESKSYLEFPENEDADESSAFRSKLGATLKSHDCEFRSLVTSSEQE
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgctgtatattatccaagcgcttgtcattgggtctgttttccttaggattgaggcattt
aactgttcctcaaacgaaaagtgccattgtgttgactttgaaggaaaatatttcgccaat
tgtaacggtctcggcctgagatcagcaccatcatttagtgttgacgtcataggaatcagt
ctcgtgaacaacgatatttcagaatttcctacgtcacttcctgtgggcatcagttacctg
gatgtatctaaaaactcgctgcgaggaattcgccaaaactcactggctaattataagttc
ttgcgtaatttaagcgtgtcagaaaacgaactcaaatcgatcgaattgggatcactcaga
aaagctggacatttaattcacttggatttgtctctcaatcaagagctaacaatagaagtc
ttggtgaatatttcacatgatttgaaaaactcaacttcaattcgagtgctgaatttggag
tatctgcaatgcacatttgggacaagcttcattgtcaagcaatatcatattgcagatttg
agacacacgctcctagaagagttgaatttggcgtccaatcgcatcaatagctttgagttt
ggtgtcttctcaatgttacccaaaactatcaaatatctgaatgtagccaataatgtgctg
agttacggctattatctggccgagtttgggtctttacagaatctcgtaaccctgaatata
agttatcaggccttcttccatcaagtttgggtgcaaaattttctcattggttgcaatgat
acgcgtgatccatgcaattctgtgaaaacagatgtagaacgcaacatcactgaaaattca
gacacaggagaggtaatagggcaattttcttcttctttacaaaggctaaagaatatcaca
atttattttccgcctaagatggaggtgctgtatttccatgacaacatgtacaagttggag
cttcaagatttcacactcaaatcagtggatgggccaaaactgactcatttccatctacaa
aataatattatctacagtttaacgggccctatcactggtttaagcagtgtagttcatgct
gatttatctaacaacttctgcagttatatatctcccaaattcttcaatgattttcaaaac
atgtcatttttagatctctcccataacgctttgggagaaattatcgaaaacgatgtcaat
ggaaacatttttcgcaatctgtttaagctaaaatatctaaatctgacgaggaatcgaatt
gttcgcttaccagatcccattttttgtaaccttgttcatttaaaacaactcaaccttagc
tataactctttaagtgagtttacgattcctataaatcacatgaaagaactccgttggttg
gacctctccaataaccagttatcgttcctggatcagtcgacacgtgacactctagataca
ttatcaagtgacaaagaaatttacgtgaacttgaacgccaacagattactttgtaactgt
gaacacatggactttgttaaatggatgagacaatcgagaaacgtaatttttgtcaattct
aacgagtatacgtgttcttatatgaactcttctcgagtaagtttttcgcaaatagatcgt
ttacttcaacagatggaaaaaagatgcgcctcatacacgttaacaatagttttgatgacg
tcactagtcatcgtcatcttgactgcaacattcagccgaattctctatagatataggtgg
aaactaaggtatatgtactatgtagcgagggaaaaataccgagacaatgtccagggttct
gacgtcacaggaggtgaaagttcatattattttgatgctttcgtctcctacgctgataaa
gatagagggtttgtgatcgatttagtgaaatctctggagaaagaacacaacttaaaactg
tgtatacaccaccgcgattttatccctgggacaggaattgcagacaatatcaccaatgcc
attcattatagcagacgaactgtgtgtatcatgacgtcaccttttctggaatcttattgg
tgcatgtttgaactcaatatggcgcgcatggaagccatttattctcgagagggcgaaaac
gttctgtttttggtcgtactagagaaaaatgccatggccaaactacctttctctttcata
gaccttgtcgaaagcaagtcatacttagagtttcctgaaaatgaggatgccgatgaatcg
agcgcctttcgttcaaaactgggagccaccctgaaatctcatgactgtgaatttagatcg
ctagtgacttcgagtgaacaggagtga
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