Crassostrea virginica (eastern oyster): 111112159
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Entry
111112159 CDS
T09197
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvn04054
]
111112159
Pattern recognition receptors [BR:
cvn04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111112159
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR_2
TIR
LRR_4
LRR_14
DUF3796
LRR_9
Motif
Other DBs
NCBI-GeneID:
111112159
NCBI-ProteinID:
XP_022305237
UniProt:
A0A8B8BPH0
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Position
9:101588516..101596384
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AA seq
768 aa
AA seq
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MLFIAQALVVGSVFLTIQASNCSSNEKCECVDFEGKYFANCNGLGLRSAPSFSDDVIGIS
LVNNDISEFPTSLPVNISYLDVSKNSLREIRRNSLANYTFLRNLSVSENELKSIELGSLR
KAGHLIHLDLSLNQELTIEVLVNISHDLKNSTSIRVLNLEYLQCTFGTSFIVKKYHIADL
RHTLLEELNLASNRINSFELGVFSMLPKTIKYLNVANNVLSYGYYLAEFGSLQNLVTLNI
SYQAFFHQVWVQNFLIRCNDTRDPCNFVKTDVLSNFTESPNTGEVIGQFSSSLQRPKNIT
IYIPPKMKVLYFHDNMYKLELQDFTLKSVDGPKLTHFHLQNNIIYSLTGPITGLSSVVHA
DLSNNFCSYISPKFFNDFQNMSFLDLSHNALGEIIENDVNGNIFRNLFKLKYLNLTRNRI
VRLPDPIFRNLVHLKQLNLSYNSLSEFTIPINHMKELGWLDLSNNQLSFLDQSTRDTLDT
LSRGKQIYVNLKANRLLCNCEHMDFVKWMRQSRNVNFVNFNEYTCSYMNSSRVSFSQIDR
LLQQMEKRCASYTFTIVFMTSLIIVILTATFSRILYRYRWKLRYMYYVAREKYRDNVQGS
DVTGGESSYYFDAFVSYADKDRGFVIDLVKSLEKEHNLKLCIHHRDFIPGTGIADNITNA
IHYSRRTVCVMTSPFLESYWCMFELNMARMEAIYSREGENVLFLVVLEKNAMAKLPFSFI
DLVESKSYLEFPENEDADESSAFRSKLGATLKSHDCEFRSLVSSSGHE
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttatcgcacaagcgctggttgttggatctgttttcctcaccatacaagcatct
aactgctcctcaaacgagaagtgcgaatgtgttgactttgaaggaaaatatttcgccaat
tgtaacggtctcggcctgagatcagcaccatcatttagcgatgacgtaataggaatcagt
ctcgtgaacaacgatatttcagaatttcctacgtcacttcctgtaaacatcagctatctg
gatgtatctaaaaactcgctgcgagaaattcgtcgaaactcactggctaattatacgttc
ttgcgtaatttaagcgtgtcagaaaacgaactcaaatcgatcgaattgggatcactcaga
aaagctggacatttaattcacttggatttgtctctcaatcaggagctaacaatagaagtc
ttggtgaatatttcacatgatttgaaaaactcaacttcaattcgtgtgcttaatttggag
tatctgcaatgcacatttgggacaagcttcattgtcaagaaatatcatattgcagatctg
agacacacgctcttagaggagttgaatttggcgtccaatcgcatcaatagcttcgagctt
ggtgtcttctcaatgttacccaaaactatcaaatatctgaatgtagccaataatgtgctg
agttacggctattatctggccgagtttgggtctttacagaatctcgtcaccctgaacata
agttatcaggccttcttccatcaagtttgggtgcaaaattttctcattcgttgcaatgat
acgcgtgatccatgcaattttgtgaaaacagatgtactaagcaatttcactgaaagtcca
aacacaggagaggtaatagggcagttttcttcttctttacaaaggccaaagaatatcacc
atctacattccgcctaagatgaaagttttgtatttccatgataacatgtacaagttggag
cttcaggatttcacactcaaatctgtggatgggccaaaactgacacatttccatctacaa
aataatataatctacagtttaacgggccctatcactggtttaagcagtgtagttcatgct
gatttatctaacaacttctgcagttatatatctcccaaatttttcaatgattttcaaaac
atgtcatttctagatctctcccataacgctttgggagaaattatcgaaaacgatgtcaat
ggaaacatttttcgcaatctgtttaagctaaaatatctaaatctgacgaggaatcgaatt
gttcgcttaccagatcccatttttcgtaaccttgttcatttaaaacaactcaaccttagc
tataactctttaagtgagtttacgattcctataaatcacatgaaagaactcggttggttg
gacctctccaataaccagctatcgttcctggatcagtcgacacgtgacactctagataca
ttatcacgtggcaaacaaatttacgtgaacctgaaagccaacagattactttgtaactgt
gaacacatggactttgttaagtggatgagacaatcgagaaacgtaaattttgttaatttt
aacgagtatacctgttcttatatgaactcttctcgagtaagtttttcgcaaatagatcgt
ttacttcaacagatggaaaaaagatgcgcctcatacacgtttacaatagtttttatgacg
tcactaatcatcgtcatcttgactgcaacattcagcagaattctctatagatataggtgg
aaactaaggtatatgtactatgtagcgagagaaaaataccgagacaatgtccagggttct
gacgtcacaggaggtgaaagttcatattattttgatgctttcgtctcctacgccgataaa
gatagagggtttgtgatcgatttagtgaaatctctggagaaagaacacaacttaaaactg
tgtatacaccaccgcgattttatccctgggacagggattgcagacaatatcaccaatgcc
attcattatagcagacgaactgtgtgtgtcatgacgtcaccttttctggaatcttattgg
tgcatgtttgaactcaatatggcgcgcatggaagccatttattctcgtgagggcgaaaac
gttctgtttttggtcgtactagaaaaaaatgcgatggccaaactacctttctctttcata
gaccttgtcgaaagcaagtcatatttagagtttcctgaaaatgaggatgccgatgaatcg
agcgcttttcgttcaaaacttggagccaccctgaaatctcatgactgtgaatttagatcg
ctagtgagttcgagtggacatgagtga
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