Crassostrea virginica (eastern oyster): 111112733
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Entry
111112733 CDS
T09197
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K-like isoform X1
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111112733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvn03041
]
111112733
Spliceosome [BR:
cvn03041
]
Common components
Common spliceosomal components
hnRNP proteins
111112733
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
MOEP19
KH_Vigilin
KH_N4BP1_2nd
Motif
Other DBs
NCBI-GeneID:
111112733
NCBI-ProteinID:
XP_022306177
UniProt:
A0A8B8BSB0
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Position
9:complement(51971675..51990822)
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AA seq
498 aa
AA seq
DB search
MEDDMGIKRPLDDDYEEEDDDRKRRRGDGPKVELRFLLASKNAGAIIGKGGSNIKRLRQD
YKASVTVPDSTSPERVLTIGANLGTALECVLDIIPKLEDYKNYKNDDFDCEMRLLVHQSQ
AGCIIGRAGFKIKELRERTGAQIKVYSQCCPESTERVVAIGGKPKIVVDCIETIHDLLQT
APPKGPNQPYDPLYWDEFMVPDYGGYSASEGGRGKGGPRGAPPGGRMGGGPMGMRGGVGG
GGRGMRGGAGGGGDFRRGGGGGMMRSGGGGGGRGGGGFGSRGGGGGGGGFGSGGGGFGGN
RQGGNRQGRGGGGSFGGGPMGGPMGGFGRGGSFGGSSGGGSGGGGGGGGGGGGFGSSGGS
GNSFGGSSGGGMGSSGGYGGDYDNFGGSDSYDDGYENFGGMGQNFSQDNSGGVGQMFGNE
GNLPSTQVTIPKDLAGAIIGKGGARIQEIRRQSNAQIVIDEGLPGSNDRIITITGTHEQI
QSAQFLLQSSVKRYSGKY
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgacatgggaataaagcgtcctttggatgatgattatgaggaggaagatgac
gatcgtaagaggagacggggagatggaccaaaggtggaactcagattcctattggccagc
aagaatgcgggtgctatcattgggaaaggcggcagcaatatcaaacgcctgagacaggat
tacaaagccagtgtaacagtgcccgactcgacaagtcccgaacgagtccttaccattgga
gccaacctgggaacagcacttgaatgtgtacttgatatcattccaaaattggaagactac
aagaattacaaaaatgatgattttgactgtgagatgcggttactggtacaccaaagtcaa
gctggatgtattatagggagggctggattcaaaatcaaggaactccgtgagagaacagga
gcacaaatcaaagtatattcccaatgttgtcctgagtccacagagagagtggtcgccata
ggaggaaagccaaagattgtggtggattgtatagaaaccattcatgacctactacagaca
gcaccacccaaaggtccaaaccagccatatgaccccctgtactgggacgagttcatggtc
cctgattacggtggttacagtgcctcagagggaggacggggtaaaggaggacccagagga
gccccaccggggggcaggatgggaggaggacccatgggcatgagagggggcgtaggtggc
ggtggcagaggtatgcgaggtggagcaggcggcggaggtgatttccgccgcggtggtggt
ggaggtatgatgagatctggcggcggtggaggaggacgtgggggtggaggattcggaagc
cgcgggggtggaggcggtggaggtggttttggaagcggaggtggaggattcggagggaat
cgtcaaggaggaaaccgtcagggaaggggtggaggaggcagctttggcggagggccgatg
ggaggacccatgggaggattcggcagaggtggcagttttggcggtagcagtggaggcggc
agtggtggtggtggaggaggaggaggcggaggaggaggcttcggaagcagcgggggcagt
ggaaacagctttgggggtagcagtggaggaggaatgggaagcagtggaggatatggtggt
gattatgacaattttggaggaagcgacagctatgatgatggctatgaaaactttggagga
atgggacaaaatttctcacaggataattctggtggtgtgggtcagatgtttggaaacgaa
ggaaatttaccctcaacccaggtcaccattccaaaggaccttgcaggagctataatagga
aagggtggtgcccgtatccaagaaatacgccgacagtccaacgcccagatagtcattgat
gaggggctgccggggtctaatgaccgaatcatcactatcacaggaacccacgaacagata
caaagtgcccaatttcttttacaaagcagtgttaaaagatactctgggaagtactaa
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