Crassostrea virginica (eastern oyster): 111112736
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Entry
111112736 CDS
T09197
Name
(RefSeq) integrin alpha-4-like
KO
K06483
integrin alpha 4
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04512
ECM-receptor interaction
cvn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111112736
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111112736
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111112736
04515 Cell adhesion molecules [BR:
cvn04515
]
111112736
04090 CD molecules [BR:
cvn04090
]
111112736
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111112736
Exosomal proteins of other cancer cells
111112736
Cell adhesion molecules [BR:
cvn04515
]
Integrins
Integrin alpha subunits
111112736
CD molecules [BR:
cvn04090
]
Proteins
111112736
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FG-GAP
Integrin_A_Ig_1
FG-GAP_3
Integrin_A_Ig_2
Motif
Other DBs
NCBI-GeneID:
111112736
NCBI-ProteinID:
XP_022306192
UniProt:
A0A8B8BS85
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Position
9:70881023..70914527
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AA seq
1053 aa
AA seq
DB search
MGGETWRRVFCSVIARWGTFRIWMLTLVLCEFCWSFNIDVTRPLIFHGKASTHFGAAVEL
LNNTDGKWVLVGAPLDTQSSATGYIRTGNVYMCPIHLGRNFTDVTDCAEIDTGSSKVVSD
DSRLGASLMVLQTSTVICAPGYQNPLKNNDTSGSCVYFENDKPSIISQLLIRIPSPDTSY
SFSWSLYGFSITAGMNATFPYTIGGPNSGSQAGGLATFTPSRRGLVSRRVQGTDSVQPGA
YFGYSLDNGIFDRNKFYYVSGRPGFANKNGNIGNVEILEFFEDEKKTTKKLIEGFQLGGG
FGHSVCVADVNGDSYDDVLIGAPLEYINQTNKNIIVDSGVVYIYIGTGSPDIIQETPFEI
RGMKKHMARFGTAIVNVGDISSDGITDIAVGAPFEDDHQGAVYIYNGCQTIPKNWLFSQR
ITSKDLGMGMSALGFYISKSHVDIDDNLYGDLAVSGFKRDQVVILRTRPVANVTVDILTT
PESIPINSTGLECNDGSDYPCVTLNIRFFVSGKGLQNGVYLNYSLYSDIFTEGENRFLLR
PNNSLPNILEPSVESQIIKLMPDENTFVNVSVTLKTVDWRFFNSLEDPVTIRLTFTLADL
TERDEVPPMLHKDVITNYAKTLEINRNCTYNPCLPHHVAYLSPVDSNMTLQQNQELSAHM
SLTNTGDPVERTEFYVETFPKMDFSRITEGFNDLKCDMVSLGILYCEMRPVRFYAHQKYD
FVLNFFIDADAVVKRKLDHVKMEVLFNSTASKANTFVMISHFNLQSYVRVVGGSSYSELI
LASDTGTTNKYSVSFDVHNDGPSPLGANLKIAVVTNKGSSDIVKGVSVTKGECSAQDVDI
KLLDEPENIKSQTLVDEEEGKQPTEIRCGLPTFSCTYLTCDLGYIKTTEYESVEFSMDIN
SGVLSSILKTLGEERGYFVTLGDVQLYDNDIPAFVNVTEKGEVTLRVSVGTAGLNSSDIL
WYSIGGSAGGLLFFIAIALILWRCGFFNRKRRGEIDRAKRQSMMKQRQSNMMSSFVNKEL
NKRPVSSLNGDDKSQIFRQSAKKDYPDLDIQDR
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgggaggggagacttggcgtcgtgtgttttgttctgtgatcgcccgctggggaaccttc
aggatctggatgttaacacttgtactctgcgaattctgctggagttttaacatcgatgtt
acacgacctttaatctttcatggaaaagctagcacacattttggagctgcggtagagtta
ttgaataatacagatgggaaatgggttctcgtgggtgccccattggacacacagtcctct
gccactggttacatcagaaccggaaacgtgtacatgtgtccgatacacctgggaaggaat
ttcactgacgtcacagactgcgctgaaatagacaccggaagcagtaaagtagtttctgat
gactcaagactaggagcaagtttaatggtgttacaaacatccactgtcatatgcgcccct
ggataccaaaacccgttaaaaaataatgacacatcgggctcgtgtgtttactttgaaaat
gacaagccttccatcatctctcagctactgatcagaatcccgagcccggacaccagttat
tctttttcatggtccctttatggattctctattactgctggaatgaatgcaacttttcct
tacacgattggaggaccgaatagtggatcacaagctggaggactagccacctttactcca
tcccgacgtggactggtgagtcgccgagtccaaggaacagattctgtacaaccaggagct
tactttggttactcattggacaatggaatatttgacagaaataaattttactacgtttct
ggtcgcccgggttttgcaaataaaaatggaaatattggaaacgtagaaatactagaattt
tttgaagatgaaaagaaaactaccaaaaaactaatagagggttttcagcttggtggtgga
tttggacattctgtttgtgtcgcggacgtcaatggagacagttatgatgatgttttgatt
ggtgcccctttagagtatatcaatcaaacaaataagaacataatagtggacagtggtgtt
gtatatatctacatcggaacaggatctcctgacattattcaagaaactccatttgagatc
agaggaatgaaaaaacatatggccagatttggaactgccatcgtcaatgttggagatatt
tccagtgatggaataacagatatcgcggtaggagccccctttgaagacgaccaccaagga
gcagtgtatatctacaacggctgtcaaactatacctaaaaactggctattttcacagaga
ataacctcaaaggacctaggcatggggatgtctgctcttgggttttatatatcaaaatct
cacgtagatatcgacgacaacttatacggagacctggcggtctcaggattcaaaagggac
caggtggtgatacttcggacacgtccagtggctaacgtgacggtggatatactgacgacc
ccagaaagcatacccatcaactccacgggattagaatgcaacgacggatcggattatccc
tgtgtaacactgaatatacggttttttgtgtctggaaagggattacaaaatggcgtgtat
ttaaactacagtttgtacagtgacatatttactgagggcgagaacaggttcctactacgg
ccaaataatagtcttccgaacattttggaaccatcagtagagtcccagattattaagtta
atgccggacgagaataccttcgtcaatgtgtctgtaactttaaaaacagtagattggaga
tttttcaattctctagaagaccctgtcacaataaggttgactttcacattggctgactta
acagagagagatgaggttcctccaatgcttcacaaagatgtcatcactaattatgcaaag
acgctggaaatcaaccggaactgtacctataacccttgtttaccacaccacgttgcttat
ttgagtccagtcgatagcaacatgacattacaacagaatcaagaactttcggctcacatg
tcgcttacaaacactggtgatcctgtagaaagaacagaattttatgtggaaacatttcca
aagatggatttctctagaatcaccgagggtttcaatgaccttaagtgtgacatggtttcc
cttggtatcttgtattgtgaaatgcgccctgtcagattctatgctcaccagaagtacgac
tttgttttgaatttcttcatcgatgccgatgcagttgtgaaaaggaaattagatcacgtt
aaaatggaagttttattcaattccacagctagcaaggccaacacatttgtcatgattagt
cattttaatctccagtcatatgtgagagttgtaggtggttcatcatattcagagctcatc
cttgcttctgataccgggactactaataaatactccgtgtcatttgacgttcataacgat
ggcccgagccctttaggagcgaatctgaagatagcagttgtgacaaataaaggaagctcg
gacatagttaagggagttagtgttactaaaggagaatgttccgcccaagacgtggatatt
aagctgttggatgaaccagaaaacataaaatcccaaacacttgtggatgaagaagaagga
aaacaaccaacagaaatcagatgcggtttaccaacctttagctgcacatacttaacctgt
gatctcgggtacatcaaaacaactgagtatgaaagtgtagaattttcaatggatattaac
tctggtgtcctctccagcattcttaagacactaggtgaggagagaggatactttgttact
ttaggcgatgttcaactatacgacaacgatattccagcattcgtcaatgtcactgagaaa
ggagaagtaacgcttcgggtgtccgtaggcacagcgggtctcaactcgtcggatattttg
tggtacagtataggcggcagcgctggaggattgctcttttttatcgccatagcactgatc
ttatggaggtgtgggtttttcaaccgaaaacgacgaggagaaattgatcgagctaaaaga
cagtccatgatgaaacaaagacaaagtaatatgatgtcttcctttgtgaacaaagaactc
aataaacgtcccgtgtcctcattgaatggcgatgacaaatcacaaatcttcagacaaagt
gctaagaaagactacccagatttggacatccaggacagatag
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