KEGG   Crassostrea virginica (eastern oyster): 111112793
Entry
111112793         CDS       T09197                                 
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
cvn  Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cvn03036]
    111112793
   03400 DNA repair and recombination proteins [BR:cvn03400]
    111112793
Chromosome and associated proteins [BR:cvn03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    111112793
DNA repair and recombination proteins [BR:cvn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     111112793
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML eIF2A WD40_RFWD3 NBCH_WD40 Beta-prop_Vps41 WDR90_beta-prop_4th B-prop_COPA_B_2nd Beta-prop_HPS5 Beta-prop_DCAF12 CHORD Lycopene_cycl
Other DBs
NCBI-GeneID: 111112793
NCBI-ProteinID: XP_022306341
UniProt: A0A8B8BTU6
LinkDB
Position
1:complement(46209130..46213730)
AA seq 334 aa
MAKMQELVTLSGHQDRVWCVAWNPTGSLLASCGGDKTIRIWGKEGDNWVCKSILAEGHQR
TIRSVGWSPCGNYLASASFDATTNIWSRKEGEFECIASLEGHENEVKAVSWAPTGLLLAT
CSRDKSVWIWEVTEDEEFECASVISSHTQDVKYVVWHPTREMLASCSYDNTIKLFKEEID
DWTCCNTLESHTSTVWKISFDQTGHRMVSCSDDKTLKIWQEYLPGNPEGIDTTGKESAWK
CVCTLSGYHDRVIYDVDWSRSNGLIVSACGDDCIRIFKEEEVSDKNQPSFSLVYTQNRAH
SQDVNSVAWNPKEHGLLASGSDDGDVKLWKVVLD
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggcaaaaatgcaagaattagtgacgctttctggtcaccaggatcgagtatggtgtgta
gcctggaatccaactggcagtttgctggcttcttgtggtggagacaaaactattcgcatt
tggggaaaagaaggagacaactgggtttgcaaaagtatccttgcggagggccaccaaaga
acgattcgtagtgtgggctggtccccctgtggtaactatttagccagtgccagcttcgat
gccactacaaacatctggagcagaaaagagggagagtttgagtgcattgcttccctggaa
ggccatgagaatgaggtcaaagctgtctcctgggctcccactggtctgctactggctaca
tgcagtcgagacaaaagtgtatggatctgggaagtcactgaagatgaggaatttgaatgt
gcaagtgtcatctcaagtcacacacaggatgtcaaatatgtggtttggcatccaaccaga
gaaatgcttgcatcttgtagttatgacaacacaataaaacttttcaaagaggagatcgat
gattggacatgctgtaacactctggaatcccatacttctactgtgtggaaaatcagtttt
gaccagactggtcacaggatggtgtcctgtagtgatgataaaacactgaaaatatggcag
gaatatttaccaggaaatccagagggaatagacacaaccgggaaagagtccgcctggaaa
tgtgtgtgtaccctctcaggctatcacgaccgagtcatctacgatgtggactggagtcgc
agtaacggattaatagtgtcagcttgtggcgatgactgtatcaggatattcaaagaagaa
gaggtatcggacaagaatcagccttctttcagcttggtttatactcagaaccgagcacac
tcacaggatgtgaattctgtagcttggaatcccaaagaacatggactactggcctcgggc
agtgatgatggggatgttaaactgtggaaagtggtgctcgattaa

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