KEGG   Crassostrea virginica (eastern oyster): 111112925
Entry
111112925         CDS       T09197                                 
Name
(RefSeq) sorting nexin-4-like
  KO
K17919  sorting nexin-4
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111112925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvn04131]
    111112925
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cvn04990]
    111112925
Membrane trafficking [BR:cvn04131]
 SNARE
  SNARE associated proteins
   Others
    111112925
 Protein recycling
  Rab GTPases and associated proteins
   Rab4 associated proteins
    111112925
 Autophagy
  Cytoplasm to vacuolar targeting (CVT) pathway
   Other Cvt associated proteins
    111112925
Domain-containing proteins not elsewhere classified [BR:cvn04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   111112925
SSDB
Motif
Pfam: PX Vps5 FAM92 YceG_bac DUF5798 Bacillus_HBL HlyD_2 V_ATPase_I FapA REST_helical Syntaxin_2 UFL1 Tropomyosin GrpE Med4
Other DBs
NCBI-GeneID: 111112925
NCBI-ProteinID: XP_022306523
UniProt: A0A8B8BT61
LinkDB
Position
1:complement(32442550..32450480)
AA seq 433 aa
MADDDSIPKYSPEGLSNDSVEEDPFENARKAGKKNLLQWMEIAVAEPEKRVVTSMKVQDT
FIVYLVETRITDKNIKYNGDGTSSLWRRYSEFELLQNYLSITYPYVVVPPLPEKKASYIW
QNSPTDKFDAEFIERRRAALEIFMLRVAAHPILSQDRIFIGFMQQEDGWKESVYLTDFQS
KAESRLKALSASFRLQNPDRQYDELKNYCTELESNISNLLKIRARMADKLYGIHKIHGNY
GRVFNEWSGIEKEMAEPLQSASHYMNVFAQSVDGILEEEEQYADQLKEYLAFADSLRSVC
RKYECLQYDVERAEDNLSYKKGQKEMLEQGKTGGTFSLSGMKTKLFGSDTPEQRDQKLKQ
LDEQIKHTEEEVQNTSQELQNFIDASMRDIDRFKRQKVKDLKEIFTNYAVMQIKQCKKGI
AIWTSAKDCYTKM
NT seq 1302 nt   +upstreamnt  +downstreamnt
atggctgacgacgattcaataccaaaatattctccagaaggtttatccaatgattctgtg
gaagaggatccatttgaaaatgcacgaaaagcaggcaagaaaaatttgcttcagtggatg
gaaattgcggtggctgaacctgaaaagagagtcgtgacatcaatgaaagtccaggatacg
tttattgtgtatctggtggaaacaagaattactgataagaacatcaagtacaatggagat
ggcacttcatctctgtggagacgttacagtgagtttgagctgttacagaattacctgtcc
attacctacccctatgttgtggtcccacctctacctgagaaaaaggcctcctacatttgg
cagaatagtcccaccgacaaatttgatgcagagttcatcgagaggcgacgagcagccctt
gaaatttttatgctaagagtggctgctcaccctattctctcccaggacagaatcttcatt
ggatttatgcaacaggaggatggatggaaggaatcagtctacctgaccgacttccagagt
aaggctgaatctagactcaaagccctgagtgcatccttcagacttcaaaatccagacaga
caatatgacgagctgaagaactactgtaccgagttagaaagtaacatatccaatctgctc
aaaatcagggcgagaatggcggataaactttatggaattcacaaaatccatggcaactat
gggcgtgtgtttaacgagtggagtgggatagagaaagaaatggcagaacctctacagagc
gcttcccactacatgaatgttttcgctcagagcgtcgacgggattttggaggaggaggag
cagtatgcggaccagttgaaggaatacctggcttttgccgattctctaaggtcagtatgc
aggaagtatgagtgtctgcaatacgatgttgaacgtgcagaggacaacctctcatacaaa
aagggccaaaaggaaatgttggaacaaggaaagaccgggggcactttttcgttaagtgga
atgaagacaaagttatttggcagtgacacgcccgaacagcgggaccagaaactgaaacag
ctggacgaacagataaagcatacagaggaggaggttcagaacacctcacaggagttacaa
aattttattgatgcttcaatgcgggatattgacagattcaagaggcaaaaagtcaaggat
ttgaaagagattttcacaaattatgctgtaatgcaaattaagcagtgcaaaaagggtatt
gctatatggaccagtgctaaagactgttacaccaagatgtga

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