Crassostrea virginica (eastern oyster): 111112925
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Entry
111112925 CDS
T09197
Name
(RefSeq) sorting nexin-4-like
KO
K17919
sorting nexin-4
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111112925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111112925
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvn04990
]
111112925
Membrane trafficking [BR:
cvn04131
]
SNARE
SNARE associated proteins
Others
111112925
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
111112925
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
111112925
Domain-containing proteins not elsewhere classified [BR:
cvn04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
111112925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
FAM92
YceG_bac
DUF5798
Bacillus_HBL
HlyD_2
V_ATPase_I
FapA
REST_helical
Syntaxin_2
UFL1
Tropomyosin
GrpE
Med4
Motif
Other DBs
NCBI-GeneID:
111112925
NCBI-ProteinID:
XP_022306523
UniProt:
A0A8B8BT61
LinkDB
All DBs
Position
1:complement(32442550..32450480)
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AA seq
433 aa
AA seq
DB search
MADDDSIPKYSPEGLSNDSVEEDPFENARKAGKKNLLQWMEIAVAEPEKRVVTSMKVQDT
FIVYLVETRITDKNIKYNGDGTSSLWRRYSEFELLQNYLSITYPYVVVPPLPEKKASYIW
QNSPTDKFDAEFIERRRAALEIFMLRVAAHPILSQDRIFIGFMQQEDGWKESVYLTDFQS
KAESRLKALSASFRLQNPDRQYDELKNYCTELESNISNLLKIRARMADKLYGIHKIHGNY
GRVFNEWSGIEKEMAEPLQSASHYMNVFAQSVDGILEEEEQYADQLKEYLAFADSLRSVC
RKYECLQYDVERAEDNLSYKKGQKEMLEQGKTGGTFSLSGMKTKLFGSDTPEQRDQKLKQ
LDEQIKHTEEEVQNTSQELQNFIDASMRDIDRFKRQKVKDLKEIFTNYAVMQIKQCKKGI
AIWTSAKDCYTKM
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgacgattcaataccaaaatattctccagaaggtttatccaatgattctgtg
gaagaggatccatttgaaaatgcacgaaaagcaggcaagaaaaatttgcttcagtggatg
gaaattgcggtggctgaacctgaaaagagagtcgtgacatcaatgaaagtccaggatacg
tttattgtgtatctggtggaaacaagaattactgataagaacatcaagtacaatggagat
ggcacttcatctctgtggagacgttacagtgagtttgagctgttacagaattacctgtcc
attacctacccctatgttgtggtcccacctctacctgagaaaaaggcctcctacatttgg
cagaatagtcccaccgacaaatttgatgcagagttcatcgagaggcgacgagcagccctt
gaaatttttatgctaagagtggctgctcaccctattctctcccaggacagaatcttcatt
ggatttatgcaacaggaggatggatggaaggaatcagtctacctgaccgacttccagagt
aaggctgaatctagactcaaagccctgagtgcatccttcagacttcaaaatccagacaga
caatatgacgagctgaagaactactgtaccgagttagaaagtaacatatccaatctgctc
aaaatcagggcgagaatggcggataaactttatggaattcacaaaatccatggcaactat
gggcgtgtgtttaacgagtggagtgggatagagaaagaaatggcagaacctctacagagc
gcttcccactacatgaatgttttcgctcagagcgtcgacgggattttggaggaggaggag
cagtatgcggaccagttgaaggaatacctggcttttgccgattctctaaggtcagtatgc
aggaagtatgagtgtctgcaatacgatgttgaacgtgcagaggacaacctctcatacaaa
aagggccaaaaggaaatgttggaacaaggaaagaccgggggcactttttcgttaagtgga
atgaagacaaagttatttggcagtgacacgcccgaacagcgggaccagaaactgaaacag
ctggacgaacagataaagcatacagaggaggaggttcagaacacctcacaggagttacaa
aattttattgatgcttcaatgcgggatattgacagattcaagaggcaaaaagtcaaggat
ttgaaagagattttcacaaattatgctgtaatgcaaattaagcagtgcaaaaagggtatt
gctatatggaccagtgctaaagactgttacaccaagatgtga
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