Crassostrea virginica (eastern oyster): 111112952
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Entry
111112952 CDS
T09197
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03266
Virion - Herpesvirus
cvn04081
Hormone signaling
cvn04145
Phagosome
cvn04148
Efferocytosis
cvn04512
ECM-receptor interaction
cvn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
111112952
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
111112952
04512 ECM-receptor interaction
111112952
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111112952
04148 Efferocytosis
111112952
09142 Cell motility
04820 Cytoskeleton in muscle cells
111112952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111112952
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111112952
04515 Cell adhesion molecules [BR:
cvn04515
]
111112952
04090 CD molecules [BR:
cvn04090
]
111112952
Membrane trafficking [BR:
cvn04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
111112952
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111112952
Cell adhesion molecules [BR:
cvn04515
]
Integrins
Integrin beta subunits
111112952
CD molecules [BR:
cvn04090
]
Proteins
111112952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
I-EGF_1
EGF_2
EGF_TEN
EGF_Teneurin
EGF_integrin
PFK
DUF3089
Motif
Other DBs
NCBI-GeneID:
111112952
NCBI-ProteinID:
XP_022306553
UniProt:
A0A8B8BT91
LinkDB
All DBs
Position
9:complement(21611320..21638685)
Genome browser
AA seq
797 aa
AA seq
DB search
MDKPIWLFLILVFVTVDHVQGQCAGARCGDCLILDNCAWCKDRNFTMTRCATEAQLRSTN
CTSIVLRKQHKIEYIKNSSFSDGGPAQESVQIRPQHVKIKLVPNLLLRTFKVSYKIARNF
PLDLYFLNDPSYTMRTLQSSLKALAKSIAIEIKNLTTDFRFGLGTSMDKVILPFTRTSPL
YINNPCYGTAITCEPAYSYRHRQDLTADISNFEKAVDAIQTTANFDKPEGLLDGLMQTMV
CGNRIGWREKARRMLLYASDINFHQAGDGRLAGILEPNDGLCHLDGTGKYTKAEVQDYPS
VGQIIQKAKENNINIIFVIGGNSSALTNEKVRQLFYDKLATLLPGGTEKASELSTDANNI
LQIVSENYRRLRETVKLVVNEDSKVLSVDMYSDCVTGGRTKDKINICSGLTTENPVDFYP
YIQSNFTTCPKERNLTFTIFPEGLEEKVRVDVEHVCDCDCQLEPEAEKNSSKCSFNGTFE
CGICNCNEGWIGDSCDCDNRGTEEEACGTPDGRICHSVGNCTCRKCECFEGYSGDKCECN
DKNCRNYNRLLCGGPDRGRCDCGKCVCNANYTGDACECLTLTTPCEDKNGTICSGNGNCV
CGRCVCNNGFRGALCDKCTSCPGICKQNKDCAECFAFGTGLYNSSVCQRECTNVRTAAIL
EPATPDGVEANETIKACITEDAEKCIINFNVYVGDADQQVVVKDIKRCPPGNPDPITIGL
SISGAIFLIGLLLLLIWKLLTMLYDSMEYSRFESEIQNPAWEKSENPIYKECVTTVQNPM
HETQFSKDNNSDEKLMT
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggataaaccgatatggttatttcttatactcgtttttgtaaccgttgatcatgtgcag
ggtcagtgcgcaggcgcccgatgtggagactgtttaattctggataattgtgcatggtgc
aaagataggaatttcacgatgactcgatgtgcgactgaagcccagctaagatctacaaac
tgtaccagtatagtgcttagaaagcaacacaagatagagtacattaagaacagcagtttt
tcggatggaggaccggctcaggaatcagtgcagattaggcctcaacatgtcaaaatcaag
cttgtgccaaacttattgctgagaaccttcaaagtgtcctacaaaattgcccgtaacttc
cctctggatttgtattttctaaatgacccttcctacaccatgagaacattacagagctcc
ttgaaggccttagccaagtctatcgccattgaaataaaaaatctgaccacggactttcgg
tttggattgggaacatcgatggataaagtcatactaccatttactcgaacatcaccttta
tatataaataacccatgctatggaacagccattacttgcgaacctgcgtactcgtaccga
catcgtcaagatttaacagctgatatcagcaattttgagaaagcagttgatgccattcaa
acaacagctaactttgacaaacctgagggcttgttggatggattgatgcagacaatggtt
tgtgggaatcggattggttggagggagaaagccagaaggatgttgttgtatgcatcagac
atcaatttccaccaggccggtgacggaaggctagcagggattttggagccaaatgatggt
ctttgtcatttggatggaactgggaaatacacaaaagctgaagttcaggactatccttct
gtcggtcaaataatacaaaaagctaaagaaaacaacattaatatcatttttgtcatcggt
ggaaattcttctgccttaaccaatgagaaagttcggcagctgttctatgataagttggcc
acattactgcccggggggacggaaaaagcctctgaactgagtactgacgccaacaacatt
ctacagatcgtcagcgaaaactataggcgtttgagagaaacagtgaaactagtggtcaac
gaggactctaaagtacttagtgtggacatgtactcggactgtgtgacaggagggaggaca
aaggacaaaataaacatctgctctggattaacaactgagaacccggtggacttttatcct
tacatccagtccaattttaccacttgtccgaaagaaagaaacttgactttcaccatattc
ccagagggattagaggaaaaagttcgtgtggatgtggaacacgtgtgtgattgcgactgt
cagctggaaccggaagcggagaaaaacagctctaaatgcagctttaacggaacgtttgaa
tgcgggatctgtaactgcaatgaaggatggataggtgactcgtgcgactgcgacaacagg
ggaacagaagaagaagcttgcggtactcccgacggaagaatctgtcacagtgtgggaaat
tgcacgtgccggaagtgtgaatgttttgaaggatatagcggtgataaatgcgaatgtaat
gacaaaaactgtcggaactacaacagacttctttgtggaggtccagatcgtgggcgatgt
gattgcggcaagtgtgtctgtaatgccaactacacgggggatgcatgtgaatgcctcacg
ctcaccactccatgtgaagacaaaaatgggacgatttgctctggaaatggtaactgtgta
tgcggtcgatgtgtgtgtaacaatggtttccgcggagcgctgtgtgataaatgcactagt
tgtccaggaatctgtaaacagaacaaagactgtgctgaatgttttgcctttggtactggt
ctgtacaattccagtgtctgtcagcgagaatgcactaatgtcaggactgccgcaatactg
gaaccagccactccggatggagtcgaggcaaacgaaacgataaaagcttgcatcactgaa
gacgctgagaaatgcattattaattttaatgtttatgtcggagatgcggaccaacaagtg
gtggttaaagacataaaacgttgtcctccaggaaatccagacccgataacgataggactt
agtatatccggggccatttttctgattgggcttctgcttttattgatttggaaactactg
acaatgttatatgacagtatggagtattccagatttgagtctgaaattcaaaatccagca
tgggaaaaatcggagaaccctatttacaaggaatgtgtcaccacggtacaaaacccaatg
catgaaacccagtttagcaaagacaacaacagtgatgaaaagcttatgacctag
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