KEGG   Crassostrea virginica (eastern oyster): 111112952
Entry
111112952         CDS       T09197                                 
Name
(RefSeq) integrin beta-3-like
  KO
K06493  integrin beta 3
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn03266  Virion - Herpesvirus
cvn04081  Hormone signaling
cvn04145  Phagosome
cvn04148  Efferocytosis
cvn04512  ECM-receptor interaction
cvn04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    111112952
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    111112952
   04512 ECM-receptor interaction
    111112952
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    111112952
   04148 Efferocytosis
    111112952
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111112952
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvn04131]
    111112952
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvn04147]
    111112952
   04515 Cell adhesion molecules [BR:cvn04515]
    111112952
   04090 CD molecules [BR:cvn04090]
    111112952
Membrane trafficking [BR:cvn04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    111112952
Exosome [BR:cvn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111112952
Cell adhesion molecules [BR:cvn04515]
 Integrins
  Integrin beta subunits
   111112952
CD molecules [BR:cvn04090]
 Proteins
  111112952
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt I-EGF_1 EGF_2 EGF_TEN EGF_Teneurin EGF_integrin PFK DUF3089
Other DBs
NCBI-GeneID: 111112952
NCBI-ProteinID: XP_022306553
UniProt: A0A8B8BT91
LinkDB
Position
9:complement(21611320..21638685)
AA seq 797 aa
MDKPIWLFLILVFVTVDHVQGQCAGARCGDCLILDNCAWCKDRNFTMTRCATEAQLRSTN
CTSIVLRKQHKIEYIKNSSFSDGGPAQESVQIRPQHVKIKLVPNLLLRTFKVSYKIARNF
PLDLYFLNDPSYTMRTLQSSLKALAKSIAIEIKNLTTDFRFGLGTSMDKVILPFTRTSPL
YINNPCYGTAITCEPAYSYRHRQDLTADISNFEKAVDAIQTTANFDKPEGLLDGLMQTMV
CGNRIGWREKARRMLLYASDINFHQAGDGRLAGILEPNDGLCHLDGTGKYTKAEVQDYPS
VGQIIQKAKENNINIIFVIGGNSSALTNEKVRQLFYDKLATLLPGGTEKASELSTDANNI
LQIVSENYRRLRETVKLVVNEDSKVLSVDMYSDCVTGGRTKDKINICSGLTTENPVDFYP
YIQSNFTTCPKERNLTFTIFPEGLEEKVRVDVEHVCDCDCQLEPEAEKNSSKCSFNGTFE
CGICNCNEGWIGDSCDCDNRGTEEEACGTPDGRICHSVGNCTCRKCECFEGYSGDKCECN
DKNCRNYNRLLCGGPDRGRCDCGKCVCNANYTGDACECLTLTTPCEDKNGTICSGNGNCV
CGRCVCNNGFRGALCDKCTSCPGICKQNKDCAECFAFGTGLYNSSVCQRECTNVRTAAIL
EPATPDGVEANETIKACITEDAEKCIINFNVYVGDADQQVVVKDIKRCPPGNPDPITIGL
SISGAIFLIGLLLLLIWKLLTMLYDSMEYSRFESEIQNPAWEKSENPIYKECVTTVQNPM
HETQFSKDNNSDEKLMT
NT seq 2394 nt   +upstreamnt  +downstreamnt
atggataaaccgatatggttatttcttatactcgtttttgtaaccgttgatcatgtgcag
ggtcagtgcgcaggcgcccgatgtggagactgtttaattctggataattgtgcatggtgc
aaagataggaatttcacgatgactcgatgtgcgactgaagcccagctaagatctacaaac
tgtaccagtatagtgcttagaaagcaacacaagatagagtacattaagaacagcagtttt
tcggatggaggaccggctcaggaatcagtgcagattaggcctcaacatgtcaaaatcaag
cttgtgccaaacttattgctgagaaccttcaaagtgtcctacaaaattgcccgtaacttc
cctctggatttgtattttctaaatgacccttcctacaccatgagaacattacagagctcc
ttgaaggccttagccaagtctatcgccattgaaataaaaaatctgaccacggactttcgg
tttggattgggaacatcgatggataaagtcatactaccatttactcgaacatcaccttta
tatataaataacccatgctatggaacagccattacttgcgaacctgcgtactcgtaccga
catcgtcaagatttaacagctgatatcagcaattttgagaaagcagttgatgccattcaa
acaacagctaactttgacaaacctgagggcttgttggatggattgatgcagacaatggtt
tgtgggaatcggattggttggagggagaaagccagaaggatgttgttgtatgcatcagac
atcaatttccaccaggccggtgacggaaggctagcagggattttggagccaaatgatggt
ctttgtcatttggatggaactgggaaatacacaaaagctgaagttcaggactatccttct
gtcggtcaaataatacaaaaagctaaagaaaacaacattaatatcatttttgtcatcggt
ggaaattcttctgccttaaccaatgagaaagttcggcagctgttctatgataagttggcc
acattactgcccggggggacggaaaaagcctctgaactgagtactgacgccaacaacatt
ctacagatcgtcagcgaaaactataggcgtttgagagaaacagtgaaactagtggtcaac
gaggactctaaagtacttagtgtggacatgtactcggactgtgtgacaggagggaggaca
aaggacaaaataaacatctgctctggattaacaactgagaacccggtggacttttatcct
tacatccagtccaattttaccacttgtccgaaagaaagaaacttgactttcaccatattc
ccagagggattagaggaaaaagttcgtgtggatgtggaacacgtgtgtgattgcgactgt
cagctggaaccggaagcggagaaaaacagctctaaatgcagctttaacggaacgtttgaa
tgcgggatctgtaactgcaatgaaggatggataggtgactcgtgcgactgcgacaacagg
ggaacagaagaagaagcttgcggtactcccgacggaagaatctgtcacagtgtgggaaat
tgcacgtgccggaagtgtgaatgttttgaaggatatagcggtgataaatgcgaatgtaat
gacaaaaactgtcggaactacaacagacttctttgtggaggtccagatcgtgggcgatgt
gattgcggcaagtgtgtctgtaatgccaactacacgggggatgcatgtgaatgcctcacg
ctcaccactccatgtgaagacaaaaatgggacgatttgctctggaaatggtaactgtgta
tgcggtcgatgtgtgtgtaacaatggtttccgcggagcgctgtgtgataaatgcactagt
tgtccaggaatctgtaaacagaacaaagactgtgctgaatgttttgcctttggtactggt
ctgtacaattccagtgtctgtcagcgagaatgcactaatgtcaggactgccgcaatactg
gaaccagccactccggatggagtcgaggcaaacgaaacgataaaagcttgcatcactgaa
gacgctgagaaatgcattattaattttaatgtttatgtcggagatgcggaccaacaagtg
gtggttaaagacataaaacgttgtcctccaggaaatccagacccgataacgataggactt
agtatatccggggccatttttctgattgggcttctgcttttattgatttggaaactactg
acaatgttatatgacagtatggagtattccagatttgagtctgaaattcaaaatccagca
tgggaaaaatcggagaaccctatttacaaggaatgtgtcaccacggtacaaaacccaatg
catgaaacccagtttagcaaagacaacaacagtgatgaaaagcttatgacctag

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