KEGG   Crassostrea virginica (eastern oyster): 111112953
Entry
111112953         CDS       T09197                                 
Name
(RefSeq) integrin beta-3-like
  KO
K06493  integrin beta 3
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn03266  Virion - Herpesvirus
cvn04081  Hormone signaling
cvn04145  Phagosome
cvn04148  Efferocytosis
cvn04512  ECM-receptor interaction
cvn04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    111112953
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    111112953
   04512 ECM-receptor interaction
    111112953
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    111112953
   04148 Efferocytosis
    111112953
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111112953
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvn04131]
    111112953
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvn04147]
    111112953
   04515 Cell adhesion molecules [BR:cvn04515]
    111112953
   04090 CD molecules [BR:cvn04090]
    111112953
Membrane trafficking [BR:cvn04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    111112953
Exosome [BR:cvn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111112953
Cell adhesion molecules [BR:cvn04515]
 Integrins
  Integrin beta subunits
   111112953
CD molecules [BR:cvn04090]
 Proteins
  111112953
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail EGF_2 I-EGF_1 EGF_TEN EGF_Teneurin EGF_integrin
Other DBs
NCBI-GeneID: 111112953
NCBI-ProteinID: XP_022306555
UniProt: A0A8B8BTC9
LinkDB
Position
9:complement(21568445..21585072)
AA seq 789 aa
MRIWIFFWLLASVGASVRAQTCAGDRCGDCLINEGCGWCKDPGYSFKRCNAESQLTTDGC
IDIVRRKSHTIQLIQNEEFSDGGPGLEPVQIKPQKIKVKLVPNRRLRDVEIFYKIAKNFP
LDLYFLNDPSYTMRFLASSLIDLANDIARDIATLTTDFQFGLGTSMDKVIEPFTRQDPTY
LTYPCGSNETKCDFPYSFIHRQSLTTNIAAFTAAVRSVNLTGNRDLVEGLFDGLMQVMVC
GEKIGWRNKARRMVIYATDINFHFAGDGRVAGILEPNDCQCHLDNSGKYTKAEIQDYPSV
GQIVQKARENNINIIFVIGGEDNQAIRTMYYDQLAAILPGGFKNASVLSANASNILQIVG
DSYRRLRETVKLVISKVPEELNVTIYSNCATGRTLDHTDTCTGLTIEKWTNFTLDVIYNL
TRCPTERIQSFTLYPEGLEERVEVEIEHLCDCDCQLEPEAEPNSTKCSGRGIRECGMCHC
QEGWSGEKCDCDQRGTEEEACGTVAGICSNAGNCTCRKCECFDGYSGEMCECNDRNCPSS
NGQLCGGINHGNCSCSKCICDPAYSGDACDCLISTDNCRNDNGTICSDNGVCECGRCQCN
AGFRGDTCDRCQNCAGTCKNNYNCVECVGFNQGEYNETVCNEKCRDVSVVPLFRNTAGEN
DTVATSCVLQDKFGCIIYFNIYDSGTSQLVQVRENKNCPPGPADPLKVGLGVSGAFFLVG
IVLLLIWKLLTMFYDSMEYKQFKSEITDPVWERSENPLYKECVTTVQNPMLETTDVPSGD
DVKDVKELN
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgcgtatatggatttttttctggctgctcgcttcagtgggagcaagcgttcgtgctcag
acatgcgctggagacaggtgtggggattgcttgattaacgagggttgtggctggtgcaaa
gacccgggatactcctttaagcgatgcaatgcggaaagccagctaacaacagatggatgt
attgatatcgtcagaaggaaaagtcacacgattcagttaattcagaacgaggaattttct
gatggtggaccaggattagaacctgtccaaatcaaaccacaaaaaataaaagtcaaactt
gttccaaatcggcgattgcgtgatgtggagattttctacaaaattgccaaaaacttccca
cttgatctctacttcctcaatgatccatcttacactatgagatttttagcatcaagcctg
atcgatctggccaatgacatagcaagagacattgccaccttgacaactgacttccaattt
ggacttggaacatctatggataaagtcatcgaaccgtttactcgacaggatcctacctat
ttaacatatccatgtgggagcaatgaaactaagtgtgattttccttattcctttatccat
cgacagtcattgaccacaaacatcgctgcatttactgcagctgttcgaagtgtaaatctt
accggaaatcgagaccttgtagaggggttgtttgatggacttatgcaagttatggtttgt
ggagaaaaaataggatggaggaacaaagctaggaggatggtaatctatgccacagacatc
aactttcactttgcaggagacggaagggttgcaggaattctagaaccgaacgactgtcaa
tgccatttagacaattcgggcaagtacacaaaggctgaaattcaggattatccttcggtt
ggtcaaattgtgcagaaggcacgagaaaacaacatcaacataatatttgtaattggagga
gaagacaatcaggccatacggacgatgtactatgaccaactggcagccatattaccagga
ggatttaaaaatgcctccgttttgtcggcgaatgcatccaatattttacaaatcgttgga
gatagttataggcgactaagagagacagtgaaattagtcatcagtaaagttcctgaggag
ctgaacgttacaatttactctaattgtgcaactgggagaaccctcgaccacacagacaca
tgtactggactcaccatagaaaaatggacaaatttcaccttggacgttatctataactta
acacgctgccccacggagaggattcaaagttttactctttatcccgagggccttgaggag
cgtgtagaagtagaaatcgagcacctgtgtgattgcgattgtcaacttgaaccagaagcg
gagcccaacagtaccaaatgttcaggtcgggggatccgcgagtgtgggatgtgtcactgt
caagaggggtggtccggggagaagtgtgattgtgaccagagagggaccgaggaggaagcc
tgtggcacagtggcaggaatctgcagcaatgctggtaattgtacatgccggaaatgtgaa
tgttttgacggatacagtggagaaatgtgtgaatgtaacgatagaaattgtccatcatca
aatggtcagctttgtggaggaattaatcatgggaattgttcgtgtagtaaatgcatttgt
gaccctgcatattcaggcgacgcctgtgattgccttatatcaactgacaattgcaggaac
gataatgggacaatctgctctgataacggcgtatgcgagtgcgggaggtgtcaatgtaat
gcagggtttcgtggagatacgtgtgaccgatgtcagaattgcgctgggacatgcaagaac
aattataactgtgtagagtgtgtgggtttcaaccaaggggaatacaacgaaaccgtttgt
aacgagaaatgcagggatgtttcagtagtgccattgttcaggaacacggctggtgaaaat
gatacagttgctacgtcatgtgtacttcaagataaattcggatgcatcatatacttcaat
atttatgactcagggacaagtcaactagttcaagttagagagaacaagaattgtccccct
gggcctgccgaccctctcaaagtgggacttggggtgtctggagcattcttcttggtgggg
atcgttttactattgatatggaaactactcaccatgttttatgattcaatggaatacaag
caattcaaatcggaaatcacagaccctgtctgggaaagatctgagaatccgttatacaag
gaatgcgtcaccacagtccaaaatccaatgctcgaaaccactgacgttcctagtggtgat
gacgtcaaggacgtgaaagaattaaactga

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