Crassostrea virginica (eastern oyster): 111112953
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Entry
111112953 CDS
T09197
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03266
Virion - Herpesvirus
cvn04081
Hormone signaling
cvn04145
Phagosome
cvn04148
Efferocytosis
cvn04512
ECM-receptor interaction
cvn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
111112953
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
111112953
04512 ECM-receptor interaction
111112953
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111112953
04148 Efferocytosis
111112953
09142 Cell motility
04820 Cytoskeleton in muscle cells
111112953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111112953
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111112953
04515 Cell adhesion molecules [BR:
cvn04515
]
111112953
04090 CD molecules [BR:
cvn04090
]
111112953
Membrane trafficking [BR:
cvn04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
111112953
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111112953
Cell adhesion molecules [BR:
cvn04515
]
Integrins
Integrin beta subunits
111112953
CD molecules [BR:
cvn04090
]
Proteins
111112953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_2
I-EGF_1
EGF_TEN
EGF_Teneurin
EGF_integrin
Motif
Other DBs
NCBI-GeneID:
111112953
NCBI-ProteinID:
XP_022306555
UniProt:
A0A8B8BTC9
LinkDB
All DBs
Position
9:complement(21568445..21585072)
Genome browser
AA seq
789 aa
AA seq
DB search
MRIWIFFWLLASVGASVRAQTCAGDRCGDCLINEGCGWCKDPGYSFKRCNAESQLTTDGC
IDIVRRKSHTIQLIQNEEFSDGGPGLEPVQIKPQKIKVKLVPNRRLRDVEIFYKIAKNFP
LDLYFLNDPSYTMRFLASSLIDLANDIARDIATLTTDFQFGLGTSMDKVIEPFTRQDPTY
LTYPCGSNETKCDFPYSFIHRQSLTTNIAAFTAAVRSVNLTGNRDLVEGLFDGLMQVMVC
GEKIGWRNKARRMVIYATDINFHFAGDGRVAGILEPNDCQCHLDNSGKYTKAEIQDYPSV
GQIVQKARENNINIIFVIGGEDNQAIRTMYYDQLAAILPGGFKNASVLSANASNILQIVG
DSYRRLRETVKLVISKVPEELNVTIYSNCATGRTLDHTDTCTGLTIEKWTNFTLDVIYNL
TRCPTERIQSFTLYPEGLEERVEVEIEHLCDCDCQLEPEAEPNSTKCSGRGIRECGMCHC
QEGWSGEKCDCDQRGTEEEACGTVAGICSNAGNCTCRKCECFDGYSGEMCECNDRNCPSS
NGQLCGGINHGNCSCSKCICDPAYSGDACDCLISTDNCRNDNGTICSDNGVCECGRCQCN
AGFRGDTCDRCQNCAGTCKNNYNCVECVGFNQGEYNETVCNEKCRDVSVVPLFRNTAGEN
DTVATSCVLQDKFGCIIYFNIYDSGTSQLVQVRENKNCPPGPADPLKVGLGVSGAFFLVG
IVLLLIWKLLTMFYDSMEYKQFKSEITDPVWERSENPLYKECVTTVQNPMLETTDVPSGD
DVKDVKELN
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatatggatttttttctggctgctcgcttcagtgggagcaagcgttcgtgctcag
acatgcgctggagacaggtgtggggattgcttgattaacgagggttgtggctggtgcaaa
gacccgggatactcctttaagcgatgcaatgcggaaagccagctaacaacagatggatgt
attgatatcgtcagaaggaaaagtcacacgattcagttaattcagaacgaggaattttct
gatggtggaccaggattagaacctgtccaaatcaaaccacaaaaaataaaagtcaaactt
gttccaaatcggcgattgcgtgatgtggagattttctacaaaattgccaaaaacttccca
cttgatctctacttcctcaatgatccatcttacactatgagatttttagcatcaagcctg
atcgatctggccaatgacatagcaagagacattgccaccttgacaactgacttccaattt
ggacttggaacatctatggataaagtcatcgaaccgtttactcgacaggatcctacctat
ttaacatatccatgtgggagcaatgaaactaagtgtgattttccttattcctttatccat
cgacagtcattgaccacaaacatcgctgcatttactgcagctgttcgaagtgtaaatctt
accggaaatcgagaccttgtagaggggttgtttgatggacttatgcaagttatggtttgt
ggagaaaaaataggatggaggaacaaagctaggaggatggtaatctatgccacagacatc
aactttcactttgcaggagacggaagggttgcaggaattctagaaccgaacgactgtcaa
tgccatttagacaattcgggcaagtacacaaaggctgaaattcaggattatccttcggtt
ggtcaaattgtgcagaaggcacgagaaaacaacatcaacataatatttgtaattggagga
gaagacaatcaggccatacggacgatgtactatgaccaactggcagccatattaccagga
ggatttaaaaatgcctccgttttgtcggcgaatgcatccaatattttacaaatcgttgga
gatagttataggcgactaagagagacagtgaaattagtcatcagtaaagttcctgaggag
ctgaacgttacaatttactctaattgtgcaactgggagaaccctcgaccacacagacaca
tgtactggactcaccatagaaaaatggacaaatttcaccttggacgttatctataactta
acacgctgccccacggagaggattcaaagttttactctttatcccgagggccttgaggag
cgtgtagaagtagaaatcgagcacctgtgtgattgcgattgtcaacttgaaccagaagcg
gagcccaacagtaccaaatgttcaggtcgggggatccgcgagtgtgggatgtgtcactgt
caagaggggtggtccggggagaagtgtgattgtgaccagagagggaccgaggaggaagcc
tgtggcacagtggcaggaatctgcagcaatgctggtaattgtacatgccggaaatgtgaa
tgttttgacggatacagtggagaaatgtgtgaatgtaacgatagaaattgtccatcatca
aatggtcagctttgtggaggaattaatcatgggaattgttcgtgtagtaaatgcatttgt
gaccctgcatattcaggcgacgcctgtgattgccttatatcaactgacaattgcaggaac
gataatgggacaatctgctctgataacggcgtatgcgagtgcgggaggtgtcaatgtaat
gcagggtttcgtggagatacgtgtgaccgatgtcagaattgcgctgggacatgcaagaac
aattataactgtgtagagtgtgtgggtttcaaccaaggggaatacaacgaaaccgtttgt
aacgagaaatgcagggatgtttcagtagtgccattgttcaggaacacggctggtgaaaat
gatacagttgctacgtcatgtgtacttcaagataaattcggatgcatcatatacttcaat
atttatgactcagggacaagtcaactagttcaagttagagagaacaagaattgtccccct
gggcctgccgaccctctcaaagtgggacttggggtgtctggagcattcttcttggtgggg
atcgttttactattgatatggaaactactcaccatgttttatgattcaatggaatacaag
caattcaaatcggaaatcacagaccctgtctgggaaagatctgagaatccgttatacaag
gaatgcgtcaccacagtccaaaatccaatgctcgaaaccactgacgttcctagtggtgat
gacgtcaaggacgtgaaagaattaaactga
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