Crassostrea virginica (eastern oyster): 111112955
Help
Entry
111112955 CDS
T09197
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03266
Virion - Herpesvirus
cvn04081
Hormone signaling
cvn04145
Phagosome
cvn04148
Efferocytosis
cvn04512
ECM-receptor interaction
cvn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
111112955
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
111112955
04512 ECM-receptor interaction
111112955
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111112955
04148 Efferocytosis
111112955
09142 Cell motility
04820 Cytoskeleton in muscle cells
111112955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111112955
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111112955
04515 Cell adhesion molecules [BR:
cvn04515
]
111112955
04090 CD molecules [BR:
cvn04090
]
111112955
Membrane trafficking [BR:
cvn04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
111112955
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111112955
Cell adhesion molecules [BR:
cvn04515
]
Integrins
Integrin beta subunits
111112955
CD molecules [BR:
cvn04090
]
Proteins
111112955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
I-EGF_1
EGF_TEN
EGF_Teneurin
EGF_2
EGF_integrin
Motif
Other DBs
NCBI-GeneID:
111112955
NCBI-ProteinID:
XP_022306556
UniProt:
A0A8B8BUH7
LinkDB
All DBs
Position
9:complement(21590968..21605167)
Genome browser
AA seq
787 aa
AA seq
DB search
MRVWIFVWLLASVASVRAQTCSGERCGECLINEGCGWCKDPGYSLKRCKMESQLTTDGCI
DIVRRKSHTIQLIQNDDFSDGGPGLEPIQIKPQKIRVKLVPNRRLRDVEIFYKIAKNFPL
DLYFLNDPSYTMRFLASSLNSLANDIANDIATLTTDFQFGLGTSMDKVIEPFTNQNPTYL
KYPCGSSAVQCDFPYSFINRQSLTTNIAAFTAAVRNVNITGNQDAVEGLFDGLMQVMVCG
EKIGWRNKARRMVIYATDINFHYAGDGRVAGILEPNDCQCHLDNSGKYTKAEIQDYPSVG
QIVQKARENNINIIFVIGGTDNLAVRTMYYDQLAGILPGGFKNASVLSADASNILQIVGD
SYRRLRETVKLVISKVPEELNVAIYSNCATGRTLDLTDTCTGLTIENWTNFTLDIISNLT
SCPTERIQSFTLYPEGLEERVEVEIEHVCDCDCQLAPEAEPNSTKCSGRGTYECGMCNCQ
EGWSGEECECDQRGTEEEACGTVAGICSNAGNCTCRKCECFDGYSGEMCECNDRNCPSSN
GQLCGGINHGNCSCSKCNCDPAYSGDACDCLISTDNCRNDNGTICSDNGVCECGRCQCNA
GFRGDTCERCQNCVGTCKNNYNCVECVGFNQGIYNGTVCNEKCRDVQVVSLFTNTVDEND
TVVTSCVLEDKFGCIIYFNVYDSGSGQLVQVRADKNCPPEPADPLAVGLGVSGAFFLVGI
VLLLIWKLLTMLYDSMEYKQFESEITNPAWEKSDNPLYKECVTTIQNPMHETDIPSGDDI
KDVKELN
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtctggatttttgtctggttactcgcttcagtggcaagcgttcgtgctcagaca
tgcagtggagaaagatgtggggaatgcttgattaacgagggttgtggctggtgcaaagac
ccgggatactccttaaagcgatgcaaaatggaaagccagctaacgacagatggatgtatt
gatatcgtcagaaggaaaagtcacacgattcagttaattcagaacgacgatttttctgat
ggtggaccaggattagaacctatacaaatcaaaccacaaaaaataagagtcaaacttgtt
ccaaatcgacgattgcgtgatgtggagattttctacaaaattgccaaaaacttcccactt
gatctctacttcctcaatgatccatcttatactatgagatttttagcatcaagcctgaac
agtttggccaatgacatagcaaatgacattgccacattgacaactgacttccaatttgga
cttggaacatctatggataaagtcatcgaaccgtttactaaccagaatcctacttattta
aagtatccatgtgggagttctgcagttcagtgtgattttccttactcctttatcaatcga
cagtcattgaccacaaacatcgctgcttttactgcagctgttcgaaatgtaaatattact
ggaaaccaagatgctgtggagggattgtttgacggacttatgcaagtcatggtttgcggt
gaaaaaataggatggaggaacaaagccagaaggatggtgatctatgcaacagacatcaac
tttcactatgctggagacggaagggttgctggaattctagagccgaacgactgtcaatgc
catttagacaattcgggcaagtacacaaaggctgaaattcaggattatccttcggttggg
caaattgtgcagaaggcacgagaaaacaacatcaacataatatttgttattggaggaact
gacaacctggccgtacggacgatgtactatgaccaactggcaggaatattaccaggagga
tttaaaaatgcctctgttttgtccgcggatgcatccaatattttacaaatcgttggagat
agttataggcgactaagagagacggtaaaactagtcatcagtaaagttcctgaggagctg
aacgttgcaatttactctaattgtgcaactggtagaactcttgatctgacagacacatgt
actggacttaccatagaaaactggacaaattttaccttggacattatctctaacttaaca
agctgcccaacagagcggattcaaagttttactctttatcccgagggccttgaagagcgt
gttgaagtagaaatcgagcacgtatgtgattgcgattgtcaacttgcgccagaagcggag
cccaacagtaccaaatgttccggtcgcgggacctacgagtgtgggatgtgtaactgccag
gaggggtggtccggggaggagtgtgaatgtgaccagagagggaccgaggaggaggcctgt
ggcacagtggcaggaatctgcagcaatgctggtaattgtacatgccggaaatgtgaatgt
tttgacggatacagtggagaaatgtgtgaatgtaacgatagaaattgtccatcatcaaat
ggtcagctttgtggaggaattaaccatgggaattgttcgtgtagtaaatgcaattgtgac
cctgcatattcaggcgacgcctgtgattgccttatatcaactgacaattgcagaaacgat
aatgggacaatttgctctgataacggcgtatgcgagtgcgggaggtgtcaatgtaatgct
gggtttcgtggagatacgtgtgagcgttgccagaattgcgttgggacatgcaagaacaac
tataactgtgtagagtgtgtcggttttaatcaagggatctacaacggaactgtttgtaac
gagaaatgtagagatgttcaagtggtatcgttgttcacgaacacagttgatgaaaatgat
acagttgttacatcatgtgttcttgaagataaattcggatgtatcatatacttcaacgtt
tatgactcaggaagcggtcaactggttcaagtcagagcggacaaaaattgcccccctgaa
ccagctgaccccctcgcagtgggacttggggtgtctggagcattcttcttggtggggatc
gttttactattgatatggaaactactcaccatgttgtatgattcaatggaatacaagcaa
ttcgaatcggaaatcacaaaccctgcctgggaaaaatcagataatccattatacaaggaa
tgcgtcactactatccaaaatcctatgcatgaaaccgacatccctagtggtgatgacatc
aaggacgtgaaagaattaaactga
DBGET
integrated database retrieval system