Crassostrea virginica (eastern oyster): 111113299
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Entry
111113299 CDS
T09197
Name
(RefSeq) selenocysteine insertion sequence-binding protein 2-like isoform X1
KO
K19539
selenocysteine insertion sequence-binding protein 2
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111113299
03012 Translation factors [BR:
cvn03012
]
111113299
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111113299
Translation factors [BR:
cvn03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
111113299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
111113299
NCBI-ProteinID:
XP_022307155
EnsemblRapid:
LOC111113299
UniProt:
A0A8B8BV33
LinkDB
All DBs
Position
9:complement(18108658..18123849)
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AA seq
1233 aa
AA seq
DB search
MEQVTGLVSSVSYSLSPDAAVFIPRQFPGDGPLQVQQIPTYMTNCYPFVQLDAERQKNLN
QHGRISALLAGPHPRPSVPRLPRGFPGPGTRMPVPQTFNPSVPPPLENTWMMPPPSSVPP
LNFMKFPPPPEVTYPQDKDPKHKPSPRGHQRQGWSPRDENVKEGSRQGDTRGKRREVGGE
GKKWTQRSRNNSGKSNTSEGHREEARTNSQSKRRSRVKASDGRGGQDQPSLDHVTSAAVS
MTDNSVQTEFSDSFANQTLAQYPSPIYNPKLGKLGNRAGIGSSSEDSDSGYHSPLHRKNQ
VTNGTQPVGVIPDPVVSPSPSKNDYSRLVADQLKTEKSPPKERGGSKENTSAQQIFSYAF
IAQSKPVIESSVKKEEVKMEEESKKSEGKKTEGEESGNEGKRKRKRNRRKRRKKKDESTE
DAEMKAGEESKGVELHFQDEEEFPDLRVGQNRAGGTERHPSSISYSSIVSQPKTNTHNAI
WKQTEPSSSQELDMNDNNNSIRNSRRRKKKLELVQQAADEELAEISFEQQMLRELNLKPR
SKGQTSPSRGNPVLSSRSGQEKPAGTQPGILKVPPQNQSQGKKGKMREGILDLSAMIDAL
EKKKPEVNKVVEPKVVRKPEVKAKENKKPGSGHNMLDSSAPLKRGKERENPKPKKPSSLK
KVILKEREEKKKMRLLDDAESANNGVSLGIGVVSGNESDLSQDAHSSKGSVVDYTGTGTP
ASNDLSPISQTSPISMSPLSPGVSPQSSEVNSPIAGTIGKEVRMKIHSRRFREYCNQVLN
KDIDSCCTRLLQDLVRFQDRMYHKDPVKAKTKRRIVLGLREVTKHLKLKKIKLVIISPNL
EKIQSKGGLDDALNNILNLCNEQNIPFVFALGRRALGRACAKLVPVSVVGIFNYSGTEDN
FHSLMDLTEQARQAYKEMVNVIEREIRDYPTLGAAAAVPHIYAHMGHSRTPSGASVLSFA
SSLLSEPISENYPHSEPETDAAGYEIPRTKADAPPPISRGSIQAAYESQMRLIYPTLDVD
EGNEADTEEGVTKGHHHDDGSSDSDPSSEENTKTLPHIDSIHSSTYDLSTEILSQNSGRT
VDNCDAISTHSSRTLGDGSSTLLADPGERSKHGTPKSIESPSNTLQRGKVIDSERIQNWV
DQTKSRLEDLQYLQEHSDSSDDSNSSEEDTVDELNLSSGLSRNSGETKTPGAEDALQCSG
EDGKGEEVRVGPTETTNPEGHNQGEGQTSVTQS
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggtaactggccttgttagctctgtgagctattcgctgtccccggatgcagca
gtgtttatcccacgccagtttcccggggacggtcccttacaggtgcagcagattccgacc
tacatgacaaactgctatccctttgtacagttggatgctgaaaggcagaagaatctaaac
caacatggcaggatttctgccctcttggcaggacctcacccaaggcccagtgttccgagg
ctccccagggggtttccaggacctggaaccagaatgccagtgccccagacttttaatccc
agtgtcccccctcctctggaaaacacctggatgatgccacccccaagctcagtccctccc
ctcaacttcatgaagtttccccctcccccggaggtgacgtatccccaggataaggaccca
aagcacaagccttcccccaggggacaccagaggcagggctggtcccctcgggatgaaaat
gtgaaggagggaagtcggcagggggacacgagggggaaaaggcgggaagtggggggagag
gggaagaaatggacacagagaagccgtaacaactcggggaagagtaacacaagtgaaggt
catagagaggaagccagaaccaactcacagagcaagaggaggtcaagggtcaaggccagt
gatggcaggggaggtcaggatcagccatctttggatcatgtgacttctgctgcagtcagc
atgacagacaactctgttcagacagaattttctgacagttttgctaaccaaactcttgct
cagtacccaagtccaatatataaccccaaactcggtaagctcggtaacagggcggggatt
ggcagctcctctgaggactccgacagtggatatcacagtccactccacagaaagaatcaa
gtcaccaacggaactcagccagtgggtgtcatccctgacccagtggtcagtccttcgcca
tcgaaaaacgattattcaaggctagtggcagatcagctgaaaacggaaaagtctcctcca
aaagaacggggtggttccaaggagaatacgtccgctcaacagatattttcttatgcattt
atagctcagtcgaagcctgtgatagaatccagtgtgaaaaaggaggaggtgaagatggaa
gaagaaagcaagaaatctgagggcaagaaaacagagggtgaggagagtggaaatgagggc
aagcggaaacgaaaacggaatcggcggaaaaggcggaaaaagaaagatgaatcaactgag
gatgcagagatgaaagcaggggaggaatcaaagggggtggagcttcactttcaggatgag
gaggagtttccagacctgagggtggggcaaaacagagcaggggggacagagaggcacccc
tcctccatctcctacagctcaattgtgtctcagcccaagacaaacacacataatgcaatc
tggaaacagactgaaccatcttcaagccaagaattagatatgaatgacaataacaactcc
attcgaaactcccgtcgacgcaagaaaaagctggagctcgttcagcaagctgcagacgaa
gagctcgctgagatcagtttcgagcagcagatgctacgcgagctcaatctcaaaccaagg
tcaaaaggtcagacgtcgccgtctcgaggcaacccagtcctctcatcaagatcgggacag
gagaagccagctggcacccagccagggatcctgaaggtccccccacagaaccagtcccag
gggaaaaaggggaaaatgagggaggggatcctagatctaagtgccatgatagatgcactg
gagaaaaagaaaccagaggtcaataaagtagtggagcccaaggtcgttcgaaaaccagag
gtcaaggctaaagaaaacaagaagccgggctccggacacaacatgctggactcttccgcc
ccactaaagagggggaaggagcgagagaaccccaaacccaagaaacctagctccctgaaa
aaggtaattttaaaagaacgagaagagaagaagaagatgagactccttgatgacgcagaa
tctgcaaacaatggtgtgtctttgggaattggagtggtttcaggaaacgaaagtgactta
tcacaggatgcacacagctccaagggttcagtggtcgactacacaggcacggggacaccg
gccagtaatgacctctcccccataagtcagacctcacccatcagcatgagccccctctcc
ccgggggtcagtcctcagagttcagaggtcaacagtcctattgctggcaccataggcaag
gaggttcgcatgaagatacacagtcgaagattcagggagtactgtaaccaggtgttgaac
aaggacatagacagctgttgtacccggctcttacaagacctggtccgcttccaggaccgc
atgtaccacaaggacccggtcaaggccaagacaaaaaggaggattgtactaggactaagg
gaggtcactaaacacctgaaactgaagaaaatcaagcttgtcattatctcccctaatctg
gagaaaattcagtcgaaaggtggtctggatgatgctctcaacaacattcttaatctgtgt
aacgagcagaacattccgttcgtgtttgcccttgggaggcgggcattaggacgggcctgt
gccaaactggttcccgtcagtgtcgtggggatcttcaattacagcggaacagaggacaat
ttccacagtctgatggatctgactgaacaggccagacaggcttacaaggaaatggtcaac
gtgatcgagcgtgagatccgagattaccccaccctgggggcagcagcagccgtcccccac
atctatgcccacatgggtcactcccggaccccctctggagccagtgtcctcagcttcgcc
agtagtctgctatcggagccaatatccgaaaactacccccactccgaacccgagacggat
gctgccggatacgagattccacgaacaaaagcagacgccccacctccaatcagtcgtggt
tccattcaggcggcatatgaatcccagatgcggcttatttatccgacattggacgtggat
gaagggaatgaagcagacactgaggaaggggtcaccaaaggtcatcaccatgatgacgga
tcatcggatagtgatccatcatccgaggaaaacacaaagacattgcctcacatagactct
attcatagcagtacatatgatctcagtacggagatattgtctcagaactctgggcgaacg
gtggataactgtgacgccatttccactcactcgtctcgtacgctgggggatggcagttct
accctgttggccgacccaggcgaaaggtcaaaacatggaacgccaaaaagcatagagagt
cctagtaatacattacagaggggcaaggttatcgactcggaacggatccaaaactgggtg
gatcagacaaaatcccgtttggaagatctgcagtatctccaggagcattcggattcatcg
gatgattccaacagcagtgaggaggatacggtggatgaactaaatctgtcgtctggtctc
agtagaaatagtggtgagaccaagacccccggggcagaggacgccctgcagtgctccggt
gaggacggtaaaggagaggaagtgagggtcggtcccacagagacaacaaaccccgagggt
cacaaccagggtgaaggtcagacaagtgtgacccagtcctga
DBGET
integrated database retrieval system
