Crassostrea virginica (eastern oyster): 111113326
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Entry
111113326 CDS
T09197
Name
(RefSeq) integrin beta-1-A-like
KO
K05719
integrin beta 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04145
Phagosome
cvn04512
ECM-receptor interaction
cvn04820
Cytoskeleton in muscle cells
cvn05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
111113326
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111113326
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111113326
09142 Cell motility
04820 Cytoskeleton in muscle cells
111113326
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
111113326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111113326
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111113326
04515 Cell adhesion molecules [BR:
cvn04515
]
111113326
04090 CD molecules [BR:
cvn04090
]
111113326
Membrane trafficking [BR:
cvn04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
111113326
Exosome [BR:
cvn04147
]
Exosomal proteins
Proteins found in most exosomes
111113326
Cell adhesion molecules [BR:
cvn04515
]
Integrins
Integrin beta subunits
111113326
CD molecules [BR:
cvn04090
]
Proteins
111113326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
EGF_2
I-EGF_1
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
111113326
NCBI-ProteinID:
XP_022307224
UniProt:
A0A8B8BWI7
LinkDB
All DBs
Position
9:78856056..78874757
Genome browser
AA seq
800 aa
AA seq
DB search
MESMRSVLFLTTFLCSIHLWERVGSQDLRTDSIIPTQENPCLKEKTTTCGQCIAISTKCA
FCADPEYDTKNYPRCDLLTTHEKLINDKPRCQDIINPPSVLNKTKDIPLFDGDRDRNAEQ
IKPQQIDLELRPNDPQTFELEFRLAQNYPVDLYYLMDLSNSMKDDKENLANLGIKIAEEM
NTLSNGFKLGFGSFVDKPVMPYVSTAKNKINNPCQGCEKAYGFRNVLALNQNATFFKDKV
GRSMVSGNLDAPEGGFDAIMQALACESQIGWRDRSRRMLLFSTDSGFHYAGDGKLGGILK
QNDGLCHLAADGMYTESSNQDYPSISQVGMKAKDKNFNIIFAVTSEQKDIYDQLKPYIAG
SETGELASDSNNIVKLIRDSYLAITSKVELIVENSDNVEVKFQTRCKGNTVKDTNRCENL
SIGDLVKFNVTLEVKNCPPTGQEEKTLRIKPVGLYDTLTVKLKLKCQCDCESAKNIADNQ
NHAMCNFNGTYVCGMCMCNDPYYGDRCGCNRASENIDDKNKQCIQAGTTTLCNGRGECSC
GRCKCRERQEGTGQFYTGSYCECDDYGCPYYSGLICGGPSRGVCNCGHCVCKEGFKDDNC
GCKTDNSTCMYSGKLCNGRGECECGKCKCNPKYFGSHCQECDNCAEKQCSTHRDCALCKR
GDYRGLSKEDCHKQCVHTTAKEQITLKDDVINCEFVDDNGCFIYFAFSFGGNYKLKVEVQ
KNPVCPEKPNVLAIVLGVLAGLVVLGILVVLGVKFGIDYRDYRIYQAFLEEVKNAKWEEA
GNPIYKDPVNKYQNPTYGGN
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaatgcgttctgtcctgtttttaactacgtttttatgttcaatacatttgtgg
gagcgcgtgggttcgcaagatctacgaactgactctataataccaacacaggagaaccct
tgccttaaagaaaagactacaacttgtggacagtgtatcgctatttctactaaatgtgca
ttttgtgcagaccctgaatacgataccaaaaattatccccgctgtgatctgttgacaact
catgagaaactgattaacgacaaacccagatgtcaagatatcatcaatcctccatctgtc
ctgaacaaaacaaaggacattcctctgtttgatggagatcgagacagaaatgccgagcag
atcaagccccaacagattgacctcgagttacgccctaatgacccccagacttttgaactc
gagtttcgattggctcaaaattatccggtagacctatactatcttatggatctctcaaac
tctatgaaagatgacaaagaaaatctggccaatctgggaataaaaatcgctgaggaaatg
aacactctctcaaacggcttcaagctgggattcgggtcttttgtggataagccggttatg
ccttacgtgagcacagctaaaaacaaaattaacaatccatgccaaggatgtgaaaaagct
tatgggtttaggaatgtccttgcattaaatcaaaatgcaacatttttcaaagacaaagtg
ggtagatctatggtttctgggaatctggatgcgcctgagggtggtttcgatgccataatg
caggcccttgcttgtgagagtcagattggttggagggatcgatccagaagaatgctgctg
ttttctacggattctggattccattatgctggagatggaaaacttggcggcatcctcaaa
caaaacgacggtctctgtcacctagctgcagatggcatgtataccgagagctccaaccag
gactatccctctataagtcaagtcggtatgaaagcaaaggacaagaatttcaacatcatt
ttcgcggtcaccagcgaacaaaaggacatttacgaccagttaaagccatacatcgcggga
tcagaaactggagagttagcctctgattctaataacatcgtaaagttaatccgtgacagc
tacttggccatcacgtctaaagtggagctgattgtggagaactcggacaatgtggaggtc
aagttccagaccagatgtaaaggaaatactgtgaaggacacaaacagatgtgagaatctg
tccattggagacctggtgaagttcaatgtgaccttggaagtaaagaattgtccccccaca
ggccaggaggagaagaccctgaggatcaaacctgtgggtctgtacgacaccctgaccgtc
aagctcaagttaaagtgccagtgtgactgtgaatccgccaaaaatatagctgataatcag
aatcatgctatgtgtaactttaacggcacatatgtgtgtgggatgtgtatgtgtaacgac
ccttactacggagatagatgtggctgtaatagagcgtccgaaaacatcgacgacaaaaac
aaacaatgcattcaggccggcacaaccaccctgtgtaatggtcggggggagtgtagttgt
ggtaggtgtaagtgtcgggagagacaggagggtaccggtcagttctacaccggaagttac
tgcgagtgtgacgactatggatgtccctattactcaggactcatatgtggaggtccgagc
agaggggtatgtaattgtggccactgtgtgtgtaaagaaggatttaaagatgacaattgt
ggctgtaaaactgacaacagcacctgcatgtacagtgggaaattgtgcaatggcagaggt
gaatgcgagtgtggcaaatgcaaatgcaatcctaagtactttggatcacattgtcaagag
tgtgataactgcgcagagaaacagtgcagtactcatcgcgactgtgctttatgcaaaaga
ggtgattaccgagggttatcgaaggaagactgtcataagcagtgtgtccacaccacggca
aaagaacagatcacccttaaagatgatgttattaactgtgaatttgttgatgacaatggc
tgttttatctacttcgccttctccttcggtggtaattataaattgaaggtggaagtacag
aagaatccagtgtgccccgaaaagcccaatgtcctggccatcgtgttaggggtactagca
ggattagtagtccttggcattctcgtggttcttggcgtgaaatttggcatcgactatagg
gactaccgtatttatcaagcgtttttggaagaagttaaaaatgccaagtgggaggaggcc
ggaaatccaatctataaggatcctgttaacaagtaccagaaccctacgtatggtggaaat
tga
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integrated database retrieval system