KEGG   Crassostrea virginica (eastern oyster): 111113326
Entry
111113326         CDS       T09197                                 
Name
(RefSeq) integrin beta-1-A-like
  KO
K05719  integrin beta 1
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn04145  Phagosome
cvn04512  ECM-receptor interaction
cvn04820  Cytoskeleton in muscle cells
cvn05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    111113326
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    111113326
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    111113326
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111113326
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    111113326
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvn04131]
    111113326
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvn04147]
    111113326
   04515 Cell adhesion molecules [BR:cvn04515]
    111113326
   04090 CD molecules [BR:cvn04090]
    111113326
Membrane trafficking [BR:cvn04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    111113326
Exosome [BR:cvn04147]
 Exosomal proteins
  Proteins found in most exosomes
   111113326
Cell adhesion molecules [BR:cvn04515]
 Integrins
  Integrin beta subunits
   111113326
CD molecules [BR:cvn04090]
 Proteins
  111113326
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt EGF_integrin EGF_2 I-EGF_1 vWA_SIBA-E
Other DBs
NCBI-GeneID: 111113326
NCBI-ProteinID: XP_022307224
UniProt: A0A8B8BWI7
LinkDB
Position
9:78856056..78874757
AA seq 800 aa
MESMRSVLFLTTFLCSIHLWERVGSQDLRTDSIIPTQENPCLKEKTTTCGQCIAISTKCA
FCADPEYDTKNYPRCDLLTTHEKLINDKPRCQDIINPPSVLNKTKDIPLFDGDRDRNAEQ
IKPQQIDLELRPNDPQTFELEFRLAQNYPVDLYYLMDLSNSMKDDKENLANLGIKIAEEM
NTLSNGFKLGFGSFVDKPVMPYVSTAKNKINNPCQGCEKAYGFRNVLALNQNATFFKDKV
GRSMVSGNLDAPEGGFDAIMQALACESQIGWRDRSRRMLLFSTDSGFHYAGDGKLGGILK
QNDGLCHLAADGMYTESSNQDYPSISQVGMKAKDKNFNIIFAVTSEQKDIYDQLKPYIAG
SETGELASDSNNIVKLIRDSYLAITSKVELIVENSDNVEVKFQTRCKGNTVKDTNRCENL
SIGDLVKFNVTLEVKNCPPTGQEEKTLRIKPVGLYDTLTVKLKLKCQCDCESAKNIADNQ
NHAMCNFNGTYVCGMCMCNDPYYGDRCGCNRASENIDDKNKQCIQAGTTTLCNGRGECSC
GRCKCRERQEGTGQFYTGSYCECDDYGCPYYSGLICGGPSRGVCNCGHCVCKEGFKDDNC
GCKTDNSTCMYSGKLCNGRGECECGKCKCNPKYFGSHCQECDNCAEKQCSTHRDCALCKR
GDYRGLSKEDCHKQCVHTTAKEQITLKDDVINCEFVDDNGCFIYFAFSFGGNYKLKVEVQ
KNPVCPEKPNVLAIVLGVLAGLVVLGILVVLGVKFGIDYRDYRIYQAFLEEVKNAKWEEA
GNPIYKDPVNKYQNPTYGGN
NT seq 2403 nt   +upstreamnt  +downstreamnt
atggaatcaatgcgttctgtcctgtttttaactacgtttttatgttcaatacatttgtgg
gagcgcgtgggttcgcaagatctacgaactgactctataataccaacacaggagaaccct
tgccttaaagaaaagactacaacttgtggacagtgtatcgctatttctactaaatgtgca
ttttgtgcagaccctgaatacgataccaaaaattatccccgctgtgatctgttgacaact
catgagaaactgattaacgacaaacccagatgtcaagatatcatcaatcctccatctgtc
ctgaacaaaacaaaggacattcctctgtttgatggagatcgagacagaaatgccgagcag
atcaagccccaacagattgacctcgagttacgccctaatgacccccagacttttgaactc
gagtttcgattggctcaaaattatccggtagacctatactatcttatggatctctcaaac
tctatgaaagatgacaaagaaaatctggccaatctgggaataaaaatcgctgaggaaatg
aacactctctcaaacggcttcaagctgggattcgggtcttttgtggataagccggttatg
ccttacgtgagcacagctaaaaacaaaattaacaatccatgccaaggatgtgaaaaagct
tatgggtttaggaatgtccttgcattaaatcaaaatgcaacatttttcaaagacaaagtg
ggtagatctatggtttctgggaatctggatgcgcctgagggtggtttcgatgccataatg
caggcccttgcttgtgagagtcagattggttggagggatcgatccagaagaatgctgctg
ttttctacggattctggattccattatgctggagatggaaaacttggcggcatcctcaaa
caaaacgacggtctctgtcacctagctgcagatggcatgtataccgagagctccaaccag
gactatccctctataagtcaagtcggtatgaaagcaaaggacaagaatttcaacatcatt
ttcgcggtcaccagcgaacaaaaggacatttacgaccagttaaagccatacatcgcggga
tcagaaactggagagttagcctctgattctaataacatcgtaaagttaatccgtgacagc
tacttggccatcacgtctaaagtggagctgattgtggagaactcggacaatgtggaggtc
aagttccagaccagatgtaaaggaaatactgtgaaggacacaaacagatgtgagaatctg
tccattggagacctggtgaagttcaatgtgaccttggaagtaaagaattgtccccccaca
ggccaggaggagaagaccctgaggatcaaacctgtgggtctgtacgacaccctgaccgtc
aagctcaagttaaagtgccagtgtgactgtgaatccgccaaaaatatagctgataatcag
aatcatgctatgtgtaactttaacggcacatatgtgtgtgggatgtgtatgtgtaacgac
ccttactacggagatagatgtggctgtaatagagcgtccgaaaacatcgacgacaaaaac
aaacaatgcattcaggccggcacaaccaccctgtgtaatggtcggggggagtgtagttgt
ggtaggtgtaagtgtcgggagagacaggagggtaccggtcagttctacaccggaagttac
tgcgagtgtgacgactatggatgtccctattactcaggactcatatgtggaggtccgagc
agaggggtatgtaattgtggccactgtgtgtgtaaagaaggatttaaagatgacaattgt
ggctgtaaaactgacaacagcacctgcatgtacagtgggaaattgtgcaatggcagaggt
gaatgcgagtgtggcaaatgcaaatgcaatcctaagtactttggatcacattgtcaagag
tgtgataactgcgcagagaaacagtgcagtactcatcgcgactgtgctttatgcaaaaga
ggtgattaccgagggttatcgaaggaagactgtcataagcagtgtgtccacaccacggca
aaagaacagatcacccttaaagatgatgttattaactgtgaatttgttgatgacaatggc
tgttttatctacttcgccttctccttcggtggtaattataaattgaaggtggaagtacag
aagaatccagtgtgccccgaaaagcccaatgtcctggccatcgtgttaggggtactagca
ggattagtagtccttggcattctcgtggttcttggcgtgaaatttggcatcgactatagg
gactaccgtatttatcaagcgtttttggaagaagttaaaaatgccaagtgggaggaggcc
ggaaatccaatctataaggatcctgttaacaagtaccagaaccctacgtatggtggaaat
tga

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