Crassostrea virginica (eastern oyster): 111113368
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Entry
111113368 CDS
T09197
Name
(RefSeq) RISC-loading complex subunit tarbp2-like
KO
K24540
interferon-inducible double-stranded RNA-dependent protein kinase activator A
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvn03036
]
111113368
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Gene silencing
microRNA pathway
RISC loading complex
111113368
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
dsrm
Staufen_C
DSRM_2
DND1_DSRM
Dicer_dsRBD
E1_UFD
Alpha_TIF
Motif
Other DBs
NCBI-GeneID:
111113368
NCBI-ProteinID:
XP_022307308
UniProt:
A0A8B8BVC3
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Position
9:57328884..57343112
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AA seq
323 aa
AA seq
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MALIPPGKTPISFLQEISTKRGITPQYDLLANEGAVHEPVFIMRVTVGEVIATGKGTSKK
KAKHGAALAALQQVLGLGEGQTQEQLPMEEGQQSGNTLDGDVPGNPVGELQEFTQKKLIK
PPVYEFANEDGPPHNREFVCTVKLGKFTEKGSGRSKKTAKRSAASAMLAHIKNITQDGEE
ETKIEDSEEEDDIPLNASEIRSSYTTLKEGKVKLPIPSPQQNMEIQQFYQRIKNNYKVKV
NSRLSSAPATNYCQMLQEVSEVQRFEVSYLDIAEVSSKGQRQCLVQLSTLPIAVCHGTGQ
TVDEAHAHAAHNALQYLKLMTKT
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgattcctccaggcaagacccccatcagtttcctccaggagatcagcaccaaa
agggggataactcctcagtatgacttgctggccaatgaaggggctgtacatgaacccgtg
ttcataatgagggtgacggtcggagaggtgattgccacaggaaaaggaaccagcaagaag
aaggccaagcatggtgctgccctggcggccctgcagcaggttctggggctgggagagggt
cagacccaggaacagttgccgatggaggagggacaacagtcgggaaacaccctggacggg
gatgtccctgggaaccccgtgggggaactccaggagttcacacagaagaagcttattaaa
ccccctgtctatgagtttgctaacgaggacggtcccccacacaacagagagtttgtgtgt
actgtgaagctgggaaagttcacagaaaaagggtctggacgatccaagaagacagccaaa
cgctcggccgccagcgccatgttggcccacatcaagaacatcacacaggacggagaggag
gagacgaagattgaagactcggaggaggaagacgacattccactgaatgcgtctgagatc
cgttcctcctacaccaccctaaaagaaggcaaggtcaaactcccgatcccgagcccccag
cagaacatggagattcagcagttctaccagaggatcaagaacaactacaaggtcaaggtc
aacagccgtctgtcctccgcccccgccaccaactactgccagatgttacaggaggtcagc
gaggtgcagcgcttcgaggtcagctacctcgacatcgccgaagtcagctccaaaggacag
aggcagtgcctggtgcagctctccaccctccctatagctgtgtgtcacggcaccggacag
acggtcgacgaggctcacgcccacgcagcccacaatgcattgcagtatctaaaacttatg
acaaagacgtaa
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