Crassostrea virginica (eastern oyster): 111113404
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Entry
111113404 CDS
T09197
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04512
ECM-receptor interaction
cvn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111113404
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111113404
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvn04515
]
111113404
Cell adhesion molecules [BR:
cvn04515
]
Integrins
Integrin alpha subunits
111113404
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GFIT
Motif
Pfam:
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
111113404
NCBI-ProteinID:
XP_022307364
UniProt:
A0A8B8BWY5
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Position
9:67300259..67331930
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AA seq
1122 aa
AA seq
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MDIYWPCRFSSISFSSISFPFLWIVLWTSDILHTSGYNVDTEHPVVLSGKPGSYFGATAE
IVVNADKWILVGATKDNFTDLPDIPSPGNVYACKVDFYSESTCYELETLRTSERAANKSA
EVYEQRDQQLGATILVPEDPTKAIKICAPAWKNLRFIADEDCYQVLGNCFLLQDRNDLVN
SSKLSAFRILTDELEYYAMPLIGFSIADFKTPVFQTLYGAPNAGSASTGGIVGRKDSDTS
GTGTFKMVVERSDVIKETYISNSLLGYSTATGNLGPTLRFGFVMGAPGFSNKNGNIGAFS
VFNYAPTGPIQLKQIEGKQVGGGFGQTICLVDVNGDGFDEILVSAPNSFKQDISRNQIFP
DVGIVYVYYGTGDPSVLKDTPQVLEGTQVSFSRFGTAIVNIGDINKDGFNDVAIGAPYEN
NEGAVYIFNGKETKMDPVYSQKILGSQLQDGIQGFGFYISRTAKDLDDNQYNDFAVGAYK
SDRVLLLRSRNIITVHCNVTTSPSPIPLNASGTSCSGGDVNANPCFTASFCFNYTGEGID
NTEIDFMISLDTNETRARVEILRSEETGGGASDDSLPAGGAREGLTVENFIIFPNMTHCY
NVEFTVPTVDRIFFQSMERPIVLEVTYKVSNTSLPGKVRAILNRDITPIYYGEARIDTGC
KAEDGSCYSNLIVDVSFDKNLVLIGNDTVIQMKTTMRNLGEPSFNTSFLVHYPEEVLFNS
FKPSAVSEQVNCAQFNNTAIYCMLSDPFYQRMVVELDFLFEVFRNSFEKNTGFVSLPALE
IGVTAVTDNDTNPADNTVSRNVSLAAYTRVTLQVSTSSEQITASNQSVQFQNTYTLYNEG
PCVIETVDVVFRVPVRSIDKVFVKQNNVKVTGRNRKDSCKLIYFPGDILRTTTQLPLPGS
STFRYNISDINVIPANNLVSENENMRENSEYSQDISCDGSGQYLCATVQCAVNLVQPIES
DGRPFVIALDILLQDLPKLEKGKSYFSFITQGQVVPTTRSRASLVLMRNVSEQAYVSILL
PNSFIQDVEEIDLKIIILGSVGGFLLFLLLGVILWKCGFFKREKRKQVEDFKRKSRYSMR
KSRMASVRGQKAGGAGSVHAPMLGDQDIPKKFDEMDDHHFTT
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggatatttattggccttgtcggttctcgtcgatttcgttctcgtcgatttcgtttccg
ttcttatggattgtgctatggacatcggatatattacacacctccggttacaatgtcgat
acagaacatccagtggtattaagtgggaaaccaggctcatactttggagcaactgcggaa
attgttgtgaatgcagataaatggatattagttggcgccaccaaagacaacttcacagac
cttcccgacattcctagtcccggaaacgtgtacgcctgcaaggtagacttctactccgag
tcgacatgctacgagttggaaactctcagaacctcagaaagggccgctaataagtctgca
gaggtatacgaacagagagatcaacagctaggcgccaccattttggtcccggaagatcct
acaaaagccatcaagatatgtgctccagcatggaagaatttacgcttcatcgcggacgaa
gattgctaccaagtcttgggaaactgtttcctgctgcaggatcggaacgatctggtcaac
tcctccaagctcagcgcgtttcgtattctcacggacgaactggaatactatgcaatgccg
ctcatcggattctccattgcagatttcaaaactccagtatttcagactttgtatggagcc
cctaatgccggaagcgcctcgacaggtggaattgtgggaaggaaagatagcgacacttcc
ggtacgggtacattcaaaatggtagtggagagatccgatgtaattaaagagacttatata
agcaactcgctgctcggctacagtacagctacaggaaaccttggacccaccctacggttc
ggttttgttatgggcgctcccggctttagcaataaaaatggaaacatcggcgcgttctct
gtttttaattatgccccaacaggaccaatacagttgaaacagatagagggaaaacaggtg
ggcggtggatttggccaaacaatctgtctggttgatgtaaacggagatggtttcgatgaa
atcctggtctcggcaccaaattcgtttaaacaagacataagtaggaaccaaatttttcct
gacgttggaatagtatatgtatactatgggacgggcgatccatcggttttaaaggacact
ccacaagttctagaaggcactcaggtttcattttcacgatttgggacggccatcgtaaat
ataggcgatatcaataaagatggatttaatgatgtagctattggcgcaccatatgaaaac
aatgagggtgccgtttatatatttaatggtaaagaaacgaaaatggatcccgtatattcc
cagaaaattttaggatcccagttacaagatggtattcagggattcgggttctacatctcc
cggacggccaaggacctggatgacaatcaatataatgattttgccgtcggagcctacaaa
tcggacagagtcctactcctgaggtctaggaatatcatcaccgtccattgtaatgtcaca
acatcacccagtcctattcctttaaatgccagtgggacatcctgcagtggtggtgacgtc
aacgccaatccttgtttcaccgcctccttctgttttaattatacaggagaaggaatagat
aatacagagattgatttcatgatttctctggacaccaacgagacacgagcccgggtagag
attttgaggagtgaggaaacagggggaggggcctcagatgacagtctcccggcgggaggg
gcccgggaaggacttactgtagagaacttcatcattttcccaaacatgacgcactgctac
aacgtggaatttacagttccgaccgtagatagaattttcttccaatctatggagaggcca
attgtattggaggtcacttacaaggtcagcaatacgtcacttccgggaaaagtgcgcgca
attctcaacagggacataactcctatatattacggcgaggcacgcattgacactggttgc
aaggcagaagatggatcctgctattctaacttaattgtggacgtgtcttttgataaaaat
ctagtgctcatcggaaacgataccgtcatacagatgaaaacaacgatgagaaaccttggc
gagccttcctttaatacatccttcctcgtccactaccctgaggaagtactgtttaattct
tttaaacctagtgctgtgtcggagcaggtcaattgcgcacaatttaataacactgccata
tactgtatgttgtccgatccgttttaccagcgtatggtagttgaacttgatttccttttt
gaagtgtttcgaaacagtttcgaaaagaacaccggttttgtttcactgccagctcttgaa
atcggtgtgactgcagtaactgacaatgacaccaaccccgccgacaatacggtctccaga
aacgtcagcctcgccgcatacacaagggtcacattacaagtgtccacttctagtgaacag
ataacggcttctaaccagagcgtacagttccagaatacctacacactctacaacgaggga
ccctgtgtcatagagaccgtggatgtcgtgtttcgtgtcccggtcaggtcaatcgacaag
gtgttcgttaaacaaaacaatgtcaaggtgactggcagaaacagaaaagattcatgtaaa
ttgatttactttcccggggatattctaagaacgacaacccagcttcctcttccgggcagc
agcaccttccgatataacatttccgatataaatgtcattccagcaaataatctagtgtct
gaaaatgaaaacatgcgagaaaattcggaatactcgcaagatatttcctgtgatggcagt
gggcaatacttatgtgctaccgtgcagtgtgccgtaaacctggttcagccgatagagagt
gatggccggccgttcgtcatagcacttgatatattgctgcaggacttaccgaaactggag
aaggggaagtcttatttttcctttatcacacaaggacaggtggttcctactacacggtca
cgagcgtcactggttctgatgagaaatgtctcagagcaggcctatgtatccatccttctt
cctaactccttcatacaagatgtggaggagatagatctaaaaatcatcatcctaggatcc
gtgggaggatttctgctgtttctgttgctaggtgtaattctctggaaatgtggattcttt
aagcgggagaaaagaaaacaagtggaagactttaaacgcaagagtagatacagtatgcgc
aaaagcagaatggcgtccgtccgtggccagaaagccgggggtgcgggctcggttcatgct
cccatgttaggggaccaagatatccccaaaaagtttgatgaaatggacgaccatcacttt
acaacctga
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