Crassostrea virginica (eastern oyster): 111113408
Help
Entry
111113408 CDS
T09197
Name
(RefSeq) testis-expressed protein 10 homolog isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
111113408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvn03009
]
111113408
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
111113408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
TFCD_C
Ribosomal_L34e
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
111113408
NCBI-ProteinID:
XP_022307368
UniProt:
A0A8B8BVI1
LinkDB
All DBs
Position
9:complement(71507892..71551271)
Genome browser
AA seq
871 aa
AA seq
DB search
MPKSKKKKNQDFQKVKLKVGRRLQKADNITNASFKTRSVQVVQHIKTGDGTEPTTRRNLN
IRDLLNQCQHYNVSVRMDAVSGLRELVTTFPEILEKQLAQVMERVSQLMVDKESVIRSAL
IKLFQQITPLVGVDKMRPFFPVVSAHVCCAMTHIYEDIQSDSLKILDIFLEYYPSLIMDR
SSQIIPNFIEQISHQNLTKKSSAGCRSLSIKPGGKIRAHTWRNQVLLRLSKLLSTLVKSS
ELSGSKGKVEEELKVVWKDEEEVSCTPFPAHYKKLWAFPGLRTSTMKNVLTREMEERGYN
LREGSGVLRLMETILPILLECWVEATATQHRDMEGHLLSMEACALRYNVVKTIQLLWQYA
EKVIQVGWQNNIVHFLSDFQQYFMKFFPYATHASACLENKKPRTESEQGTVHALNITICD
IMSFFLTINQKAGYSRDLGDTITQYLLNYLQEENYDSSYTLPVLQVIDRLMANNFQDNEK
LHKLLTVLMYRFTQIHDLSKEKKLLLRFFSRLVCKEEVCIREDIKQAFLDSLPALFQSSM
KSPVMSSQILDVLSELSSRALDPSTAGISVFIDSVLGVEVGSLTSLDTGVLRGVVELLYR
VSSLSEEQYTQLARLVQSSHLPARDAGYLLQVMQHRYNRHRLTIEEQGLYINFLFKCAFD
AVECPLHNFAAERDIFSRAVTISETVSDQLLMFPNSEQIVELIFCYLSKALQGRSTGIPE
SIYLLTSSLIMGTKLKTWKYPMSSHVTEQLMDLLWNYLLVVTDNEKRMAWNILLTEEVTE
RGRQLISGGEEVLRIFLQKILCELKNCENIEQIHAVQRAAILILNQGSTWPTLLAPINSQ
PVFDNLEKITGLAAQLGWKKLRTLFSELNKI
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaatctaagaaaaagaagaatcaggactttcagaaagtcaagctgaaggttgga
cgaagactacagaaggcagacaacatcacgaatgccagcttcaaaacaaggtccgtccaa
gtggtacagcatatcaagacaggtgacgggaccgaacccactacacggcgaaacctgaac
atcagggatttgctgaaccagtgtcaacattacaatgtgtctgtccgtatggatgcagtc
agtgggttgagagaacttgttacaacatttccagaaatccttgaaaagcaactagctcaa
gtaatggagcgtgtatcccaattgatggttgataaagaatcagttattaggtctgcacta
attaaacttttccagcaaatcactccattagtaggtgtcgataaaatgcggccatttttc
cctgtggttagtgcacatgtatgttgtgcaatgactcacatttatgaagacattcaaagt
gactctttaaaaattctggatattttcctggaatattatccctctctaatcatggaccga
tctagtcaaatcatcccaaacttcattgagcagatatctcaccagaatctcacaaaaaag
tccagtgcagggtgtagatctctgagcattaaaccaggtgggaagattcgtgctcacaca
tggagaaaccaggtgctcctcaggctcagcaagttgttgtcaacattggtaaagagttct
gaactctctgggtcaaagggaaaagttgaggaagagttgaaagttgtctggaaggatgaa
gaagaggtttcctgtaccccattcccagcacattacaagaaactctgggccttccctgga
ctcagaaccagcacaatgaagaatgtgttgacaagagagatggaggagagaggttataac
ttgagggaggggagcggagtgcttcgtctgatggagacgattctgcccatcctgctggag
tgctgggtggaggccactgccacacaacacagggatatggagggacaccttttgtcaatg
gaggcttgtgcattgcgatacaatgtggtgaaaacaattcagctcttgtggcagtacgca
gaaaaagtcatacaggttggttggcagaacaacattgttcatttcctgtcggacttccag
cagtattttatgaagttctttccttatgccactcatgctagtgcttgtctagaaaacaaa
aagcctaggactgaatctgaacagggcactgtccatgctttgaacatcacaatatgtgac
atcatgtcctttttcctgacaatcaatcagaaagcaggatacagcagagatctgggagac
actatcacccaatacctcctgaactacttacaagaggagaattatgattcttcctacacc
ttaccagttctgcaggtcatagataggctaatggccaacaattttcaggacaatgaaaaa
ctacacaagctattgactgtgctgatgtatcgcttcacacaaattcatgatctttccaag
gagaagaaactgttgttacgattcttctctagacttgtgtgtaaagaagaagtatgtata
agagaggatattaagcaggccttcctggactccctgccagctttgtttcagtccagcatg
aagagcccggtaatgtcatctcagatactggacgttctgtcagagctttccagtcgagcc
ctggaccccagcactgcaggaatctcggtcttcatagactcggtgttaggtgtggaggtg
gggagtctgacgtccctagacactggagtcctgaggggggtggtggagctgctctatcgt
gtctcctccctgtcagaggagcagtacacacagctggcccgcctcgtacagagctctcat
ctgccggcacgggacgcaggctacctgctgcaggtgatgcaacacaggtacaacaggcat
agattgaccatagaggagcagggattgtacatcaactttctctttaagtgtgcatttgat
gcagtggaatgtcccttgcataattttgcagcagagagggatatttttagtcgagcagtg
accatttctgagactgtgtctgatcaactgctgatgtttccaaactcagaacagattgtt
gaacttatcttttgctacctgagtaaagccttgcagggaagaagtacaggcataccagag
tctatttacctactaacaagctctctaattatggggacaaagttgaagacttggaaatac
ccaatgagtagtcatgtaacagagcagttgatggatttgttatggaattacctattggtt
gtaacagacaatgagaagaggatggcatggaatatccttctgacagaggaagtgacagag
agaggcagacagttgatttctggaggggaagaagttttgaggatcttcttacagaaaata
ttatgtgaacttaaaaattgtgaaaatatagaacaaattcatgcagtgcagagggcagcc
atcttgattttaaatcagggttctacatggccaaccttattggcacccattaacagtcaa
ccagtatttgacaatctagagaagattactgggttagctgcacaactaggatggaagaaa
ctgagaactttgttcagtgaattaaataaaatatga
DBGET
integrated database retrieval system
