Crassostrea virginica (eastern oyster): 111113469
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Entry
111113469 CDS
T09197
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K01137
N-acetylglucosamine-6-sulfatase [EC:
3.1.6.14
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn00531
Glycosaminoglycan degradation
cvn01100
Metabolic pathways
cvn04142
Lysosome
Module
cvn_M00078
Heparan sulfate degradation
cvn_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
111113469
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111113469
Enzymes [BR:
cvn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.6 Sulfuric-ester hydrolases
3.1.6.14 N-acetylglucosamine-6-sulfatase
111113469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sulfatase
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
TFIID_NTD2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
SGSH_C
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_Nup120_160
WD_LRWD1
PROPPIN
WDR54
Phosphodiest
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
Bt_P21
Mala_s_1-like
DUF3848
Motif
Other DBs
NCBI-GeneID:
111113469
NCBI-ProteinID:
XP_022307476
UniProt:
A0A8B8BX83
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All DBs
Position
1:complement(44177642..44196603)
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AA seq
1049 aa
AA seq
DB search
MAKNMLLVSTFFIAFVVTFANGNKPNIVFLLTDDQDVKLGGQTPMSKTKSLIGDKGIIFE
NMYVSAPLCCPSRSSILTGKYVHSNGAVNNSLAGNCSSPTWQQTQEVKAFPTYLKEQGYT
TFFAGKYLNQYGTPNAGGVKHIPPGWDWWMGLVGNSKYYNYHLSVNGTLEVHKNDPKTDY
LTDVINRRATSFLDLQNSDSGPFFMMLSTPACHGPFTPAPKYKNNFPNQTAPRDGSYNKH
GYDKHWLIQQAITPLPNDTVTTEDNIFRNRWRTLLSVDDMMENVVNILQKKNLLDNTYIV
FSSDNGFHLGQFSMPSDKRQLYEFDVRVPLMIRGPNVSPGRLITEQVMNIDLAPTFLDMA
GLSSTPEQMDGLSLSPFFSASSNKTWGRSTILIEHQGEFHENTPGCPQFREQNMSNCNNH
CVCEDSWNNTYSCVIRREPSISPSQPGRRIKYCLLKDNENFQEMYDLDGDQNEFKNLATT
LPQNEKKDHETSQKKESRCVQNISEMALNNTSNGEVTVDNLLTYSSISGDATSCDEQFTR
LKNYINKGCEPYRSQLQPLLYPLFVHLYLDQLCNGHKTPAHRFYSKHVKLFENEKTCTQT
LESIHKLVTRTDVLGCLEATDFRENKFKIKLSEEALEYLLRHLKHEDNSTIYQIFNQQIK
VENTESAENETKRKLDLSEGSGLVKEESLEIKEDPEHLEALSALQLSIRQVREGPPCLPS
ICFYTFINAYQGLCTVDISPDKTLLSAGFEDASIKIWSTTPSLLQSTPQSVDPCKLYIAA
DYWNVDLTEESKPRYTETVTLRAHSGSVYKTCFSSDSKYLLSASEDTTVRLWDMSTHSNR
VCYKGHSAPVWDLDVGSVGGFFASCSQDRTAKLWVSDRIYPVRTFAGHNLDVDCVKFHPN
CNYLATGSSDRSVRLWTLQDGKSVRLMHGHRGTIMSLAFSPNGNFLASAGEDKRIRVWDL
SSGQLYKELKGHTDTVHSLSFSRDDNLLASGGLDCSIKVWDIRKGVASSSSHSDGISSPE
LLGSFSSKSAVVTYLNYSEYNVLRGAGSV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaacatgcttttggtgtcaacattttttattgcatttgttgtaacatttgca
aacggcaacaaaccaaatattgtctttctgttgactgacgaccaagatgttaagcttgga
gggcagacaccaatgtccaaaacgaagagccttattggggacaaaggaataatcttcgaa
aatatgtacgtgagtgcgcccctctgttgccctagccggtccagtatcctgactggaaag
tatgtacacagtaatggtgctgtcaacaactctttggcgggaaactgcagcagccccacc
tggcaacaaacccaggaggtcaaggcctttcctacctacctcaaggaacaaggatatacc
accttctttgcaggaaaatacctcaatcagtatgggactccaaatgcgggaggagtgaag
cacatacccccagggtgggactggtggatgggcctggtaggaaattctaagtactacaac
taccacctgtctgtgaatggaacactggaggttcacaagaatgaccccaagacagactac
ctcactgatgtcatcaacagaagagctacttcctttttggacctgcagaactcggactcc
ggacctttcttcatgatgttatccacccccgcttgtcatggaccattcactccagccccc
aaatacaaaaataatttccccaatcagacagctccacgtgatggcagttacaacaaacac
ggttatgacaagcattggttgattcaacaagcaataacacctctgcccaacgacacagtc
actacagaggacaacatattcagaaacagatggcggacgcttctttcggttgatgacatg
atggaaaatgtcgtgaacatcctccagaagaagaaccttctggataacacgtatattgtg
ttttcttctgacaatgggttccatttaggtcaattttcaatgccctcagacaaacggcaa
ttgtacgaatttgatgttcgagtgccattgatgattcgtggacccaatgtgtcacctggg
aggctgattacggaacaagtcatgaacatcgatttagcgccgacatttctggatatggcg
ggtctttctagcactccagagcagatggatggactgtccttatccccattcttttctgcc
tcttccaacaaaacatggggccggtctaccatactaattgaacaccaaggagaattccac
gaaaacacacccggatgtccacaattcagggaacaaaatatgtctaattgtaacaatcat
tgcgtatgtgaggattcatggaacaacacatactcctgtgtaatacgacgggagccctca
atatcgccctctcagcctggccgtcgtatcaaatattgccttctgaaagacaacgagaat
tttcaagagatgtacgatttggatggtgatcaaaatgaattcaagaacttagccacaact
ttaccacaaaatgaaaagaaggaccatgaaacctcacaaaagaaggaatcgagatgtgtt
caaaatattagtgaaatggcgcttaacaataccagcaatggggaggtaactgtggacaat
cttttaacctacagcagcatcagcggagatgccacatcctgtgatgaacaatttaccagg
ctgaaaaattacataaacaaaggatgtgagccatacaggagtcagcttcaacccttgctg
tatcctttatttgtacacctctatcttgaccagttgtgtaatggacacaaaacaccagct
cacagattttacagtaaacatgtgaagctctttgagaatgagaagacttgtactcagaca
ctggaatctattcacaaacttgtaactcgaacagatgttctgggctgtctggaggccaca
gatttcagggagaataaatttaaaataaaattatctgaggaagctttagagtacctgctc
agacatttaaagcatgaagacaacagcacaatatatcaaattttcaaccaacagattaaa
gtggaaaatacagaatcagctgaaaatgagacaaaaagaaaattagatttaagtgagggt
tcaggcttagtgaaggaggagtctcttgagataaaggaagacccagagcaccttgaggcg
ttatcagccctacagctgtcaatcagacaggtgagggaggggcctccctgtctaccctcc
atctgcttctacacattcatcaacgcctaccaagggttgtgcactgttgatatttcccct
gataaaaccttgctaagtgcaggctttgaggatgcatctataaagatttggagcaccacc
cctagtcttctacaatccacccctcagagtgtggatccctgtaaactctacatagcagca
gattactggaatgtggatctcacagaggaaagtaagccccgctacactgagacggtcacc
ctgagggcccacagcggctctgtgtacaagacctgcttctccagcgactccaagtacctc
ctgtcagcctcagaggacactactgttcgactatgggatatgagtacacactctaataga
gtgtgttacaaaggtcacagtgctcctgtatgggatctggatgtgggcagtgtggggggc
ttctttgctagctgttcacaggaccggacagccaaactatgggtcagtgacaggatatat
cctgtgcggacatttgctggccacaacctggatgtagattgtgtgaagttccatcctaac
tgtaactacttagcgaccggttcctccgaccgctcagttcgactctggaccctacaggat
gggaagtcagtacgactgatgcacggccacagagggaccatcatgtccttagctttctca
cctaacggcaacttcctggcttcagcaggagaggacaagcgaattcgagtgtgggatttg
agttctggtcagctgtataaggaactcaagggacacacagacacagtccactccctgtcc
ttcagcagagacgataacttactggcatctggtggtttggactgtagtataaaggtctgg
gacatcaggaaaggcgtggccagtagcagttctcactcagatggcatttcatcccctgag
ctgcttggatccttctcctcaaagtcagcagtggtcacctacttaaattactccgagtat
aatgttctcagaggagcagggtctgtgtga
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integrated database retrieval system