KEGG   Crassostrea virginica (eastern oyster): 111114212
Entry
111114212         CDS       T09197                                 
Name
(RefSeq) coatomer subunit alpha-like isoform X1
  KO
K05236  coatomer subunit alpha
Organism
cvn  Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvn04131]
    111114212
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvn04147]
    111114212
Membrane trafficking [BR:cvn04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    111114212
Exosome [BR:cvn04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   111114212
  Exosomal proteins of bladder cancer cells
   111114212
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WDR55 Beta-prop_WDR3_2nd WD40_CDC20-Fz TPR_COPA_B WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_SCAP WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_Aladin Beta-prop_IFT140_1st NBCH_WD40 WD_LRWD1
Other DBs
NCBI-GeneID: 111114212
NCBI-ProteinID: XP_022308208
UniProt: A0A8B8BXU5
LinkDB
Position
1:complement(573630..585444)
AA seq 1240 aa
MLTKFETKSARVKGLSFHPKRPWVLTSLFNGVIQLWDYRMCTLIDKFDEHDGPVRGICFH
TQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHQDYIRTTYFHHEYPWILSSSDDQTIRVW
NWQSRNCVSVLAGHSHFVMCAMFHPSEDLIVSASLDQTVRVWDISAISNSYKSSTGLRKK
NVSPGPGGIEDRIKPSSQTDLFGVSDTVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQ
VKLWRMNDSKAWEVDTCRGHYNNVSCCLFHPRQELILSNSEDKSIRVWDMSKRTGVQTFR
REHDRFWVMSAHPSLNMFAAGHDSGMIVFKLERERPAYAIHNNTLFYVKDRYLRKLDFST
SKDNPLIQLRGGSRNPVFSMSYNPAENAVLLCTRASNAENSTYDLYCLPKSSDSQNPDAP
EGKRSSGLSAIWVARNRFAVLDRTHNIVIKNLKNEITKKVQAPNCDDIFYAGTGCLLLRD
ADAVTLFDVQQKRSLASVKISKVKFVVWSSDMSHVALISKHIIAICNRKLENLCTIHENI
KLKSGAWDESGVFVYTTSNHIKYALTNGDHGIIRTLDLPIYITRIKGNNVFCLDREVRPR
VLSIDPTEFKFKLALVNRKYEEVLHMVRNAKLVGQSIISYLQKKGYPEVALHFVKDEKTR
FGLALECGNIEIALEAARALDDQSCWEKLGEAALLQGNHQVVEMAYQRTKNFDKLSFLYL
ITGNLEKLRKMMKIAEIRKDTSGHYQNALFLGDVGERVKILKGVGQKSLAYLTAATHGME
EEAEQLKESFGEEEKIPDLFPQAQLLQPPVPIMQQESNWPLLTMTKGFFEGAMAAGTATG
KRTGLAAAAVDIEEGAGEGWGDDADLVLDDEGGFGGEGLDDEALVGGASEEGGGWDVGDD
DLELPPDLDVGPAAGGGGEEGFFVPPTKGTSQSQVWCNNSQLPVDHVLAGSFETAMRLLH
DQVGVVQFDTYKQLFLQTYSRSRTCYQGLPSIPPLFGFPHRNWKEAGARAGMPAVGLRLN
TLVQQLQVAYQMTTTGKFGEAIDKFRSILLSVPLLVVDTKQEISEAQQLVEICREYIVGL
SMEQTRKEMPKATLEEQKRVCEMAAYFTHCNLQPIHMILTLRTALNLFFKLKNYKTAASF
ARRLLELGPKPDVATQTRKILSACEKTPTDAHELKYDQHNPFDICAATYVPIYRGKPVVK
CPLSGACYQPEFKGQACRVTQVTEIGKDCIGLRISPIQFR
NT seq 3723 nt   +upstreamnt  +downstreamnt
atgttaacaaaatttgaaactaagtcggcgagagtaaaaggactctcttttcaccctaag
agaccatgggtgttgacaagtctcttcaatggcgtgatacagctgtgggactacagaatg
tgtacactcatagacaagttcgatgaacatgatggtccggtgagaggaatctgttttcac
acacagcagccactgtttgtgtccggaggtgatgactacaaaatcaaggtttggaactat
aaacagagacgatgtctgttcactttacttggacaccaggattacatcaggacaacatat
ttccaccacgagtacccatggatcctgagctcatcagatgatcaaacaatccgagtgtgg
aactggcagtctcgaaactgtgtcagtgtactggctggtcacagccactttgtgatgtgt
gccatgtttcacccctcggaggacctcattgtgtcggcctctctcgatcagaccgtccgt
gtctgggacatctcagccatcagcaactcatataaatcttcaacaggattgagaaagaag
aatgtgtctcccggtcctgggggaatagaggaccggatcaagccctccagtcagacggac
ctgttcggggtgtctgacacggtggtcaagcacgtcctggagggtcacgacaggggggtt
aactgggccgccttccaccccacccttcccctcattgtctcgggggcggacgatcgacag
gtcaaactctggagaatgaatgattccaaggcctgggaagtggacacctgccgtggtcac
tataacaacgtgtcctgctgtttgtttcacccccgacaggagctcattctcagcaactcc
gaggacaaaagtatcagggtctgggacatgagcaaaaggaccggagttcagacattcaga
agagaacacgaccggttctgggtcatgtcagcccacccctctctgaacatgtttgcagcg
ggccacgacagtgggatgatcgtgttcaagctagagcgtgagcgtccagcctatgctatt
cacaacaacacgttgttctacgtcaaggacagatacctgaggaagctggacttctccacc
tccaaagataaccctctgattcagctacgaggaggcagcaggaacccagtgttcagcatg
tcctataacccagctgaaaacgctgttcttctctgcactagagccagtaatgctgagaac
tccacatatgatttgtattgtttgccaaaatcatcagactcccagaaccctgatgctccc
gagggaaagagatcctctggcttgtctgctatctgggtcgctcgcaacagatttgctgtc
ttggacagaacacacaatattgtgattaaaaatctgaagaatgaaataaccaaaaaagtg
caggctccaaactgtgacgacattttctacgctggcacaggctgtttgttgctgagggat
gctgacgcagtgaccctctttgatgtgcaacagaagagatccttggcctcggtgaagatc
tccaaagtgaagtttgtggtgtggtcctctgatatgtcacatgttgctctcatcagcaaa
cacattattgccatctgtaacaggaagttggagaacttgtgtacaatacacgagaacatc
aaactgaagagtggagcctgggatgagtctggtgtgttcgtgtacaccaccagtaaccac
atcaagtacgccctgaccaacggtgaccacggtatcattcgtaccctggacctgccgatc
tacatcactcggatcaagggcaacaacgtgttctgtctggaccgggaggtgaggcccagg
gtcctctccatcgaccccaccgagttcaagttcaaactggccctggtcaataggaaatat
gaggaggtactgcacatggtgaggaatgctaagctggtgggacagtccatcatctcctac
ctccagaagaagggctacccagaggtcgctctccactttgtcaaggacgagaagacacga
ttcggactcgctctcgaatgtggaaacattgagatcgccctggaggcggcgcgggccctg
gacgaccagtcctgctgggagaagctgggggaggctgccctgctacaaggaaaccaccag
gtggtggagatggcctaccagaggaccaagaactttgacaaactctccttcctctatctc
atcaccggcaacctggagaaactccgcaagatgatgaagattgctgagatcaggaaggat
acgagcggtcactaccagaatgcactgttcctgggagacgtaggggagagagtcaaaatt
ctgaagggagttgggcagaaatccttggcctatctgacggcagccacccatggtatggag
gaggaggccgagcagctgaaagagagctttggggaggaggagaagatcccagacctcttc
ccccaggcccagctgctccagcccccagtccccataatgcagcaggagagcaactggcca
ctgttgaccatgaccaagggattctttgagggagctatggccgccggaacagccactggt
aagcgcaccggattggcggcggccgcggtggacattgaagagggcgccggggaggggtgg
ggagacgatgccgacctggttctggatgacgaaggaggattcggtggggagggcctggat
gatgaggcgctagtcggaggagcctcagaggagggagggggatgggatgttggagacgat
gaccttgaactccctcctgaccttgatgtgggtcctgccgccgggggaggtggagaggag
ggattctttgttcctcccaccaaaggaaccagtcagtcacaggtttggtgcaataactct
cagttacctgtggatcatgttttagctggttcgtttgagacggccatgcgtctactgcac
gatcaggtgggcgtggtccagtttgacacctacaaacagctgttcctacagacctactcc
cgctcccgcacctgttaccagggcctgccctccatacccccactctttggattcccgcac
agaaattggaaggaggcgggggcgcgggccggcatgcccgcggtggggctgaggctgaac
actctggtccaacagctacaggtggcgtaccagatgaccaccaccggcaagttcggcgag
gccatcgacaaattccgcagcatcctgctcagcgtacccctactggtggtcgacaccaag
caggagatttccgaggcccagcagttagtggagatctgtagagagtacattgtaggattg
tccatggagcagaccaggaaagaaatgcccaaagccacactggaggagcagaaaagagtc
tgtgagatggctgcctatttcacacactgtaacctacaaccaatacacatgatcctaact
ctaaggacggcattaaatctcttcttcaaactcaaaaactacaagacagctgcttcgttt
gccaggagactgttagaactcggacccaaacctgacgtggctacacagactaggaagatt
ttgtcagcatgtgaaaaaacgccaactgatgcccatgagctgaaatatgaccaacacaat
ccatttgacatctgcgcagccacatacgttcccatttacagaggtaaacctgtagtcaag
tgccctctgagtggggcctgctatcaaccagagttcaaaggtcaagcctgccgagtcaca
caggtgacggagattggaaaagactgcataggtttaaggatcagtcctattcagtttcgg
tga

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