Crassostrea virginica (eastern oyster): 111114242
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Entry
111114242 CDS
T09197
Name
(RefSeq) DNA mismatch repair protein Mlh1-like
KO
K08734
DNA mismatch repair protein MLH1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03430
Mismatch repair
cvn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111114242
03460 Fanconi anemia pathway
111114242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111114242
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
111114242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
E2_bind
Motif
Other DBs
NCBI-GeneID:
111114242
NCBI-ProteinID:
XP_022308233
UniProt:
A0A8B8BXX0
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Position
9:complement(87239509..87283979)
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AA seq
612 aa
AA seq
DB search
MAVPPGTIKRLDEVVVNRIAAGEVIQRPANALKEMIENSLDAKSSSIQVTVKQGGLKLLQ
IQDNGSGIRKEDMEIVCERFTTSKLQKFEDLNSIATYGFRGEALASISHVAHVTITTKTA
DSKCAFKGSYVDGKLKEAVKPCAGNVGTQITVEDLFYNISTRRKALKSPSEEHAKIAEVV
SRYAIHNCNVGFTLKKQGENTADVRTPAKSSHVDNIRTIYGPSVAKELLEIEHEDKKLSF
RCHGFVTNANYSMKKGIFLLFINHRLVDSSSLRKALDTVYQAYLPKNMHPFIYLSVEIAP
QNVDVNVHPTKHEVHFLHEDAIISSLQSAIETKLLGANTSRTYYTQALLPGAPVSLDNKE
VDPAASKSSGAPEKTYAHHMVRTDSREQKLDAFIKPIQTVSSVDRLQQATSLADPQPMDA
STKEQEMELPSCGSQQKKRPVRLTSVLTLQEEIRQNMHKNLREMFQFHKFVGCVNREFSL
MQHQTKLYLVNTSKLSCELFYQLMIFDFGNYGKLRLAEPAPIHDLAMLALDLEESGWSEA
DGPKDDLAKYIVDFLKSKAEMLSDYFSMEIDQEGNLCTLPLLLEHYTPNMEGLPMFVLRL
ATEARLFFIHNN
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgccaccgggtacgataaagcgcctggacgaagtggtggttaatcgtatagcc
gctggagaggtaatccaacgaccagccaacgccttaaaggaaatgattgaaaacagtctg
gatgccaagtcctccagcatacaggtgactgtgaaacaaggaggactgaaacttctacag
attcaggataatggctcgggaatccggaaagaagacatggagattgtttgtgaaaggttc
accaccagcaagctacagaagtttgaggacttgaactccattgctacctatggatttcga
ggagaagcattggccagcataagtcatgtggcacatgtcaccataacaaccaaaacagca
gattctaaatgtgcattcaaaggaagttacgtggatggcaaacttaaagaggcagtgaaa
ccctgcgcaggaaatgttggcacccagatcacagtagaggatctgttttacaacatatcc
acgaggaggaaagctttgaaaagtccatcagaggagcacgccaaaatagcagaagtggtt
agcaggtatgcgatacataactgcaatgtagggttcactctgaaaaagcaaggggagaat
actgcggatgtgagaactccggccaaatccagtcatgttgataacatccgaaccatatac
ggacccagtgtggcaaaagaactgttggagattgaacacgaagacaagaagttgtccttc
agatgtcatggctttgtcaccaatgccaactactccatgaaaaaaggcatctttctcctc
ttcatcaaccatcgactggttgactcttcatccttgcgcaaagccttagacactgtgtac
caggcatacctgcccaaaaacatgcatcctttcatttacctcagtgtggagatcgcccca
cagaatgtggatgttaacgttcatcccacaaaacatgaggtccacttcctccatgaagat
gccatcatctccagcttacagtcagccattgagaccaagctactgggagccaacacaagt
cgcacttactacacacaggctctactgcctggtgctccagtctctctagacaacaaggag
gtggatccagctgcttctaaatccagtggtgcaccagagaagacctatgcccatcacatg
gtgaggacagacagtcgagaacaaaagctggatgccttcataaagcccatccagactgtc
tcctccgtagataggctgcaacaagccacctcattggctgatccccaaccaatggacgcc
tcgacaaaggagcaggagatggagttgccgagctgtggaagccagcagaagaagaggcca
gtcaggctcaccagtgtactgacattacaggaagagatcagacagaacatgcataaaaat
ttgagagaaatgttccagtttcacaaatttgttggatgcgtaaatagagagttttctctg
atgcagcatcagacaaaattatacctcgtcaacacaagcaaactaagctgtgagctgttt
tatcagttgatgatcttcgactttggaaactatggaaaactccgcctggcagagccagcc
cctattcacgaccttgcaatgcttgcccttgacttggaggagagtggatggagtgaggca
gatggacccaaggacgaccttgccaagtacatagtggacttcttgaagtcaaaggcagaa
atgttgtctgactatttctccatggagatagaccaggagggtaacctgtgcactctgcct
ctactactggagcattacactcctaacatggagggactacccatgtttgtcctcagattg
gctactgaggcaagactctttttcatccataacaattag
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