Crassostrea virginica (eastern oyster): 111114408
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Entry
111114408 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvn04054
]
111114408
Pattern recognition receptors [BR:
cvn04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111114408
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR_2
TIR
LRR_4
LRR_14
LRR_9
DUF3796
Motif
Other DBs
NCBI-GeneID:
111114408
NCBI-ProteinID:
XP_022308409
UniProt:
A0A8B8BZY4
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Position
9:101233655..101235951
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AA seq
765 aa
AA seq
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MLFIIHALVIGYVFLTIEASNCSSNEKCQCVDFKGNLFAYCNGLGLKSSPSFSDEVIGIS
LVNNEISEFPTSLPFGISYLDVSRNSLREIRQNALANYTLLRNLSVSKNELKSIELGLLR
KAGHLIHLDLSLNKELIIDVLVNISYDLKSSTSIRVLNLEYLQCTFGTSFIVKKYHIAYL
RHTFLEELNLASNRITSFEFGVFTMLPKTLKYLNIANNVLSYGYYITEFGSLQNLVTLNI
SYQAFFHHVWVQNFLIRCNDTRDPCNSVKTDVVRNFTDSPNTGKVIHQFSPLPKNITIYI
PPKMEAFYFHDNMYKLELLDFTLKSVDGLKLTHLHFQNNIINSLKGHIIGLRSVVYADLS
NNVCSYISTNFFNDFQNMSFPDLSHNALGDIIENDVNGNIFCNLFKLKYLNLTRNRIVRL
PDPIFSNLVHLKQLNLSYNALSEFTIPINHMKELRCLDLSNNQLSFLDQQTRDTLETLSR
DKQISVNLKANRLLCNCEHMDFVNXMRQSRNVNFVNFNEYTCSYMNSSQVSFSQIDRLLQ
HMEKRCASYTFTIVFMTSLIIVILTTIFSRIIYRYRWKLRYMYYVAREKYRDNVQGSDFT
GGETSYYFDAFVSYADEDKRFVIELVKFLEKEHNLKLCIHHRDFIPGTRIADNITNAIHY
SRRTVCIMTSTFLESYWCMFELNMARMEAIYSREGENVMFLVVLEKNAMAKLPFSLIDLV
ESRSYLEFPENEDADESSAFRSKLGATLKSHDCEFRSLVTSRRPE
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttatcatacacgcgctggtcattgggtatgttttcctcactatagaggcatct
aactgttcttcaaacgagaagtgccaatgtgttgactttaaaggaaaccttttcgcatat
tgtaacggcctcggcctgaaatcatcaccatcatttagtgatgaagtcataggaatcagt
cttgtgaacaacgaaatttcagagtttcctacgtcacttcccttcggcatcagttacctg
gatgtatctagaaactcgctgcgagaaatccgtcaaaacgcactggctaattatacgtta
ttgcgtaatttaagcgtgtcaaaaaacgaactcaaatcgatcgaattgggattactcaga
aaagctggacatttaattcacttggatttgtctctcaataaggagctaatcattgatgtc
ttggtgaatatttcatatgatttgaaaagctctacttcaattcgagtgctgaatttggag
tatctgcagtgcacatttgggacaagcttcattgtcaagaaatatcatattgcatatttg
agacacacgttcttagaagagttgaatttggcgtccaatcgcatcactagttttgagttt
ggtgtcttcacaatgttacccaaaacgcttaaatatcttaatatagccaataatgtgctg
agttatggctattatattaccgagtttggatctttacagaatctcgtcaccctgaacata
agttatcaggccttctttcatcatgtttgggtgcaaaattttctcattcgttgcaatgat
acgcgagatccgtgcaattctgtgaaaacagatgtagtacgcaatttcactgatagtcca
aacacaggaaaggtaatacatcaattttctcctttgccaaagaatatcactatctatatt
ccgccaaagatggaggcgttttactttcatgataacatgtacaagttggagcttttggat
ttcactctcaaatcagtggatgggcttaaactgacacatttacattttcaaaataatata
atcaacagcttaaaaggacatatcatcggtttaagaagtgtagtttatgctgacttatct
aacaacgtctgtagttatatatctacgaattttttcaatgattttcaaaacatgtcattt
ccagatctctcccacaacgcattgggagacattatcgaaaacgatgtcaatggaaacatt
ttttgcaatcttttcaagctaaaatatctaaacctgacaaggaaccggatcgtccgccta
ccagatcccatatttagtaaccttgttcatttaaaacaactcaaccttagctataacgct
ttaagtgagtttacgattcctataaatcacatgaaagaactccgttgtttggacctctcc
aataaccagttatcgttcctggatcagcagacacgtgacactctagagacattatcacgt
gacaaacaaatttccgtgaacttgaaagccaaccgattactttgtaactgtgaacacatg
gactttgttaatnagatgaggcaatcgagaaacgtaaattttgttaattttaacgagtat
acgtgttcttatatgaactcttctcaagttagtttttcgcaaatagatcgtttacttcaa
cacatggaaaaaagatgtgcctcatacacgtttacaatagtttttatgacatcactaatc
atcgtgatcttgactacaatattcagccgaattatctatagatatcggtggaaactgagg
tatatgtactatgtagcgagggaaaaataccgagacaatgtccagggttctgacttcaca
ggtggcgaaacttcatattatttcgatgctttcgtctcctacgctgatgaagataaacgg
tttgtgatcgagttagtaaaatttctggagaaagaacacaatttaaaattgtgtatacac
catcgcgattttatccccgggacaagaattgcagacaatatcaccaacgccattcattat
agcagacgaactgtgtgtatcatgacgtcaactttcctggaatcttattggtgcatgttt
gaactcaatatggcgcgcatggaagccatttattctcgtgagggcgaaaacgttatgttt
ttggtcgtgctagaaaaaaatgccatggccaaattacctttctctctcatagaccttgtc
gaaagcaggtcatacttagagtttcctgaaaacgaggatgccgatgaatcgagcgctttt
cgttcaaaacttggagccaccctgaagtctcatgactgtgaattcagatcactagtaact
tcaaggagacctgagtga
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