KEGG   Crassostrea virginica (eastern oyster): 111114565
Entry
111114565         CDS       T09197                                 
Name
(RefSeq) WD repeat-containing protein 61-like
  KO
K12602  WD repeat-containing protein 61
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111114565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvn03019]
    111114565
Messenger RNA biogenesis [BR:cvn03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     111114565
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd WD40_Gbeta WDR55 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_ACSF4 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_VPS8 eIF2A Beta-prop_WDR41 PROPPIN Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 RMC1_N NBCH_WD40 Beta-prop_HPS5 WD_LRWD1 Beta-prop_NWD2_C Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_WDR75_2nd Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Tricorn_2nd Ge1_WD40 WD40_like Cytochrom_D1 WDR54 Beta-prop_RSE1_2nd GSDH Vgb_lyase
Other DBs
NCBI-GeneID: 111114565
NCBI-ProteinID: XP_022308634
UniProt: A0A8B8C0K8
LinkDB
Position
9:complement(40510692..40523390)
AA seq 311 aa
MANTGLSQLYSIIFKQENAHEDSIWSCAWQQSDRDRSENIITGGIDDLVKVWKWTGEKLE
LRHVLEGHQLGVVSVDMNLSGTLAASSSLDSHVRVWDVDTGKCIKSMEAGPVDAWTLSFS
PDSRILATGSHNGKINLFGVESGRKEESLDTRGRFTLSIAYSPDGKLIASGAIDGIINIF
DTQTGRLIHTFEGHAKPIRSLCFSPDSQLLVTGSDDNQIKIYDVQHANSVGTLSGHGSWI
LSVDFCPDNTHFVSSSSDKTVKIWNAGSRQCVHTFYDHSDQVWSAKYNCSGSKIVSVSDD
RAVHIYDCPPV
NT seq 936 nt   +upstreamnt  +downstreamnt
atggcgaacaccggtctctcacaactgtattccataatattcaagcaagagaatgctcac
gaggacagtatctggagctgtgcctggcagcagagtgacagagaccggtcggagaacatc
atcactggcggcatcgacgatctcgtcaaagtctggaaatggacaggagaaaagttagaa
ctacgacacgtccttgagggtcatcagcttggggtcgtatccgtggatatgaacctgagt
ggcacgttggcagcctccagcagtttagacagccatgtgagggtgtgggatgtggacacc
gggaaatgcatcaaaagtatggaggccgggccagttgatgcctggactctgagcttctct
ccagattccagaatcctggctacggggagtcacaacgggaaaatcaacctgttcggagtg
gagtccgggcgtaaagaggaatcgctggacaccagagggcgcttcacgctgagtattgcc
tatagccctgatggtaaactgattgcctctggagccattgacggtatcatcaatatcttt
gacacgcagaccggccgattgatacacacttttgaaggtcacgccaaaccgattcgctcg
ctgtgtttctccccggattcccagctgctggtgacggggtccgacgacaaccagatcaaa
atctacgacgtgcagcacgctaattctgttggaaccttatccggacatggatcctggatt
cttagtgtggatttctgtccggataacacccactttgtatccagttcttctgacaaaaca
gtgaagatctggaacgccgggagcagacagtgtgtacacacattctacgaccactcagac
caggtatggagtgccaagtacaactgctccgggtccaagattgtctccgtgtcagacgac
cgggccgtccacatctacgactgtccccccgtgtga

DBGET integrated database retrieval system