Crassostrea virginica (eastern oyster): 111114820
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Entry
111114820 CDS
T09197
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111114820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvn03021
]
111114820
03036 Chromosome and associated proteins [BR:
cvn03036
]
111114820
Transcription machinery [BR:
cvn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111114820
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111114820
PBAF complex
111114820
GBAF(ncBAF) complex
111114820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
111114820
NCBI-ProteinID:
XP_022309008
EnsemblRapid:
LOC111114820
UniProt:
A0A8B8C078
LinkDB
All DBs
Position
9:1824561..1845232
Genome browser
AA seq
520 aa
AA seq
DB search
MMQQPHGQHRYPPPGPQVRSYQQPGYPGGPPRPGGYGPGPQMGPRMMSHGGMPPHPYAGG
SPSSKSARPEKSKENSARDKTKDLGSMRPGMSPGMHPPPHGMQTPHGMDRKRPPDPRGTP
QQMKQAKKKKKVADKILPQRVRDLVPESQAYMDLLAFERKLDATIMRKRLDIQEALKRPM
KQKRKLRIFISNTFYPAKAEGEDGDETVASWELRVEGRLLEDAASAKLNDNSKMKRKFSS
FFKSLVIELDKELYGPDNHLVEWHRTPTTQETDGFQVKRPGDQNVKCTVLLMLDYQPPQF
KLDPRLARILGVHTQTRPVIINALWQYIKTHKLQDHHEREYINCDKYLEQIFECKRMKFA
EIPGKLHNLLMPPDPIVINHVITVEGPDARKTACYDIDVEVDDTLKQQMNSFLLSTASQH
EIGSLDSKIHETVETINQLKTSREFFLSFTKNPQEFINNWLISQSRDLKTMTDVVGNPEE
ERRADYYYQPWSQEAVCRYFYSKVQQRRMELEQALGIRNS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacaacctcacggacagcatagatatccgccaccggggcctcaggtgaggtcc
tatcagcaacctggatatcctgggggaccacctcgacccgggggatatggtcccggaccc
cagatgggccctagaatgatgagccatgggggcatgccaccccacccatacgcaggagga
tcgcctagttctaagagcgcaagacccgaaaaatccaaggagaattctgctcgcgataag
accaaagacttgggatccatgcgacctggaatgtctcccggaatgcaccccccgccccat
ggaatgcagaccccccacggaatggacaggaaaaggccacctgaccccaggggaacccct
caacaaatgaaacaggctaagaagaaaaagaaggtggcagacaaaatccttccacagagg
gtcagagacttggtgcctgagtcccaggcttacatggatctgctggcctttgagaggaag
ttggatgccacgattatgagaaagaggctggatatacaggaggccctcaaacgacccatg
aagcaaaagagaaagctaagaatctttatttccaacacattctacccagccaaagcagaa
ggggaagatggagatgagactgttgcatcctgggaattgagagttgaagggagactactg
gaagatgcggccagtgctaagctgaatgacaacagtaagatgaagaggaagttctcgtcg
ttcttcaagagcctggtgatcgagctggataaagagctgtatggaccagataaccacctg
gtggagtggcataggacacccaccacacaggaaacagatggattccaagtcaaacgcccg
ggggaccagaatgtaaaatgcactgtccttctgatgcttgactatcagcctcctcagttt
aagctggacccccgcttggcccggatcctgggggtccacactcagacccgaccggtcatc
atcaatgccctgtggcagtacatcaagactcacaaactacaggaccaccacgagagagag
tacatcaactgcgataaatacttagagcagatttttgagtgcaagaggatgaagtttgct
gagattccaggaaaactgcacaatcttctgatgcccccagaccccattgtcataaaccat
gtcattactgtggagggcccagatgccagaaaaacagcctgttatgatatagatgtagaa
gtggatgacacattaaaacaacagatgaattcatttctcctctccactgccagccaacat
gaaataggatcactggattccaagatccacgaaactgtggagacaattaatcaactgaag
acgagccgtgaattcttcttgagcttcaccaaaaatcctcaggagttcatcaacaactgg
ttaatctcccagtcccgggatctcaagacgatgacggacgtggtggggaatccagaggaa
gagagacgggcggactactactaccagccgtggtcccaggaggccgtctgtcgctacttc
tacagcaaggtccagcaaaggagaatggagctggaacaagcacttggaatacgcaattcc
tga
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