Crassostrea virginica (eastern oyster): 111115325
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Entry
111115325 CDS
T09197
Name
(RefSeq) transcription initiation factor IIA subunit 2-like
KO
K03123
transcription initiation factor TFIIA small subunit
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111115325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvn03021
]
111115325
Transcription machinery [BR:
cvn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIA
111115325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIA_gamma_N
TFIIA_gamma_C
Motif
Other DBs
NCBI-GeneID:
111115325
NCBI-ProteinID:
XP_022309716
UniProt:
A0A8B8BLH2
LinkDB
All DBs
Position
9:complement(16814331..16818882)
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AA seq
107 aa
AA seq
DB search
MSYQLYRNTTLGHTLQESLDELIQLGQITPQLALKVLLQFDKAINTALANRVKNRIQLKG
KLNTYRFCDNVWTFVLNNVDFRDVQELAKCDKVKIVACDGKSASGHE
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaactctatcgaaacacgacccttgggcatacattacaggaaagtctagac
gaattgatacagttaggacaaatcacccctcagctggcattaaaggttctcctgcagttt
gacaaagccatcaacacagccctggccaacagagtcaagaataggatacaactcaaggga
aaattgaatacctatcggttttgcgacaacgtttggacatttgtgttgaacaatgtggac
ttccgagacgtgcaggaactggccaagtgtgacaaagtgaagatagtggcatgtgatggc
aaaagtgcttctgggcatgaatga
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