Crassostrea virginica (eastern oyster): 111115333
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Entry
111115333 CDS
T09197
Name
(RefSeq) Werner syndrome ATP-dependent helicase-like isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvn03032
]
111115333
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111115333
Enzymes [BR:
cvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111115333
DNA replication proteins [BR:
cvn03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
111115333
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
111115333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
111115333
NCBI-ProteinID:
XP_022309724
UniProt:
A0A8B8C3Q7
LinkDB
All DBs
Position
9:82396361..82432216
Genome browser
AA seq
1130 aa
AA seq
DB search
METDTLIKKLQDLRKSVTSIISQVVSGEDLNNCLDSGDSQQVQGYLKDAGNLLTSVSRIL
KGETVQWDLDNTRCCQCGKIRNNDGKPAVKSPQMSSNDSVKTVEKDYLKSEKSAGESVSE
SNFHPVKPGCNLDSKGWNQNGREGSDSRLKDQEDADSDVTDDDDNDSSSLLHHSHNAGQF
HDSPEGQNPEEIADHGGNFEEDGFGSDDDFNDNVLQEIDEAERSFNCNKNIEETDGDEDP
ENCPSDPKYLEVLKQYFGYSKFRPMQWKIINSVLNDKRDSCVVMATGYGKSLCYQYPSVF
TKRTTVVISPLISLMQDQVMGLKAANIEACFLGSAQENSTQVCHDLKRGKYRVLYITPEY
ASGAGVTHLKEIDKEVGLDLIAIDEAHCVSQWGHDFRSAYRSLGQLKQSFPQVPVLALTA
TATHEVRLDICRSLRLRNPSIICTGFDRPNLFLSVSLKSDTSSDLRSQMTKQGNQFNFDG
PTIIYCPTKKATNEVAAIVKGMNIPSAPYHAGLSQADRNQAHRQFVNDQVQVIIATVAFG
MGIDKPDVRKVIHYGAPKDIESYYQEVGRAGRDGMPSQCHVFYAEKDFLTSRHFINEMQN
EKFREHKMKMLGKMQQYLKTSTCRRRLLLSHFENKKLDDLGGTTNCCDNCRRKLERSRQQ
SYYDSKNWSSVLPPGIGPEDGEQDFAKEAQDLFDAIQTLGSRFGLATVVLFLSGSHSQRV
SRFTNLSGFGKGKYRKPNWWKGFGKALIYEGYLKEVAVKDSFGSTVELSRKGISWKGAGN
SSLKMTPTSDMLAETRPPVAVAVRPAAYAAPTRSYSGPASTSDWSTKPKETAKIPSPRKP
EVDEKTRKMQADLYSKLVKERNDLAQETGYTPHSIASNKVLLDLAKIRPSSKENLLRLED
FPQAKVEKFGPMFVKILTDYCHQNEAKMDEFPEIKLQKSNDDLQRELCRLTETQRTTYVM
FCLENKSLEEVASLRGLKTTTVVSHLCEAIKNGLEVDPVRVGVTPQIDSLITKVIRGPTI
MSVISKLTPIKDQLPDYIEYNQIKVVIAGLVQKYGQVLKETGDYMVDQPTTQDLTEEGIV
DGGNAVGSQSSQSFSQSETVGGQKRKLPSWMNGKSKPVMSKKMRSNSLFK
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggagacagatactttgatcaagaagcttcaagatctgaggaagtccgtcactagcatc
atcagccaggtggtctcgggtgaagacctcaacaattgccttgactctggggattcccag
caggtacaagggtacttaaaggatgccgggaatctcctaactagtgtcagtcggatcctg
aagggtgaaacagtccaatgggacctggataacacaagatgttgtcagtgtggaaaaatc
agaaataatgacgggaaaccagccgtaaagtcaccgcaaatgtccagcaatgattctgta
aagactgtagaaaaggattatttaaagtcagagaaaagtgcaggtgaaagtgtgtctgag
agtaattttcatcctgtgaaacctggttgtaatttggattcgaagggctggaatcagaac
ggtagagaaggttctgattcacgtctgaaggatcaagaagatgcagactccgatgtcaca
gatgacgatgacaatgattcgagttcgcttttacatcattcccacaatgcagggcaattc
catgattcccctgaaggtcagaatccagaggaaatagccgatcatggggggaattttgag
gaggacggatttggatcagatgatgacttcaatgacaacgtgttgcaggagattgatgag
gctgagcggagttttaactgcaacaagaacattgaagagacagatggagatgaagatcca
gagaattgccccagtgatcctaaatacttggaggttctgaagcagtactttggatattcc
aagttccgaccgatgcagtggaaaatcatcaactcagtcctcaatgacaagagagacagc
tgtgttgttatggcaacaggttatggtaaaagtctgtgttaccagtacccctcagtgttc
acaaagagaacaacagtggttatctcccctttgatctccctgatgcaggaccaagtcatg
ggcctcaaggctgcaaacatagaggcctgcttccttggatcggcccaggaaaattccacg
caagtttgtcatgacctgaaaaggggtaaatacagggttttgtacatcacaccggaatat
gcttcaggtgcaggagtgacccatctcaaagagattgacaaggaggttggccttgacctg
atagctatagatgaggctcactgtgtatcacagtggggtcatgacttccgctcggcctac
aggtctctgggtcaactcaaacaatcatttccccaggtcccggtccttgccctaacggcg
acggctacacacgaggtgcgacttgacatctgtaggagtctgaggctgaggaaccccagc
atcatttgtacagggtttgaccggccgaatctgtttctctcggtcagtctcaagtctgac
acttcctcagacctacgttctcaaatgaccaagcaggggaaccagtttaactttgatgga
cccaccatcatctactgccccaccaaaaaagccacgaatgaggtggcagccatagtcaaa
ggtatgaacatacccagtgccccataccatgcaggtctgtctcaggcggacagaaaccag
gcccacaggcagttcgtcaatgaccaagttcaggtcataatagcaacagtggcatttgga
atgggcattgacaaaccagatgtcaggaaagtgattcactatggagcccctaaggacatt
gagtcatattatcaggaagtgggtcgcgccgggcgagacgggatgcccagtcagtgtcat
gtcttctacgcagagaaggatttcctcacatcacgacattttataaatgaaatgcagaat
gagaaattccgagaacacaagatgaagatgcttgggaagatgcagcaatacctgaagacg
tctacctgtagacgcaggctactgctctctcattttgaaaacaaaaagttggatgacttg
ggaggaacaacaaactgctgtgacaactgtcgaagaaaacttgagagaagcagacagcag
agctattacgactccaaaaactggtcctctgtcctgccacctggtatcggccctgaggat
ggtgagcaggactttgctaaagaggcccaggatttgtttgatgcgatacagactctaggc
agtagatttggactagctactgttgtcctttttctgagtggatctcattctcagagagtc
agccgattcaccaatctctctgggttcggcaaaggaaagtacagaaaacctaattggtgg
aaagggtttggtaaagccctgatctatgaaggttatctgaaggaagtagcagtgaaggac
agctttggatccacagtggagctgtccaggaaggggatcagctggaagggggcggggaat
tcctccctcaagatgacccccacctcagacatgctggcagaaaccaggccacctgtagct
gtggctgtaaggcctgcagcctatgctgctccaacaagaagctacagtgggccagcgtca
acttctgattggtcaaccaaaccaaaggaaacagccaagatcccatcaccacggaaacca
gaagtggatgaaaaaactagaaaaatgcaggctgacctgtactctaagctggtgaaagag
aggaatgacctagctcaggagactggctacaccccccactccatcgccagtaacaaggtt
ctgttggacctggccaagatcagaccgagcagtaaggagaacctgttgagactggaggat
ttcccacaggctaaggtggagaagtttggtcccatgtttgtcaagattctcacggactac
tgccatcaaaacgaggctaaaatggatgaattcccagaaatcaaactacaaaagagcaat
gatgatctacagagggagctgtgtcgtcttacagaaacacagagaaccacatatgttatg
ttctgtctggaaaacaagtctctggaagaagtggcatccctgcgagggctgaaaactacg
acagtagtcagtcacttgtgtgaagcgatcaagaatggactagaggtggatccagttagg
gtgggtgttacaccccagatcgatagtctcatcaccaaggtcataagaggcccaacaatt
atgtctgtgataagtaaactgaccccaattaaagaccagttacccgactacattgaatac
aaccagatcaaagtggttatagctggtctggtccagaagtatgggcaagtgttaaaggag
actggggactatatggtggaccaacccacaactcaggatttgacagaggagggaattgta
gacggtggcaatgcggttggatcgcagtcaagccaaagcttctcccaatcagaaacagta
ggcggtcagaaaagaaagttaccctcctggatgaatggaaaaagtaagcctgtgatgtcc
aaaaagatgcgatctaacagtctatttaaatag
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