Crassostrea virginica (eastern oyster): 111115356
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Entry
111115356 CDS
T09197
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
Organism
cvn
Crassostrea virginica (eastern oyster)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-C3HC4
BRCT_2
zf-C3HC4_4
zf-C3HC4_2
zf-RING_2
zf-Nse
zf-RING_UBOX
zf-RING_10
zf-C3HC4_3
RTT107_BRCT_5
zf-RING_6
zf-rbx1
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
111115356
NCBI-ProteinID:
XP_022309767
UniProt:
A0A8B8C274
LinkDB
All DBs
Position
9:complement(65575879..65591870)
Genome browser
AA seq
2395 aa
AA seq
DB search
MDSKTKSLKDVLGSMQTTLQCSICLDLLQNPVSTKCDHHYCRFCITEFLRTQASVPCPLC
KCSITKRSLKDRPQLSSIVDNVRLLLEAFSKDTENKNSPSCGPSALSNPPPCSPEESKER
ETRGTKRKQPGSDTKVIATKSTGRRRNVRQGKRKTTEIIEIEDSSEEIDIRKDVTQCEER
DDQETNPANNLLHLGTSLNGVEESDCVELSPKVKEANLGLMEYPETATRQKGRGNLKSSE
KTGRLSDQNIFSNLLGELECETLKAGDEKDVIENFQDAETCEEGDGGQGHSVAYSSPSHL
TKMIEDDDVQLINKKDTKGVSKVKAWLCSNPVGVKERSHGSSAEEKEEVTEDCGRDTVTN
TIQSVQNQENGGKDDDSEIHHVFTEHGNSLQEITQICKRDRESNGTNSKCDSGGHKFFKS
TRNNHHAETSVRQEKGKYIFQKTSEMSGNRVSSITKSVPCKGRKLAKRKTKPVCKLREID
MNIMGSDSDPYEFKSSGTSPVQPKAKRIRLMEGKGKEGQINVTVQCMLKKKSGKSILKQV
AGNRMGKGEGVKEGGGSNTKKLSPKVLKRQMEEEQALMEMRDKINQAEDYDLLTSTQEVL
DHMNKEGVGKNGSRKFVSFNQDVVFFGSQNQSTVKCLKEGKESDAMRTVCGNREEKNLDV
PVTNAVKEADEGLKMKKTADLTVLGEMSCEKESWVTRKIERLQNKSEENGLIDDITTLES
AISENEADDIETMSSSTTDLDIQPDDSEFETLNIDIQPDAVIEILNSQDLIPNNSNKNGR
IKVPIIENEIIPDSEEHETFLKPKNRRISIIQKTKKPQELLSDRTEGNSKINVPKERMSK
NMEPLSHEVLSRNTDDGEEEDLLYSEKNQDHLLSMEVVPAMDECTEKNDEEVDSGKVVPV
MDEQIGSVKVVPETPLLTVDSELCMMGSDLSSKNKTLCKNNRLKRSSQKRTAKEGRDNAS
CDLTQKEVCESEVCYTKGSECSETIVPPSWNEEISKKGLNSKQSSDSSATTYLSSETQES
ELSCKRRRKKSYKCPPVRNSSLNDVNEILETPTSEQFDAIGDTCIATESESKKVTKASVK
LPPDESQQSLSSLSNTQESVLLLAPVHKPSNWTGRKPSLSSKDQHTSELSSSDVGGESSR
KQAQVFEEISSSCEIVSTGEFVEKESRVNRKTEKGTVNKQPGRKCFSLSPEKGQRVYVSA
EEQREGYGSETIKENAEQRPSAESTEKELKVQELPGNKEEEESRTKHEGAGMVNEEVLLM
NTPLDAMVPTQLSLRSIKKKELRAQRKQPQNSPEDVFLIDSEMTDTDSCQNLMENQEGVL
DLDLGETADCCDEDDGVEKSCGGKAEISSDGKSQMEGAESAPDGNNVADMGKNERGYSEN
THQENLQSRGEKTDLQTESTKERTSLDLEQGTKFLGLSGGEVIKTGKRPVRGLARKLKQK
NKLNVDPTNNQKSREELEDGDIGGIATVTMSEESDCKKDRITSEEASLADGRNQAHIKEK
KNDFPEKIKETGFKNVVPETVEDDGEEVEKMECEVLAIPETVEEVEDFGGQLDDENPVIP
KTLGGKFVDNETRNHENKDDFSDENKSDVKSVEENVTCIEESFVQDLSTDSSHSQKHVPE
TSSKKEKDKPRSDEQEEKASNGEVEEIVEENLEQSQTVREDGYMATGADDEPLFHSPESS
PLPDILEVDYDLELQSPPAKQRHVQMTRDEKEDERNDENDSDTSSDFVLLSDDEDNVAEP
PDQRKTKSCHRTDKDDNYSDTSSTFELLSEDAETAPSHQEEEEEEEEEDLIIRKRRSQRN
VIVSDDEDVVEKKKTRKPVIESDDEVVESKKTKKPVIVSDDEEEDNERAKDSLFTDDEDF
DLSQESVSSRHTNLSSSAISSQSEGLNTQNQAILRQELARMKKEMEEIESRIRKGNKSCE
MKMTSQKPASPKSSPEVEDVVEEPYSQYLKELQQEASDVDSPDNSQKSPSKMAEKAEICP
SDDNSDLDLSPLTPSPPPNDLCRGIDTELPEQFLETSNLIKHFQTSDDDKGCTGNKDEEM
EMETDCVDQSLETIDPCVIPESPGRVKNIVTCKSQRKDNSSIFRDPMIVQESPHSQRSAK
SSTEKLKDLYHSTPVSSGRKTQRARKNTLSFLSPVTAVPKSSPEGTWKMKAMSGGAELSP
FTQKSQKPHSFIASGLPLNQLNELRQLLKDNNLPLLSKFSSSTTHLIMRTEPLGSRMCDR
TLKFFQAVANSCWILDFAWVVDSLAAGRLLKEDSYEIIGDTVTNEKHCGPRKSRLRTPKD
PGLLNGMQFFVIGSSQGLVPDDLKALIVTCGGSVVTQAEQFEQGFQRFIITCVDFEDSEE
TVPNEDILKFNRLYKRYKAVTVTRDWLLNSLTYYALQPLEEYVLTTDKTLELPAF
NT seq
7188 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaagacgaagtccttaaaagatgtcctcggatccatgcagacaactttacag
tgttccatttgcttagatttactgcaaaatccagtatcaaccaaatgcgatcaccattac
tgcagattttgcatcacagagttcttaaggacccaagcctctgtgccttgtcctctgtgt
aaatgttcaatcacaaaacggagcctgaaagacaggccgcaattatcaagtatcgtggat
aatgtccgattattgttggaggccttctcaaaggacacagaaaataaaaattctccctcg
tgtggcccctctgccttgtccaatcccccaccttgttccccagaagaatctaaagagaga
gagaccagaggtacaaaaaggaagcaacctggctcagatacaaaggtaattgctacaaag
agtacgggaaggagaagaaatgtccgtcaaggcaagaggaaaacaacagaaatcatagaa
atcgaggattctagtgaggaaattgacatcagaaaagacgtaacacagtgtgaggagagg
gacgatcaagaaacaaatcccgcaaacaacttgttacatttgggaaccagtttaaatggt
gttgaagaatcggactgtgttgaattgtcaccaaaagtcaaggaggccaatttagggtta
atggaatatccagagactgcaactagacagaaaggaagggggaatctaaaatcgagtgag
aaaacaggaaggttatcggaccaaaacatattttctaatctgttaggagaattggagtgt
gaaacattaaaagctggtgatgaaaaggatgttatagaaaactttcaggatgcagaaact
tgtgaagaaggagatggaggtcaaggtcattctgtggcttactcctcgccttctcattta
acgaagatgattgaagacgacgatgtgcagttaattaacaagaaagataccaagggggtt
tccaaggtgaaagcatggttatgcagtaaccctgtgggagtaaaagagagaagtcatggg
tcaagtgcagaagagaaagaggaagttacagaggattgtgggagagatacagttacaaat
acaattcaatctgtccaaaatcaggaaaatggagggaaagatgatgatagtgaaatacat
catgtatttacagaacatggaaattcattgcaagaaatcacccagatatgtaaaagagac
agggaaagtaatgggactaattcaaaatgtgatagtggagggcataaatttttcaagtca
accagaaacaaccaccatgctgaaacatctgttagacaggagaaaggaaagtacatcttc
cagaaaacatcagaaatgtcgggcaatagagtgtcctctattactaaatccgttccatgt
aaaggaagaaaactggctaagaggaagaccaaaccggtttgcaagctcagagagatcgat
atgaacattatgggtagtgatagtgatccgtacgagtttaaatccagcgggacctcacct
gtgcagcctaaagccaagagaatcaggctaatggagggcaagggtaaagaaggtcagatc
aatgtcaccgtccaatgcatgctgaagaaaaagagcgggaaatcgattctaaaacaggtt
gcagggaataggatggggaaaggggagggagtgaaagaagggggtgggagtaacacaaaa
aaattatcccctaaagttcttaagagacagatggaggaagaacaggccttgatggagatg
agggacaaaatcaatcaagcggaagactatgaccttttgacctcaacacaggaagtgttg
gatcacatgaataaagagggagtgggaaagaatggcagtagaaaatttgtgtcatttaac
caggatgttgtgttttttggaagtcaaaatcaaagtactgtcaagtgcttgaaagaaggc
aaagaatctgatgcaatgagaacagtttgtggcaatagggaagaaaagaatcttgatgta
ccagtcaccaatgctgtgaaagaagcagatgaaggtctaaagatgaaaaagacagcagac
ctgactgtgttgggagaaatgtcttgcgagaaggagtcttgggtcactcgtaagatagag
agattacagaacaagtcagaagagaacggactgattgatgatataaccacattggagagt
gcaatatctgaaaatgaagctgatgacattgaaaccatgtcctcctccacaacagacctt
gacattcaaccagatgactcagaatttgaaactctgaacatagatattcagcctgatgcc
gtaatagagatcctgaactctcaagaccttattccaaacaattctaataaaaacggtaga
atcaaagtaccaatcattgaaaatgagatcattccagacagcgaagaacatgaaacattt
ctaaagccaaaaaataggagaatcagcataattcagaaaaccaaaaaaccacaggagtta
ttgagtgatagaacagaaggtaattcaaagattaatgtcccaaaggagagaatgagtaag
aatatggagccattatcacatgaagttctgtcaagaaacacagatgatggtgaagaggaa
gacttattgtatagcgaaaagaatcaagaccacttactctcaatggaggtagttccagcc
atggatgaatgcacagaaaagaatgacgaagaagtagactcagggaaagtagttccagtc
atggatgaacaaattggttcagtaaaagtagttccagaaactccattattaacagtggac
agtgaactgtgtatgatgggttcggacctttcttctaaaaataaaactttgtgtaagaat
aacagattaaagagaagttcccagaagaggacagctaaagaagggagggataatgcctct
tgtgatttgactcagaaggaagtttgtgaaagtgaagtatgttatacaaaagggagtgag
tgtagtgaaactattgtccctccatcttggaatgaagaaatatctaaaaaaggtttgaat
tccaagcagagttccgacagctctgctactacttatctgtccagtgaaacccaagaaagt
gaactctcctgtaaaaggaggcggaagaagagctacaaatgtccacctgtcaggaattct
agtttgaatgatgttaatgagattttggaaacgccaacctctgagcaatttgatgccatt
ggtgatacatgtatagcaacagaatctgagtctaaaaaggtaactaaagccagtgttaag
ctgccacctgatgagtcacaacagtctttgtccagtctaagtaatacgcaagagagtgtc
ttattattagctcctgtacataaacctagtaattggactggtagaaaacctagtctgtct
tctaaagaccagcacacttctgaattatcatccagtgatgttgggggagaaagctctaga
aaacaggctcaggtctttgaggagatatcgtcatcatgtgaaattgtttctactggggag
tttgttgaaaaagagagcagagtaaatagaaagacagagaaaggaactgttaataagcag
cctgggaggaagtgttttagtttaagtcctgaaaaaggccagagggtttatgtttcagca
gaagaacagagagaagggtatggaagtgaaactatcaaggagaatgctgaacagaggcct
agtgcagaatctacagagaaagagttgaaagttcaagagttgccaggcaacaaggaagaa
gaggagtcaaggaccaaacatgaaggtgctggaatggtaaatgaagaggtgctgttgatg
aatactcctcttgatgcaatggttcccactcagttgtccttgaggagcattaagaagaag
gaactgagagcgcagaggaagcagccacagaactctccagaggatgtgtttctgatcgat
tctgaaatgacggacaccgattcctgccagaacttgatggagaaccaggaaggtgtgctt
gatttggatctgggagaaacagcagactgttgtgatgaggatgatggcgtggagaaatct
tgtggcggaaaagcggaaatttcttctgatggaaagagtcagatggaaggagctgaatca
gcacctgatggaaacaatgttgcagatatgggcaagaatgaaagaggatattcagaaaac
actcatcaagaaaatttgcagagtaggggtgagaaaaccgatttgcagacagaatctaca
aaagaaaggacctccttggatcttgaacaggggacgaagtttctgggactctcaggaggt
gaggtcattaagacaggaaagcgcccagtccgagggttagccagaaagctgaaacagaag
aataaattgaatgtagatccaactaataatcaaaagagcagagaagaattggaagatggt
gacataggtggaatagcaactgttaccatgtctgaagaaagtgattgtaaaaaagacaga
attacatctgaggaagcttcattagcagatggtagaaatcaagctcatattaaagagaag
aagaatgattttccagagaaaatcaaagaaacagggtttaagaatgttgtaccagagact
gttgaagatgatggagaagaagttgagaagatggagtgtgaggtgcttgctattccggaa
actgtggaagaggtggaagattttggaggtcaactggatgatgagaacccagtcattcca
aagactttaggtggcaaatttgtagataatgagacaagaaatcatgaaaacaaagatgat
tttagtgatgaaaataagtcagatgtaaaatctgtagaagaaaatgtcacctgcattgaa
gaaagttttgtacaggatctctctaccgattcatcacactcccaaaaacatgttccagaa
acttcatcaaaaaaagaaaaggacaaaccaaggagtgatgagcaggaggaaaaggcaagt
aatggagaagttgaggaaattgtggaggaaaaccttgagcaatcccagactgtgagagag
gacggctacatggcaacaggagcagacgacgagcctctctttcattctccagagagttcc
ccacttcctgacattttggaagtagattatgatttggaactgcagagtccaccagcaaaa
cagaggcatgtccaaatgacgagagatgaaaaagaagatgaaaggaacgatgaaaatgac
agcgacaccagcagtgactttgtgttgttgtctgatgatgaggataatgttgctgaaccc
cctgatcagagaaaaaccaagtcctgtcatcgaacagataaagatgacaattacagtgac
acaagtagcacctttgaactactttcagaggatgctgaaactgctccatctcatcaagag
gaggaggaggaggaagaggaagaagatttaatcatcagaaagcgaaggtcgcagcgaaat
gttatagtatccgatgatgaagatgtcgttgaaaaaaagaaaaccagaaaacctgttatt
gaatcggatgatgaagttgttgaaagtaagaaaaccaaaaagcctgttattgtgtcagat
gacgaagaggaagataatgaaagagccaaggactcactctttactgatgatgaggatttt
gacctgtctcaagagagtgtgtccagtcgccataccaacctgtcctcttcagccatctcc
agtcagagtgaaggactgaacactcagaaccaagcaatactaagacaggaactagccaga
atgaagaaagaaatggaggagattgaatctcggattcgaaaaggaaacaagagttgtgaa
atgaaaatgacaagtcagaaaccagcgagtccaaaatcttcccctgaggtggaagatgtt
gtggaagagccttactcacagtacttaaaagaactgcagcaagaagcatcagatgtagat
tctccagataattctcagaaatcaccatccaaaatggccgaaaaagcagaaatttgtcca
tctgatgacaacagtgaccttgaccttagccctttaaccccctccccacctcccaatgat
ctttgccgtgggatagatactgaactcccagaacaatttttagaaacatcaaatctcata
aaacattttcagacaagtgatgatgataaaggttgtaccgggaacaaagatgaagagatg
gagatggaaacagattgtgtggaccaatcactagagaccattgatccatgtgtgataccg
gaatcccctggaagggtcaagaacattgtgacatgcaaatcccaaagaaaagacaactcc
agcatcttcagagatcccatgatcgtacaggaatctccacacagtcaaagatcagctaaa
tcttccacggaaaaactgaaggatctgtaccactccacccccgtgtccagcggcaggaaa
actcagcgggcgaggaaaaacacactgtcatttctgtctcctgttaccgcagtccccaag
agttcacctgaaggaacatggaagatgaaggcaatgtcaggtggagcggagttgtctccc
tttacacagaaatcacagaaaccacactcttttatagcatccggtctcccattgaatcag
ttgaatgaacttcgtcagctgttgaaagacaacaacctcccacttctttccaagttttct
tctagtactactcaccttattatgagaacagagcccctgggcagtaggatgtgtgataga
actctcaagtttttccaggctgtagccaatagctgctggatcctggactttgcgtgggtg
gtggacagcttggctgctgggaggctgctgaaggaggactcttatgagatcattggagat
actgtgaccaatgagaagcattgtgggccgaggaaatccagactccggactccgaaggat
ccaggcctcctgaatggaatgcagttctttgttattggatccagtcagggtcttgttcca
gatgacttgaaagccctgatagtgacttgtggaggatctgtggtcactcaggcagaacag
tttgagcagggctttcagcggttcatcatcacctgtgtcgactttgaggatagtgaagaa
actgttccaaatgaagacattttgaagtttaacaggctgtacaagagatacaaggcagtt
acagtgacgagagattggttgctgaattccctgacgtattatgccctacagccactggag
gaatatgttctgaccacagacaaaactctggaacttcccgccttttag
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integrated database retrieval system
