Crassostrea virginica (eastern oyster): 111116092
Help
Entry
111116092 CDS
T09197
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial-like
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn00280
Valine, leucine and isoleucine degradation
cvn00650
Butanoate metabolism
cvn01100
Metabolic pathways
cvn04146
Peroxisome
Module
cvn_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
111116092
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
111116092
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111116092
Enzymes [BR:
cvn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
111116092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
111116092
NCBI-ProteinID:
XP_022310795
EnsemblRapid:
LOC111116092
UniProt:
A0A8B8C5C4
LinkDB
All DBs
Position
1:complement(59691035..59699010)
Genome browser
AA seq
327 aa
AA seq
DB search
MASCFGRMFSFYKICLQQTRNCSTRFSTDLPTFVKIVEVGPRDGLQNEKTFVPTETKVEF
INKLSDAGLPVIEVTSFVSPKWVPQMADNAEILKSIKRRDGIIYSALTPNLKGFKDAVSY
GVDEVAIFGAASETFSKKNINCSISESLNRFEEVVQAAKEVQIPVRGYVSCVLGCPYEKN
VSPEKVAQVAKQMFDMGCYEISLGDTIGVGTPGAMKQLIAVVTKHVPIQNVAVHCHDTYG
QALANILAALQMGVSVVDSSTAGLGGCPYAKGASGNVATEDVLYMLDGLGIKSGVDLQKT
VEAGRFISQVLGRSTHSKVGQAMKSSL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctgttttggtcgaatgttttcattttataaaatttgtttacagcaaaccaga
aactgttccacgcgttttagcacagatttgccaacttttgttaagattgtcgaagttggt
cccagagatggattacaaaatgaaaagacatttgtgccaacagagaccaaagttgaattc
ataaacaagctttctgatgcagggctgcctgtaatagaagttacaagctttgtatctcca
aaatgggttccacagatggcagataatgcagagattctgaagtccatcaagagaagagat
ggcatcatctattcagctctcactccaaatctgaaaggattcaaagatgcagtttcctat
ggtgtcgatgaagtagcaatatttggagcagcatctgaaacattcagcaaaaaaaatatt
aactgcagtatttcagaaagtttaaacagatttgaggaagtcgtgcaagcagctaaagaa
gttcaaatacctgttagaggctatgtctcatgtgttttgggatgtccatatgaaaaaaat
gtctccccagaaaaagttgcacaggttgccaagcagatgtttgacatgggctgctacgag
atatctttaggtgacacgattggagtaggaaccccaggcgcaatgaaacagctgattgct
gtcgtaacaaaacatgtgcccatccaaaatgttgctgtccactgtcacgatacctatgga
caagcactagctaatattttagcagctttacagatgggtgtgtcagtggtggatagctca
acagcaggcctggggggatgtccatatgccaaaggagccagtggcaatgtggccactgaa
gacgtattgtacatgttggatggactaggaattaaatcgggagttgatcttcagaaaaca
gttgaagctggtcggtttatttcacaagtattgggacgaagtacacattctaaagtagga
caagccatgaagtcatcattataa
DBGET
integrated database retrieval system
