Crassostrea virginica (eastern oyster): 111116173
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Entry
111116173 CDS
T09197
Name
(RefSeq) ligand-gated ion channel 4-like
KO
K05312
nicotinic acetylcholine receptor, invertebrate
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvn04040
]
111116173
Ion channels [BR:
cvn04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
111116173
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
111116173
NCBI-ProteinID:
XP_022310880
UniProt:
A0A8B8C7U4
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Position
9:74706576..74730974
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AA seq
486 aa
AA seq
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MDNHSSMLNKRRFWSIRFLVCCFFKAFLLVSADENEFRLIRDVMSRYDKRIRPSSNHTLP
TTINFSVALAQIIDVDEKNQIITTNCWLNLNWMDNMLTWNPRKYGGINVVRLPYNDIWLP
DILLYDNADVGTAQSSVSTNVIVSANGNVTWLSMWIFKSSCSMDVRYFPFDVQNCSMNFA
SWTFDAYRVDIRNNAHDGDLSNYVNSSEFEVVEFSFKRHVVVFTCCPEPYVFLTYTLVIQ
RKPLFYLFNMVMPCILITLVALLGFYMPNDSGEKISMGITTLLSMTVFLMIVAEELPPVS
DIVPLIGLYYGMSIAVISLSTALNVFTLNVHHKGLRGHKVPHCLKRVFFGIVSKMLFLKI
DLPVAPEEGMEQVPSPRYIVYDSEPPPAINGSGSTFPTRQGHKPDTDDASQREFMRILHR
VNKTIDKNEQRLSEQDRRDVINQEWQQLALVIDRLLLVLFVVVVICSTLSLLVPGSDYSH
PVSKNE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggataaccattcatcaatgttaaacaaaagacgtttttggtccatcagatttttggtt
tgctgcttttttaaagcgttccttcttgtgagtgctgatgaaaacgagttccggttgata
cgagacgtgatgtccagatacgataaacggattcgtccctcatcgaaccacactttaccc
acgaccatcaacttcagtgtggcgctagcacagatcattgatgtggatgagaagaatcag
ataatcacgacaaattgttggctcaatctgaattggatggacaacatgttgacctggaat
ccacggaagtacggcggcatcaatgtggtccggctgccctataacgacatctggctacca
gacatcttgctttacgacaatgccgatgttgggacagcccaatcgtcagtcagcaccaac
gtcatcgtatccgccaacggaaatgtcacgtggttgtcaatgtggatatttaagagttcc
tgttcaatggatgtccgttactttccatttgacgtccaaaactgttcaatgaacttcgcg
tcatggacatttgacgcttaccgtgtcgacatcagaaacaacgcccatgatggcgatttg
tctaactatgttaacagttcagagttcgaggtcgtggagttcagctttaagcgtcacgtg
gttgtgttcacgtgttgtccggaaccttacgtgttcctgacttacaccctcgtaattcaa
cgcaagccgctgttctatctatttaacatggtgatgccgtgtatactgattacattggtg
gcactgctggggttctacatgccgaatgactcgggggagaagatctccatggggattacg
acgctcctctccatgaccgtgttcctgatgattgtggcggaggaactgccccctgtctcc
gacattgttcctctcatagggctatattacggtatgtctatcgccgtaatctcgctgtcg
accgctctcaatgttttcacccttaacgttcaccacaaagggctgcgcggccataaggtt
ccacactgtctcaaacgagtcttctttggaatcgtctcaaaaatgctgttcttaaagatc
gatttacccgttgctccagaagaaggaatggagcaagtaccctcacctcggtacatcgtg
tacgacagtgaaccacctcccgccataaacggaagcggaagtactttcccaacccgacaa
ggtcataagcctgacacggacgacgctagccagagagagttcatgcggattctacatcga
gttaacaaaactatcgataaaaacgaacagagattatcggaacaagacagacgtgacgtc
atcaatcaagaatggcaacagttagccctcgtcatagacagattgctcctagtgttattc
gtagtcgtagtcatatgttctactttatccttgttggttcccggaagtgattattcacat
ccggtatcaaagaatgaatga
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