Crassostrea virginica (eastern oyster): 111116220
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Entry
111116220 CDS
T09197
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111116220
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cvn03310
]
111116220
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111116220
Nuclear receptors [BR:
cvn03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
111116220
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111116220
NCBI-ProteinID:
XP_022310915
UniProt:
A0A8B8C5E2
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Position
1:complement(37683779..37690489)
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AA seq
531 aa
AA seq
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MSKRDISVGTDLDFEEDSLLGEPKRKKPVYPYIPKGTPLQLPPCRICGGKASGIHYGVNS
CEACKGFFRRYLLRKEPYKCNHGGNCVITNRHRGNCSACRMMKCLDLGMSKEGIRQGRYT
LTERTRAIMEVKRLQNPDSQFDQRNFDIVSIAVTQKNAEKTTKIIFEESTSCMQFPTSPD
CNRQQALSDVSDDRSLADRLLDFSSFSTHSVSDELTDLLNPDCFFSEDVEMSNAVNMLLL
DTAPPPPSTPSNTSSETEIKIDLYDDVIDNLVGALNDMLPHSSQYTDQELYAILKDGHDK
YHMKSEVFGPLNALSPDEYNSIYEKTQIDVDGRRQHLQFNKGTLEKMIKKYVNFSHAIPC
FSDLPAEDQATLLKASRFEFFMLLEYRSLNPDLEMIQTYSGEVFHLNEACIYVPREMMKS
WLEFSRTIRKLELTSKELAVTLAVALTFRDRCRLEQPSFLEQIQNNLVRMLYYLLEDHHG
DEFVMAFSRIISMLTGLRSLTENYFRQFKSICKDTLIKREMPELLGFLFDE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaagagacatcagtgtaggaacagacctcgacttcgaggaggattccttgctc
ggcgaaccgaagcggaagaagccagtgtacccgtatattccgaaaggcacgccattgcag
cttccgccctgtcggatctgcggggggaaggcgtcagggattcattacggagtcaacagc
tgtgaggcctgcaagggcttctttaggagatatctccttcgcaaagagccttacaaatgc
aatcatggaggtaactgcgtaattacaaaccgtcaccgtggcaactgttccgcttgccgg
atgatgaaatgtcttgacctaggaatgtcaaaagaaggtatacggcaaggcagatacaca
ctcacggaaagaacaagggcaatcatggaagtcaagcggttacagaacccagattctcag
tttgaccaacgaaacttcgatattgtcagtatagccgttactcagaaaaacgcagagaag
accaccaaaataatatttgaggaatcgacgtcatgtatgcagtttccgacttctccggac
tgcaacagacaacaagcattgtccgatgtatcggacgatcgatctctcgcagatcgatta
ttagatttttctagcttctctactcatagtgtatcggatgaactcacagatcttctcaat
ccggactgtttctttagtgaagatgtggaaatgtccaacgcggtcaacatgttgttgctg
gacacagcccctcctcctccttctactccctcaaatacgtcatcagaaacggagatcaaa
atagatttgtatgatgacgtcatagacaatttagtcggggcattaaacgacatgcttcca
cattctagccagtatacagatcaagaattgtatgccatactgaaagatggccacgacaag
taccatatgaaatcagaagtattcggtccattaaacgctttgtccccagatgagtacaac
tccatttatgagaaaacacagatagacgtggatggaagaaggcagcatttgcaatttaat
aaaggaaccctagaaaaaatgatcaagaaatatgtaaacttttctcacgccattccatgt
ttttcagaccttccagctgaagatcaggcaactcttcttaaagcgtccaggtttgagttc
ttcatgctgttggagtatcggtccttgaaccctgaccttgaaatgatacaaacttactct
ggagaagtgttccacttaaacgaagcatgtatttacgtaccccgtgaaatgatgaagtca
tggctcgagttttcccggactattcggaaactggaactcaccagcaaagaactagctgta
actctggcggttgcactaacattcagagaccggtgtaggttagagcagccatcattcttg
gagcaaattcagaataacttggtgcgcatgctctactacctactggaagatcaccatgga
gacgaattcgtcatggcattttcacgaattattagcatgttgacaggtttgcgaagcctg
acagaaaattacttccggcagttcaagtccatttgtaaagacacactcatcaagcgagaa
atgccagagctgcttggttttctgttcgatgaatga
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