Crassostrea virginica (eastern oyster): 111116294
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Entry
111116294 CDS
T09197
Name
(RefSeq) putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvn03036
]
111116294
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Gene silencing
Transposable elements
111116294
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
HTH_23
Sigma70_r4
HTH_IclR
HTH_Tnp_4
Motif
Other DBs
NCBI-GeneID:
111116294
NCBI-ProteinID:
XP_022310990
UniProt:
A0A8B8C5V9
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All DBs
Position
10:12115499..12116707
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AA seq
266 aa
AA seq
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LIKGHHSTSSNEINFTLQVLTTLRFLAKGDYLSEVADMHGISLSSASRIVHSVCSALCLS
LDNIKFPTAQQLNRIKDEFHAICNFPNVVGAIDGTLIPIQGMTSEEEPYFVCRKGFHAIN
VQAVVTADLRFTNVVVRWPGATHDAFILANSALPGIMEGVNGWLLGDSGYPLKKWLLTPF
AQPSNQHEERYNSSHCTTRNTVERAFGVLKSRFRCMHKTGGSLQFGTEKCVKIIECCFRL
HNKALSERVPLQGGSEVIPVFHNHGQ
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
ctaattaaaggacatcacagtactagttctaatgaaataaatttcacactacaggtgctg
acaacattacgatttctcgcaaagggggattatctttctgaagttgcagacatgcatggg
atttctttgtcctcagcatcaaggattgttcacagtgtttgttctgccctttgtctttcc
ttggacaacattaaatttccaactgcacagcaactcaacagaatcaaggatgagttccat
gcaatatgcaactttcctaatgttgttggagccattgatggcacattaatacctattcaa
ggaatgaccagtgaagaggaaccttatttcgtctgcagaaagggtttccatgccattaat
gtacaggcagtggtgactgcagatctcaggtttacaaatgttgtggtgagatggccagga
gctacacatgacgccttcatcctagctaattcagctttaccaggcatcatggagggagtg
aatggatggttattaggagattccggttatccattgaagaaatggcttcttaccccattt
gctcagccctcaaaccagcatgaagagcgttataactcctcccactgcacaaccagaaac
actgtggagagagcttttggggttcttaagagcagatttagatgcatgcacaaaacagga
ggcagtctccagtttggcacagaaaaatgtgtcaagatcatagagtgctgcttcagactc
cacaacaaggctctgagtgagagagtgcccctacaaggtggaagtgaagtgatccctgtt
ttccacaaccatggacagtaa
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