Crassostrea virginica (eastern oyster): 111117599
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Entry
111117599 CDS
T09197
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvn04054
]
111117599
Pattern recognition receptors [BR:
cvn04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111117599
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR_2
TIR
LRR_NXF1-5
LRR_LRWD1
LRR_6
Motif
Other DBs
NCBI-GeneID:
111117599
NCBI-ProteinID:
XP_022312461
UniProt:
A0A8B8CCT1
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Position
10:complement(18376275..18400392)
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AA seq
838 aa
AA seq
DB search
MTEEITFFFLLVAGLAKVSFALSCSSELRCKCSYVNNMLTADCNHLHLKKPPIFNKDVRR
IDLSNNHFFEIPINMPSDIIFLNLENNKIKYPQKSTLAQYKHLKVLRLNDNCLWEGLKIW
PSRFFENLTKLEFLSIRDNCPGIDEIHMMYPHEGFYGLSSLKNIEVNGLGQGNFGDAFEK
NNSIEILRIPEESACQIHNIKKDTLSVFKKATNITLFNCHFKYIEKGAFATLTELVYLDI
TKNTDLSLSVLSNITYDLRNSKIKTLVANKLQCSNGLSLVLKIKHLINLQNTTLTELSLA
GNTIALIEHKLMTYLPKSLTYLNVEDNVFIFGMYLYEGDFLSNLERLDIRHAGYYRPDYE
ISCNYNSDNCDQNEETPHTTQSEVATSSQNQTYQIPPKLKYLNIANQRISFPTDLKHGVR
ISSRNSLTHLYASGNIFDYIPSFVLSGLQHLQHADLSNNFCSNITRESFRDLNMLSLLNL
SRNLLGGILKNQGSSDLFKFLPKLKILDLSNNLITYMPEKLFSFTKNIAILNLSNNEIET
ISFDLTSALELQEIDLSFNKIMKLDLDSMQKLEARRKIPLAINMANNSFTCNCKSLDFLR
WIKESSNKQFLYIDTYECSFENGTNTLLKELEQIIASLEQDCRSYTTTVVIACILFTLTV
FVVCLGIGYRYRWELRYIYYAGKRWLSAKDDRLLEIGGKYHFDVFVSYAESERQMFIPNL
RLLEENLDLRFCIHSRDFMPGVTIHENITNAIHYSKQTVCFVSKAFLKSEYCMYELQMAK
MEGITRGTEDALLIVLVDGDIEDLHRVVNTNRVYLEYNKDHPEEFWNAFEHALKEMSS
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagaaataacattcttcttccttcttgttgcgggattggcaaaggtttccttt
gcattgtcgtgctcatcagagttgagatgcaaatgttcttacgtcaataacatgttaaca
gccgactgtaaccatttacatttgaaaaaacctccgatttttaacaaggatgttcgtcga
attgatctctctaacaaccatttctttgaaattcctataaacatgccttcagatataata
tttctcaatcttgaaaacaacaaaataaaatatccgcaaaagtcaacacttgcacaatac
aaacacttgaaagtgttacgtttaaatgacaattgcttgtgggaaggactgaaaatttgg
ccgtcaagattttttgaaaaccttactaagttggaatttttgtctataagagacaactgt
cccggtattgatgaaattcatatgatgtatcctcatgaaggattttatggactatcgtca
ttgaaaaacattgaagtaaatggattaggacaaggaaactttggggatgcgtttgaaaag
aataactctattgaaattctgagaattccagaagaaagtgcctgtcagatacataacatt
aaaaaagatacactgagtgtatttaaaaaagcaacaaatattacgttgtttaattgtcat
ttcaagtatattgaaaagggagcctttgcaactttaactgaactggtgtacctagatatt
accaaaaacaccgacctatcgttatctgtgctctcaaatattacttatgatttaagaaat
tcaaaaattaagactttagttgccaacaaacttcagtgctcaaatggactttcactcgtc
ttaaaaatcaaacacctaatcaatcttcaaaatacaacattaacagaactatcccttgca
ggaaatacgattgctttaattgagcataaattaatgacttacttgccaaaatcactgaca
tacttaaatgtcgaagataatgtgttcattttcggcatgtatctttatgagggcgacttt
ttatcaaaccttgaaagacttgatattaggcatgctggttattacaggcctgattatgaa
ataagttgtaattacaattcagacaattgtgaccagaacgaagaaacgccacatacaaca
caaagtgaagttgctactagtagccaaaatcaaacgtatcagatcccaccaaaacttaag
tatcttaacattgccaaccagcggataagttttccgactgatttaaagcatggtgttagg
ataagttcaagaaattccctgacccacctttatgcaagtggaaatatctttgattatata
ccaagttttgttttatctggactacagcatttacagcatgcggatctgtcgaataatttt
tgttcaaatattaccagagaatcgtttcgagatttgaatatgctttccttgctaaattta
tccagaaatctccttggtggaatattgaagaaccaaggatcgtctgacttgtttaaattt
cttcccaaactaaaaatcttggatctctcaaacaacttaataacatacatgcctgagaaa
ttgtttagttttacgaagaacattgcgatattaaacttgagcaataatgaaattgagaca
atttcatttgacctaacttcagccttggagctacaagagatagatctgtcattcaataaa
ataatgaagctcgatttagattcaatgcagaaactagaagcccggagaaagattccctta
gctataaatatggctaataattcttttacgtgtaattgtaaaagtttggatttccttcga
tggattaaggagtcaagtaataaacagttcctgtacatagatacatatgagtgttctttt
gaaaatggcacaaacacccttcttaaagaacttgaacaaatcatcgcctctttagagcag
gactgtagatcatacacaacaacggttgttattgcttgtattctttttactcttactgtt
tttgtagtctgtttaggtattggatacagatatagatgggaattgagatatatatattat
gccggaaaacgatggctttctgcaaaagatgatagattgttggagatcggaggaaaatat
cattttgatgtttttgtatcttatgctgaaagcgagagacaaatgttcattccaaatctg
agattgttggaagagaatttggaccttagattttgcattcatagtcgagacttcatgcca
ggggttacgatacacgaaaacatcacaaacgctattcactatagtaagcagaccgtgtgt
ttcgttagtaaggctttcctgaaatcagaatattgcatgtacgaacttcagatggctaaa
atggaaggcataactcgtggaacagaagacgccctcctgattgtgcttgttgatggagac
attgaagacttgcatcgtgtagtgaataccaacagggtgtaccttgagtacaataaagac
catccggaagagttctggaatgcatttgaacatgcattaaaggaaatgtcctcttga
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