Crassostrea virginica (eastern oyster): 111117650
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Entry
111117650 CDS
T09197
Name
(RefSeq) GA-binding protein subunit beta-1-like isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111117650
03029 Mitochondrial biogenesis [BR:
cvn03029
]
111117650
Transcription factors [BR:
cvn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
111117650
Mitochondrial biogenesis [BR:
cvn03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
111117650
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
CCDC84
UPF0242
Motif
Other DBs
NCBI-GeneID:
111117650
NCBI-ProteinID:
XP_022312515
UniProt:
A0A8B8C9T7
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Position
10:complement(10162193..10172248)
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AA seq
523 aa
AA seq
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MSGALTEEGLDPGLVISTVEEQIIEDQQAAKEIILCPEIQFVQQKSQPAKEKDIVIFPKS
RQYYAKMSLVDLGKRLLEAAKRGETDDVRTLMSNGAPFTTDWLGTSPLHFAAQYGHLETA
EVLLRAGISRDARTKVDRTPLHVASQEGHSDIVDLLVQHAADVDAKDMLKMTPLHWATEK
GHAHVMEALIKHGADTSCENKFDRTPLDIAIGNGRADLVQILQLAQHTHIGSMGDDETVT
IETTEVDPDNVEETVTVSSDLEGNKHDGQDQSNSSVLATLAALAEATAPNSSTQVTTANT
DAMSWLESQGITMITTTEGGIISSAMESGQSIALTEAGKIALTNIIKQQGLSAGTLISQD
GVLTEVTDDTVVSQESSLLGAGEVMEGEVEQGLVDGEEGQKVITIVAASGLDQDQEGLGE
VMTSEGLVMESGDAPDEHLENSDEPPLKKMKSEVLEDDASIYTNPIEKDTEEDVDLDKES
LRRQLEEMQRQAEAYKLQLQQKEQEAAAYKKKLDESIVTSEEA
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggcactgacggaagaggggctggacccggggcttgtcatctcgaccgtcgag
gaacaaatcatagaggatcagcaggccgccaaggaaatcatcctgtgtcccgagatacag
tttgtgcagcagaaatctcagccagccaaagagaaagacattgtaattttcccaaagtca
cgacagtattacgccaagatgtctctggtagatctaggaaagcgtctcctggaggcagca
aagcgcggagagacggatgacgtccgaacactcatgtcaaatggggcacccttcaccact
gactggctgggaacgtccccactccattttgcggcccagtacggtcacctggagacggcg
gaggtcctcctccgcgcggggatcagtcgggacgcccgcaccaaggtggacaggacaccc
ctccatgtggcctcacaggaaggacactcagacatagtggacctcctggtacagcacgcc
gcagacgtagacgcaaaggacatgttaaaaatgacgcctctacactgggcgacggagaag
ggacacgcccacgtaatggaggccttgatcaagcatggagctgacacctcatgtgaaaac
aagtttgacagaacccccctggacatcgctattggtaacgggcgggccgacctggtacag
atcctgcagctagcccagcatactcacataggaagtatgggggatgatgaaactgttacc
atagaaaccacagaagttgaccctgataatgtagaggagacagtgactgtgtcatcagac
ttggaagggaacaaacatgatggacaggatcagtcaaattcatctgtgctagcaacactg
gcagcactagctgaggccacagctcccaactccagcacacaggtgacgacagccaacaca
gatgccatgtcatggttagagagtcaaggtatcacgatgattaccaccaccgaaggagga
atcatatcctccgccatggagagtgggcagtccatagcactgacagaggcgggtaagata
gcgctgaccaacataatcaagcagcaggggctctccgcggggaccctcatctctcaggac
ggggtgctgacagaggtgacagacgacacagtggtcagccaggagtcgtctctcctcggg
gcaggggaggtgatggagggggaggttgagcaggggctggttgacggagaggagggacag
aaggtgatcaccattgtggcggcctcggggctggatcaggaccaggaggggctgggagag
gtcatgacctccgagggcctggtgatggagtctggggacgcccccgatgaacatctagag
aactcggatgaacctccactgaagaaaatgaaatcagaggttctggaggatgatgccagc
atctataccaaccctatagagaaagacactgaagaggatgttgacctagacaaggagagc
ctgcggcgacagctggaggagatgcagcggcaggcggaggcctacaaactgcagctccag
cagaaggaacaggaagccgccgcgtacaaaaagaagctggacgagagcatcgtcacctct
gaggaggcctag
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