KEGG   Crassostrea virginica (eastern oyster): 111117916
Entry
111117916         CDS       T09197                                 
Name
(RefSeq) toll-like receptor 13
  KO
K18808  toll-like receptor 13
Organism
cvn  Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:cvn04054]
    111117916
Pattern recognition receptors [BR:cvn04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   111117916
SSDB
Motif
Pfam: LRR_8 TIR TIR_2 LRR_4 LRR_At5g56370 DHU1_N ThsB_TIR
Other DBs
NCBI-GeneID: 111117916
NCBI-ProteinID: XP_022312857
UniProt: A0A8B8CAR7
LinkDB
Position
2:complement(54997521..55000613)
AA seq 703 aa
MSGGCSVLWCALLLTLVSTERCGDGHCKCSRARKTATCTSKKRTLNYFPVLPTYVKQLRY
NDNYLPRLSRGRLVNLTKIPLEQLSFDDDGIIRVDRDAFVDLKHLIKLQISRNSILNVSV
VADTLQQVSRSIEKLVLVHNKWASIPPNMFDGLQGSNISLIDLSFNNLISFNGTQLLKRI
PRVKSLFLDQNPISQNGLEFTNMKELFKLSLQNTYLPVVPGFCDEFGRSSLPRLRSLYLD
HTSIKSVSEKDFSCLPYLWKLSLSFTDLSAIHNNTFARLPVLKILILQNLVRLRRLDYLA
LNSSSLDKFQFGSSNFKFDNKGRYNNDLFKFASNITDLELFNNEISDGTTLKTLVWHLVR
LKILNLQGCGLNYLQRGTFDRMPDLRKIILKGNNLNGWDPAMFSKLSNLRKLYLSGNNIA
VVNRSSLDFINKTSLRLIDLSNNPFSCSCQQLWFRDWLKATKDLEVPSYPQRYVCRSPPE
WDKTRLASFNYTQEDCREKNPWILIGSLLGSTVFLCTLAVVIVYRHLPTIRNVIYLLRLR
RKGYVKLVNSSEYDFDCYIVSCEMDEAWVFNTLSPTLEEEHFYRLCVPSRDFDLGANIAD
QIEEKMQDSKKIIVVMSNDFAQDEWCQFQLEKAQERIRLQGTEVAVLIMLRDIDNKHMTS
TIKDLLHKSSYATWVKGKIVTQLFWDIVLAAIEKPFGNPPIAV
NT seq 2112 nt   +upstreamnt  +downstreamnt
atgagtgggggatgttctgttctgtggtgcgcccttctgctgaccctggttagtaccgag
agatgtggagatggacattgcaagtgttcgcgggctcgtaaaacggccacatgtacatcc
aaaaagagaactttaaactactttcccgttctgcctacttacgtcaagcagttaaggtac
aacgacaattacctcccgcgtctaagccgaggccggctggtcaacctgaccaagatacct
ctagagcagctctcttttgacgatgacggaatcatcagagtggaccgggatgccttcgtg
gatttgaaacaccttatcaagcttcagatttcccgtaacagtattctgaatgtatcagtt
gtcgccgataccctacagcaagtaagtcgttcgatcgagaagctggttttggtgcacaac
aaatgggcgtcgattcctcccaatatgtttgacggacttcaaggttcaaacatttcgttg
attgacttgtcttttaacaatttaatttcgtttaatggcacgcagcttttaaaacggatt
ccacgtgtcaaatccctcttcctagatcaaaatccgatatcgcaaaatggactagaattc
actaacatgaaggaactgtttaaattaagtttacaaaatacctatttgccagtagttcct
ggattttgtgatgaatttggcagaagcagcctgcctcggttgcgttctctatacctagac
catacttcgatcaaatcagtctcggagaaggatttcagctgtctaccctacctttggaaa
ttgtcactgtcatttacagatctgagtgcaatacataacaacacattcgctaggttgcct
gtgctgaaaatacttattttacaaaacctcgtcagactcagacgtttagactatctcgct
ctcaattcttcgtcattagacaagttccaatttggttccagcaacttcaaatttgataat
aaaggcagatataataatgatttatttaagtttgcgtcgaatattacagatctcgaactt
tttaacaatgaaatttcggatggtacaacgctaaaaacgcttgtatggcacttggtaaga
ctgaaaatattgaatcttcagggatgtggacttaattaccttcagcgcggaacgtttgat
agaatgccagatctgcgtaaaatcattttgaaaggaaataacttgaacgggtgggatcca
gccatgtttagtaaactttcaaatctgagaaagctctatctatctggtaataatatagct
gttgtcaatcgcagctcccttgattttattaacaaaactagcctccgactgattgattta
tcaaacaacccgttttcctgttcctgccagcagctttggtttcgtgactggttaaaggcc
accaaagacctagaggtgccgtcctatcctcagagatatgtctgtcgatctcctccagaa
tgggacaaaacgagactggcttcgtttaattacacccaggaagactgccgcgaaaagaat
ccctggatcttgatcggctccttgctgggatccaccgttttcttgtgcacgctggccgtc
gtcatagtgtacagacacctgccaaccatcagaaacgtgatatacctgctccggttacgc
cggaaaggctacgtgaagttggtaaattcgtccgagtacgattttgattgttatattgtg
agctgtgaaatggatgaggcgtgggtgttcaatactctgtcgcctacgcttgaggaggaa
cacttctaccgtctttgtgtaccatcaagagattttgacctcggtgcaaacatagctgat
cagatcgaagaaaaaatgcaggatagcaaaaaaatcattgtcgtgatgtcaaatgatttt
gctcaagacgaatggtgtcagtttcagttggagaaagcacaagagcggatccggcttcaa
ggaacggaagtggcggtgcttatcatgttgcgagatattgacaacaaacatatgacgtca
accatcaaagatctcttacacaagagctcttatgcaacatgggtgaaaggcaaaatcgtc
actcagctattttgggacattgttttggcagcaattgaaaaaccatttggaaaccctccg
attgctgtttaa

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