Crassostrea virginica (eastern oyster): 111118092
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Entry
111118092 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: interferon regulatory factor 1-like
KO
K09444
interferon regulatory factor 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111118092
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
111118092
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GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
111118092
NCBI-ProteinID:
XP_022313100
UniProt:
A0A8B8CBQ2
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Position
2:complement(33427503..33431127)
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AA seq
389 aa
AA seq
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MVQRKTNLPVIPQRKPIRPIERQKMRPWLVNLLNNERITGFSWVSKDHETFRISWRHAAR
QGWDPEVDAGLFERWAKHTGKYVDGDEPDPKRWKANFRCALNSLPDVKQLKDQGQRKGKD
AYKVYQFLNERKSHQKHKATERTTVPKVTQTKTKRNLRARNAKKSYAKMMAMDSEGEEEE
EESSSDFIMSESDCSTSAGNQTPERMEEEEEEEEESSDSDPCFEESLETRLPDFNKICKS
TDLTALQKFLPSEKDLRTSISCSGPVTNLPYPFMPTASDPLSKQMNQGLTDAASTTSSTI
TEDELYQLVLEAEVHDQAPEGNYSDLWGSGLPIPQEVHVDAIIEDSDATYFILDNVENEV
VIQDTPNVRCEQITDGEVLQYTGLNLSQL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagagaaaaacaaatctacccgtcattcctcaaaggaaacccataaggcccatt
gagcgccagaaaatgaggccgtggttggtcaatctccttaacaacgagaggatcactggg
ttttcctgggtatccaaggaccacgagacgttccggatatcttggagacacgccgcccgc
cagggctgggacccagaagtggacgctggtctctttgaacgctgggctaaacacactgga
aagtatgttgatggtgacgagcccgaccccaagagatggaaagccaacttccggtgtgct
ttgaacagccttcccgatgtcaaacaattaaaggaccagggacagaggaagggcaaggac
gcttacaaggtgtaccagtttctgaacgagaggaaaagtcatcagaagcacaaagcaaca
gagcggacaactgttccaaaggtaactcagaccaaaactaagaggaatttgagagcccgc
aatgctaagaaatcttatgctaagatgatggccatggacagcgaaggggaggaggaggaa
gaggagtcttcctcagacttcatcatgtcggagtccgactgctccacgtcagcagggaac
cagactcctgaacggatggaagaggaggaggaggaggaggaagagtcgtcggacagtgac
ccgtgttttgaagagagtttagaaacacggctccccgacttcaacaagatttgtaaatct
acagacctaacggcccttcagaagttcctgccttcagagaaggacctccggaccagtatc
tcgtgttccggtcccgtaacaaacctcccctacccattcatgcccactgcatccgaccct
ctgtcaaagcaaatgaaccaagggttaacagacgccgcgtccaccacaagtagcaccatc
acagaggatgaactttatcagctggttctggaggccgaggtccatgaccaggccccagag
ggcaactattcagacctgtggggcagcggcctgcccattcctcaggaggtccacgtagat
gctatcatcgaggatagtgatgcaacttatttcattttggacaatgttgagaacgaagta
gttattcaggacacgcctaatgtgcgatgtgagcaaattacagacggagaagtgctgcaa
tacaccgggcttaatctgtcacaactgtga
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