Crassostrea virginica (eastern oyster): 111118342
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Entry
111118342 CDS
T09197
Name
(RefSeq) AP-5 complex subunit zeta-1-like isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111118342
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
111118342
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_AP5Z1_C
TPR_AP5Z1
SPG48
Motif
Other DBs
NCBI-GeneID:
111118342
NCBI-ProteinID:
XP_022313457
UniProt:
A0A8B8CCF7
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Position
2:complement(17150536..17160292)
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AA seq
799 aa
AA seq
DB search
MALSMIESLFSQASITPQEEIDKICQGVLENLYAPDKSNECMNQLRQLYFILQASHTEPC
LPRNMISTLVNMVSSMDHDKTKECLLCEQILSELLPRNQDDLGSDFYPSSSHQKGTSSAN
CLLLYLMQGNRNCCLVDVIPHAVRWMSSGKEDYNVQRQAFSFLVSLQVLHNKLVTEETMK
TVNTTASNWLMNASLYQLPNPYTINPFKKDQTPVVNEVDGTPSRNFFTVLNVGQYYTNDQ
FLNIYCFSMLYKWLYHARFNSEEVSDNVSKSAQVFNSLVDKSIDYCFRILDQCERKSKVP
SDTELQNCCLLEVVNILDMICKIEPGKVAGVFQEIRRLYNKLMQELDKPRLLVPILQFFL
NHGKTPHLHGKFYGNTPLLPNKGKSVEHDPQEAYTLFFHKLLTQWYLDPAFSFDTITFIK
DNLDTLCHNTSILSTYFPNILKMLAWNPRSYLADFEDILPALMSPSTAIEVFHMLLDLPC
VTVALEITERCKKSEIQTLSSEAEPTNSLSAFQSALYRPMFNFFTRVEGGHGDTINRLSL
FHNILADMNQHPRVLVCSQIVPVLLRVWFDVILEDASSEFLSHLIPVLLERTAMLYNIPG
YQADVRKVLAEYVVHLLKKYPGILLDQASEIRDFLSSPRNISDREEFFANLVWCVGELCS
DRHDDRCTAEAITRFFDTLEVLTYELSGMASAKEEISNSSKIICMLISAISKLASKCQDL
IPRSILLLTKVAKQQQASYLDTETKDALVGRAQELINLLKLPNFANVVLNPSDEIETGRW
HRDNTSLPITLRGIQHILS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctccatgatagaaagtctattttcacaagcaagtataactcctcaagaagaa
attgacaagatttgccaaggcgttctcgagaacttatatgcacctgataaatctaatgaa
tgtatgaatcagctgaggcaactttatttcattcttcaggcttcacacactgaaccatgt
ttaccaagaaacatgatatcaacattggttaacatggtgagttcaatggaccatgacaaa
accaaagaatgtctcctctgtgaacagatcctgtctgagcttttacccaggaatcaggat
gacctggggtcagatttttatccaagctcaagtcatcaaaagggtacttcctcagccaac
tgtcttttactttatttaatgcagggaaacagaaattgttgtctggttgatgttattcca
catgctgtaaggtggatgtcctccgggaaggaggactacaatgttcagcgacaggccttc
tccttccttgtgtctcttcaggttctgcacaacaaactggtaactgaagagactatgaag
acagtgaacaccacagctagcaactggttgatgaatgcctctctttaccagctgccaaat
ccttacacaatcaacccattcaaaaaggaccagacccctgttgtgaatgaagttgatgga
acacctagtagaaatttcttcaccgtacttaatgttggtcaatattacacaaatgaccag
ttccttaatatatactgcttttctatgttgtacaaatggctgtatcatgcaagattcaat
agtgaggaggtttcagacaatgtcagcaaaagtgctcaagtatttaacagtctggtagac
aagtccattgattactgcttccgaattttagaccagtgtgaaagaaaatccaaagttccg
tcggacacagaactgcaaaactgttgccttttggaagtggtgaatattttggacatgatt
tgtaagattgaaccagggaaggttgctggagtgttccaggaaatccgccgtttgtataac
aaactgatgcaggaattggataaacctcgactccttgttccaattctacaattcttcctt
aaccatggtaaaacaccacacctccatggtaaattctatgggaatacaccgttactacca
aataaaggtaagagtgtggagcatgacccccaggaggcttataccctcttcttccacaag
ctcttgactcagtggtacttggacccagccttcagctttgacaccatcaccttcatcaaa
gacaacttagacactctctgtcacaacacctccatactgtccacgtatttccccaacatc
ttgaagatgttggcttggaatcctagatcatatcttgctgattttgaagatattctacca
gcactgatgtctccaagcacagcaatagaggttttccacatgcttcttgatttgccctgt
gtcacagttgccttagaaatcactgagcgctgcaagaagagtgagattcagaccttatcc
agtgaagcagagccgaccaattcactttcagcattccagagcgccctctacaggccaatg
tttaacttcttcacgcgtgtggagggagggcatggtgacactatcaacagattgtccctc
tttcacaacattctggcagacatgaatcaacatcctcgcgtactagtgtgctctcagatt
gtacctgttttactgagggtgtggtttgatgtaatactggaagatgcttcctctgagttt
ttgagccatttgattcctgttcttctggagaggacagccatgttgtacaacattcctggt
tatcaagcagacgtccgaaaagtgttggctgagtatgtggttcaccttctcaagaaatat
ccaggaatactactggatcaggcctcagaaatccgagatttcctgagcagccccaggaat
atatctgacagagaggaattctttgcaaatttggtctggtgtgtgggtgagctgtgctca
gacaggcatgatgacagatgcacagcagaggcaatcaccagattttttgatacgcttgag
gtgctgacatacgagctctcaggaatggcttcagcgaaagaggaaatttctaattcatca
aagattatatgcatgttaatatctgccatctcaaagctggcttccaagtgtcaagatttg
attcctcggtcaatcttgcttttgaccaaagttgctaagcaacaacaagctagctacttg
gatacagaaaccaaagatgcattggttggcagagcacaggaattgatcaacctcctgaaa
cttccaaattttgccaatgttgtgttgaaccccagtgatgagatagagactggcagatgg
cacagggacaacacaagcttaccaatcactctccgaggcattcagcacattttgtcatag
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